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KJC3_003546-T1, KJC3_003546-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003546-T1
Unique NameKJC3_003546-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2224788..2227113-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003546-T1 ID=KJC3_003546-T1|Name=KJC3_003546-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2326bp|location=Sequence derived from alignment at ch3:2224788..2227113- (Aspergillus niger KJC3)
CTTCCTTCTGTCGTTTTCTGTTGGAAAAACCACTTATGACCAGAATATTA
TTTCCCATAGCCGAATGCTATCCAACTGTCACACAGTCCAAGCGTGCGGA
GGGCAACCAACCACCCGTCACCTGCGAACCGAAGGATCGACTAGACAAAT
TGCGGGGGTGGGGTAGTACTATGCGCCCCGGATTTGCTCATTTGTTCCGT
CTGCCGTGCCCCTCTCTGTTCTTCTTCATCCTCAGCTTCTCCTTATGGCG
GATATCATCCACACCCACGCAGCCATGACTTCCTACCAGCCATTCCAATG
CATGGTTTGTCTACGCCGTTTCACTCGACATGAGAACCTCAAACGACACG
CAGCACTTCATTCCCGCTCTCGAAAGGAAATCACCTTGCCGTGTGACTTG
TGCCAGGCTACCTTTTCGCGTCCGGACTTGCGCCATCGCCATATGAAGAG
GAAACATGCAGAGCACGAGCAAAGACGAGCGACGAAGAGGCCAAAGCAAA
GGGATAGCTATGCTACCCTATGCCAGGATACTGGCCAGCATCGTGGGCAA
CTGCAGAATGTCGATGACCTGCAGTTAGATAGGTCTTGTTGGACGTCTGA
TCTTTCGCAAATACACTACGAGGATGGACATGACCCAGATGCAGGAGGAA
CCAGCACTGCGTCCAGCACATCACCCATAGAAAACAGCGATCGTATCCAG
TCTGTTCCAGGTAATCCGACGCAACATATACCAATGGACGAGTCTCGTTT
GCTAGATGCGTTAGAACTGGAGCGTAGCCTGTTACGCGAAACATCACTTC
CCCAACCAACCGATCAACTCAGCACCCAGCCGCTCGCGATATCCAATCTA
CAGTCTCCGTCGGACATTGACCTCGGCGACCTCAGCTTTCCCAAAGATCT
CTCTGTTATCCCTATTGCGCCCGAGAGCACCCAGCCCCAAAACAGCTGGT
TTCCTTCCGCCTCACAAATCCGCGAGGGCTGCAGCTTATTCTTCACCCAT
GTCTCGCACTTTCTTCCATTTCTACACCACCCAACATTCGACCCCAGTGC
CATACCCTCCCACCTCCTCCTCGCCATGCTCTCCCTCTCATACCAATACG
GCGAAGACCCGGAATGCGATGCCCGCACGGGCACGGGCACAAGCCTCTCC
ACCCGCTGCTACCTCCGCGCCCGCTCCAGCCTCTCCTCCAGCAACCACCC
TAACTCTACCATCACCGACCACCTCTCCCTAGTGCAAACCTACCTCCTCC
TCCAAATCTGCGCCATGATGTACCTCTGCGGCTCCGACTCGACCCAAGGC
CTCCAAATGCACGCGACCATGATATCCCTCGCGCGCTCCACAGGCCTCAT
GCAGCCCATAACCACCGAATGTGCACACACCTTGGACCTCGACTCCCTGT
GGAAAGAATTCATCAAAGCCGAATCCCACAAACGGACCCTCTTCGCCGTT
CACCAAATCGACGCACTCTGGTACCAACTCCTCTCCATCCCACGCGCCAT
CTCCCACCTCGAAATCAAACACGATCTGCCCTGTCCAGAAACCCACTGGA
CCGCCCCCTCCGCCGCCCAATGGGCCCATCTCCAACTCATCTCCCAACAA
CAACATCATAAACACCCAACCAGTATGCGCTACGACGACGCAGTCCGGCA
CTTCCTCTCCTCATCTACAGATTCCACATCTTCGATCCCCCCCTTCGACC
CCTACGGCGCCATCAACATCACCCACTTCCTGATCTCCAGCGCGCGCGAA
ATCTCCGGCTGGTCTACCATGACCGGCATGCTGAGCATGGAACGGTTCTC
CGCTCTACGGTCGTCTCTCCTGTCTTTGGGAGTGTTTCTTTCCCCAACAC
CAACACCAACACCGACGCCCTCTACTACCTATAACGCTAAATCCGCCCAC
ACCACCGCAACCTGGCAAACAGCCATGATCGAGCTACAGATGTGGTCTCC
CAGCCACACAGGCGGCATCGTCAAAGCCAGTATCGACACCATGCTCCAGC
AGGCGACGGAGTTGGCGCCCTCGGCGTGTGAGTTCCTGTGTGAGGAGACA
GCGAAGGCGTTCCAGCCGCATGTGGATTGGTTTCTGACCTATTTGGAGGA
GGGGGATGTGGAGGGAGAGGCGCCGTGGGTGACACTGTATGCGTATAAGG
CGTTTTTGGTCGCGTGGCAGTTGGTTAGAGGGGGTGTGCCGGGGGCGATG
GGGGTGGTGGGAGTGGGGGATGGGGATGTGCGCGGTGCGGTGGAGTGGGC
TAGGAGGGTGTTTGCTAGGAGGGAGAGGTGGGTTATTGGGAGGTTGGTTT
TGGGGTGTTTGGGGGGTTTAGATTGA
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Coding sequence (CDS) from alignment at ch3:2224788..2227113-

