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KJC3_003558-T1, KJC3_003558-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003558-T1
Unique NameKJC3_003558-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2269308..2271140+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003558-T1 ID=KJC3_003558-T1|Name=KJC3_003558-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1833bp|location=Sequence derived from alignment at ch3:2269308..2271140+ (Aspergillus niger KJC3)
ATGGAGGACAACGCGGAACTCGAGTCGTTTCGGCGCCAGTGGCGTGAAGA
AGTTGCGCGCCGGGTGAAGCCATCGAGACCTCAACCAGCGCAGCCCAGGC
AAACAAAGTCCACCGCAACCTCGTCGAGCCATATCCCGCCTACCCACCAC
GAAGTATCGGAGCGCAGGGAAGAGGAAGACGGAGGAGTGGCACCGGTCGA
TCATAGTGAGATTGTTCATGGAGTCGGTCATTTGAGCTTAGGGGTAGCGG
ATGAGGATGTGTTTCACTCGCGAGTACCTCGAAGTGAGCCCAAGTCTGCA
TTGGAGCACTTTGAAAGAGCGGTCGAGAAGGAAGCCGAGGGGAATCTCGG
AGACAGTCTGCAACATTATCGCAAAGCTTACCGCGTAAGTAAATATCTTC
GCTATACCAAGGGAGCTCTCTCTGACAATGCTGGGTACAGTTAGATGCAG
CGGTCGACAAGACGTATAGAAACAAACATTTCGCCTGGGCATGGAAGAAG
GGTGCCCAGCCACCTGCTGCCAATGCTGCGGCCATCAATGCCACGGCAAC
ACAACCAGCTGCAGATGAACCCGAAATTATACCCACCCCGGAACTCATCG
CTTCATTCGCTCATCTTCCTATCCCGCAGGCGGAGCCCCTGATCGAAAAT
ACTCCTCCGCCCCCTTGTCCCATCTCGAAGGTCCCGTCCGAGGTGCTGGT
CGAAATCTTGAGGCATGTGGCTGTGATAGATCCGGCCTCGTTTTGTCGGA
TGGCGCTCGTTTGTAAGAGATTGGCATATCACTTTGCACATGAACAGCAC
ATCTGGAAACGCCTTTGCCAGGGCTCCGAGTTCGGATTCAAGGCCATGCA
CTATTCATTTGCTTGTGATGTCCATGGCATACCGGAGTACACCTTAGGGC
CACGCTACACGCCTTTTCCTCGATCAATGCCCGTTCAAATCCCGGAACCA
TTATCATCCTGGGCGGAAGTATTCCAGATATTCCCTCGGATTCGGTTTAC
GGGCATCTACATAAGCACTGTGAACTACACCCGTCCAGGTGCAGCCTCGG
TGTACCAGAACACCTCGTGGAACAGCCCCATCCACATTGTGACCTACTAC
CGCTATCTCCGCTTCTACCCAGACGGGACAGTCATTTACCTACTCACCAC
AGTCGAGCCATTGGAGGTTGTGCCCTACATCAGCAAGGAGAACGTCAAGG
CTGCACGGGCAATTTCCCAGAAGCAATTCCATCGTCAAATGGCAGACCCA
GGCAATACCATTACGGGTCCTACCGATACCATTCCTCCCATTGCTATGGG
TGCGCTGAGGCAAGCTTACCGAGGTCGCTGGCGCTTGGCCAAACCGGCTC
CCGCCTCTGATTCAGCCGACGACGTTCCCCAAGACGATCTTATCTCCGGA
TACGAATCTTTGCCCGTCAAGGCTCAATCGGCAGGCGCGCCACCTGACCC
TCGCGACCTGGTCATTGAAACCGAGGGAGTTGGACCGAAATACATGTACC
TCTTGCACCTCTCGCTTCGGTCGGTGTCAGCTCCCAAACCTACCAACGCT
AACATGACGCCACCCAACCCGTCCAAGAACACCAAGCTGGCCTGGAAGGG
CTATTGGAGTTACAACAGGCTCACTGACGACTGGGCTGAATTTGGACTCA
AGAACGACCGGGCGTTTGTTTTCCGACGAGTGCGCGGCTGGGGCATGAAT
TGAACGTAGGATATAGAGGTAATATGAACGGTAAAAAAGTATTGGGATAT
AGGAACAATAAAGCGGCTATATATAGCCAAACAGAAATGACAGATATGCT
AGATTTGAATGAATTTGACATGATATCACGAGA
