|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2257644..2258370- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003554-T1 ID=KJC3_003554-T1|Name=KJC3_003554-T1|organism=Aspergillus niger KJC3|type=mRNA|length=727bp|location=Sequence derived from alignment at ch3:2257644..2258370- (Aspergillus niger KJC3)
TGTTCCTTCTCCTGAACAGAATCCCCTCATCTAACCCTCACCGTCAAAAT
GGCATTCGCTTGGAAAGCTGCTGGTCTCACGTATGATATTCTTTTGCTCT
TGATTGTTTTGCTTGCTCTGGACCTCTGACTGACGTCTTGGTTGACTTTT
ACAGCTACAACCGCTACTTGACCGTTGCCGCTCGCGCGGTCCGCAGGTCT
CTCAAGGACGGTCCCCGTGCTGCTGCTGAGCGCCGCGGAAACATGGACTT
GCGTTTCGCCAAGTGGGAGGTTCGTATATAAAATCCTGACATACCCTTCG
CCAAGTGCAATGGATGAAGACGGTTTGGACTGACCATCGGGTTCCGGATA
TAGAACGGCAAGCAGGGTGAAGTCAAGTCCCTCGCCAAGGCCAACGATGA
GGCTCTTGCTGCTCAGGCCGAGTCGAAATAAATACCCCGTCCCGAAAGTG
TGTGAAAGAAGTCCGGAAGATGTATTCTGGATGAAGGATGTTTGAGGTCT
CGGGTGGAAGCCATGGGCAGGAATGGGATAGATCTCTGTAGCATATTGGC
CCCTTTGATCAGGTCTAAATAGAAAAGAACTATTTCTTCCTGCCGCTCTT
CTCTAGCTGGATAGCAGGCCCGCTTATTCACAATGTAGTTCTTGTGCCTG
CGAGAGCATGGGTTCCTGAACTCGACGGCTCTGCTTGAGCGCGTGCGGCT
TGTGTTCCCGCAAGTTTTGCCCTGTCC back to topCoding sequence (CDS) from alignment at ch3:2257644..2258370- >KJC3_003554-T1 ID=KJC3_003554-T1|Name=KJC3_003554-T1|organism=Aspergillus niger KJC3|type=CDS|length=675bp|location=Sequence derived from alignment at ch3:2257644..2258370- (Aspergillus niger KJC3)
AACGGCAAGCAGGGTGAAGTCAAGTCCCTCGCCAAGGCCAACGATGAGGC
TCTTGCTGCTCAGGCCGAGTCGAAATAACTACAACCGCTACTTGACCGTT
GCCGCTCGCGCGGTCCGCAGGTCTCTCAAGGACGGTCCCCGTGCTGCTGC
TGAGCGCCGCGGAAACATGGACTTGCGTTTCGCCAAGTGGGAGATGGCAT
TCGCTTGGAAAGCTGCTGGTCTCACAACGGCAAGCAGGGTGAAGTCAAGT
CCCTCGCCAAGGCCAACGATGAGGCTCTTGCTGCTCAGGCCGAGTCGAAA
TAACTACAACCGCTACTTGACCGTTGCCGCTCGCGCGGTCCGCAGGTCTC
TCAAGGACGGTCCCCGTGCTGCTGCTGAGCGCCGCGGAAACATGGACTTG
CGTTTCGCCAAGTGGGAGATGGCATTCGCTTGGAAAGCTGCTGGTCTCAC
AACGGCAAGCAGGGTGAAGTCAAGTCCCTCGCCAAGGCCAACGATGAGGC
TCTTGCTGCTCAGGCCGAGTCGAAATAACTACAACCGCTACTTGACCGTT
GCCGCTCGCGCGGTCCGCAGGTCTCTCAAGGACGGTCCCCGTGCTGCTGC
TGAGCGCCGCGGAAACATGGACTTGCGTTTCGCCAAGTGGGAGATGGCAT
TCGCTTGGAAAGCTGCTGGTCTCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015986 | ATP synthesis coupled proton transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003554-T1.utr3p1 | KJC3_003554-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003554-T1.utr5p1 | KJC3_003554-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006721 |
| DBxref | InterPro:IPR036742 |
| DBxref | PFAM:PF04627 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2257644..2258370 - |
|