>KJC3_003546-T1 ID=KJC3_003546-T1|Name=KJC3_003546-T1|organism=Aspergillus niger KJC3|type=CDS|length=2082bp|location=Sequence derived from alignment at ch3:2224788..2227113- (Aspergillus niger KJC3)
ATGGCGGATATCATCCACACCCACGCAGCCATGACTTCCTACCAGCCATT
CCAATGCATGGTTTGTCTACGCCGTTTCACTCGACATGAGAACCTCAAAC
GACACGCAGCACTTCATTCCCGCTCTCGAAAGGAAATCACCTTGCCGTGT
GACTTGTGCCAGGCTACCTTTTCGCGTCCGGACTTGCGCCATCGCCATAT
GAAGAGGAAACATGCAGAGCACGAGCAAAGACGAGCGACGAAGAGGCCAA
AGCAAAGGGATAGCTATGCTACCCTATGCCAGGATACTGGCCAGCATCGT
GGGCAACTGCAGAATGTCGATGACCTGCAGTTAGATAGGTCTTGTTGGAC
GTCTGATCTTTCGCAAATACACTACGAGGATGGACATGACCCAGATGCAG
GAGGAACCAGCACTGCGTCCAGCACATCACCCATAGAAAACAGCGATCGT
ATCCAGTCTGTTCCAGGTAATCCGACGCAACATATACCAATGGACGAGTC
TCGTTTGCTAGATGCGTTAGAACTGGAGCGTAGCCTGTTACGCGAAACAT
CACTTCCCCAACCAACCGATCAACTCAGCACCCAGCCGCTCGCGATATCC
AATCTACAGTCTCCGTCGGACATTGACCTCGGCGACCTCAGCTTTCCCAA
AGATCTCTCTGTTATCCCTATTGCGCCCGAGAGCACCCAGCCCCAAAACA
GCTGGTTTCCTTCCGCCTCACAAATCCGCGAGGGCTGCAGCTTATTCTTC
ACCCATGTCTCGCACTTTCTTCCATTTCTACACCACCCAACATTCGACCC
CAGTGCCATACCCTCCCACCTCCTCCTCGCCATGCTCTCCCTCTCATACC
AATACGGCGAAGACCCGGAATGCGATGCCCGCACGGGCACGGGCACAAGC
CTCTCCACCCGCTGCTACCTCCGCGCCCGCTCCAGCCTCTCCTCCAGCAA
CCACCCTAACTCTACCATCACCGACCACCTCTCCCTAGTGCAAACCTACC
TCCTCCTCCAAATCTGCGCCATGATGTACCTCTGCGGCTCCGACTCGACC
CAAGGCCTCCAAATGCACGCGACCATGATATCCCTCGCGCGCTCCACAGG
CCTCATGCAGCCCATAACCACCGAATGTGCACACACCTTGGACCTCGACT
CCCTGTGGAAAGAATTCATCAAAGCCGAATCCCACAAACGGACCCTCTTC
GCCGTTCACCAAATCGACGCACTCTGGTACCAACTCCTCTCCATCCCACG
CGCCATCTCCCACCTCGAAATCAAACACGATCTGCCCTGTCCAGAAACCC
ACTGGACCGCCCCCTCCGCCGCCCAATGGGCCCATCTCCAACTCATCTCC
CAACAACAACATCATAAACACCCAACCAGTATGCGCTACGACGACGCAGT
CCGGCACTTCCTCTCCTCATCTACAGATTCCACATCTTCGATCCCCCCCT
TCGACCCCTACGGCGCCATCAACATCACCCACTTCCTGATCTCCAGCGCG
CGCGAAATCTCCGGCTGGTCTACCATGACCGGCATGCTGAGCATGGAACG
GTTCTCCGCTCTACGGTCGTCTCTCCTGTCTTTGGGAGTGTTTCTTTCCC
CAACACCAACACCAACACCGACGCCCTCTACTACCTATAACGCTAAATCC
GCCCACACCACCGCAACCTGGCAAACAGCCATGATCGAGCTACAGATGTG
GTCTCCCAGCCACACAGGCGGCATCGTCAAAGCCAGTATCGACACCATGC
TCCAGCAGGCGACGGAGTTGGCGCCCTCGGCGTGTGAGTTCCTGTGTGAG
GAGACAGCGAAGGCGTTCCAGCCGCATGTGGATTGGTTTCTGACCTATTT
GGAGGAGGGGGATGTGGAGGGAGAGGCGCCGTGGGTGACACTGTATGCGT
ATAAGGCGTTTTTGGTCGCGTGGCAGTTGGTTAGAGGGGGTGTGCCGGGG
GCGATGGGGGTGGTGGGAGTGGGGGATGGGGATGTGCGCGGTGCGGTGGA
GTGGGCTAGGAGGGTGTTTGCTAGGAGGGAGAGGTGGGTTATTGGGAGGT
TGGTTTTGGGGTGTTTGGGGGGTTTAGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003546KJC3_003546Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003546-T1.cdsKJC3_003546-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003546-T1.exon1KJC3_003546-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003546-T1.utr5p1KJC3_003546-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003546-T1KJC3_003546-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR013087
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2224788..2227113 -
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