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Coding sequence (CDS) from alignment at ch3:2269308..2271140+

>KJC3_003558-T1 ID=KJC3_003558-T1|Name=KJC3_003558-T1|organism=Aspergillus niger KJC3|type=CDS|length=3294bp|location=Sequence derived from alignment at ch3:2269308..2271140+ (Aspergillus niger KJC3)
ATGGAGGACAACGCGGAACTCGAGTCGTTTCGGCGCCAGTGGCGTGAAGA
AGTTGCGCGCCGGGTGAAGCCATCGAGACCTCAACCAGCGCAGCCCAGGC
AAACAAAGTCCACCGCAACCTCGTCGAGCCATATCCCGCCTACCCACCAC
GAAGTATCGGAGCGCAGGGAAGAGGAAGACGGAGGAGTGGCACCGGTCGA
TCATAGTGAGATTGTTCATGGAGTCGGTCATTTGAGCTTAGGGGTAGCGG
ATGAGGATGTGTTTCACTCGCGAGTACCTCGAAGTGAGCCCAAGTCTGCA
TTGGAGCACTTTGAAAGAGCGGTCGAGAAGGAAGCCGAGGGGAATCTCGG
AGACAGTCTGCAACATTATCGCAAAGCTTACCGCTTAGATGCAGCGGTCG
ACAAGACGTATAGAAACAAACATTTCGCCTGGGCATGGAAGAAGGGTGCC
CAGCCACCTGCTGCCAATGCTGCGGCCATCAATGCCACGGCAACACAACC
AGCTGCAGATGAACCCGAAATTATACCCACCCCGGAACTCATCGCTTCAT
TCGCTCATCTTCCTATCCCGCAGGCGGAGCCCCTGATCGAAAATACTCCT
CCGCCCCCTTGTCCCATCTCGAAGGTCCCGTCCGAGGTGCTGGTCGAAAT
CTTGAGGCATGTGGCTGTGATAGATCCGGCCTCGTTTTGTCGGATGGCGC
TCGTTTGTAAGAGATTGGCATATCACTTTGCACATGAACAGCACATCTGG
AAACGCCTTTGCCAGGGCTCCGAGTTCGGATTCAAGGCCATGCACTATTC
ATTTGCTTGTGATGTCCATGGCATACCGGAGTACACCTTAGGGCCACGCT
ACACGCCTTTTCCTCGATCAATGCCCGTTCAAATCCCGGAACCATTATCA
TCCTGGGCGGAAGTATTCCAGATATTCCCTCGGATTCGGTTTACGGGCAT
CTACATAAGCACTGTGAACTACACCCGTCCAGGTGCAGCCTCGGTGTACC
AGAACACCTCGTGGAACAGCCCCATCCACATTGTGACCTACTACCGCTAT
CTCCGCTTCTACCCAGACGGGACAGTCATTTACCTACTCACCACAGTCGA
GCCATTGGAGGTTGTGCCCTACATCAGCAAGGAGAACGTCAAGGCTGCAC
GGGCAATTTCCCAGAAGCAATTCCATCGTCAAATGGCAGACCCAGGCAAT
ACCATTACGGGTCCTACCGATACCATTCCTCCCATTGCTATGGGTGCGCT
GAGGCAAGCTTACCGAGGTCGCTGGCGCTTGGCCAAACCGGCTCCCGCCT
CTGATTCAGCCGACGACGTTCCCCAAGACGATCTTATCTCCGGATACGAA
TCTTTGCCCGTCAAGGCTCAATCGGCAGGCGCGCCACCTGACCCTCGCGA
CCTGGTCATTGAAACCGAGGGAGTTGGACCGAAATACATGTACCTCTTGC
ACCTCTCGCTTCGGTCGGTGTCAGCTCCCAAACCTACCAACGCTAACATG
ACGCCACCCAACCCGTCCAAGAACACCAAGCTGGCCTGGAAGGGCTATTG
GAGTTACAACAGGCTCACTGACGACTGGGCTGAATTTGGACTCAAGAACG
ACCGGGCGTTTGTTTTCCGACGAGTGCGCGGCTGGGGCATGAATTGAATG
GAGGACAACGCGGAACTCGAGTCGTTTCGGCGCCAGTGGCGTGAAGAAGT
TGCGCGCCGGGTGAAGCCATCGAGACCTCAACCAGCGCAGCCCAGGCAAA
CAAAGTCCACCGCAACCTCGTCGAGCCATATCCCGCCTACCCACCACGAA
GTATCGGAGCGCAGGGAAGAGGAAGACGGAGGAGTGGCACCGGTCGATCA
TAGTGAGATTGTTCATGGAGTCGGTCATTTGAGCTTAGGGGTAGCGGATG
AGGATGTGTTTCACTCGCGAGTACCTCGAAGTGAGCCCAAGTCTGCATTG
GAGCACTTTGAAAGAGCGGTCGAGAAGGAAGCCGAGGGGAATCTCGGAGA
CAGTCTGCAACATTATCGCAAAGCTTACCGCTTAGATGCAGCGGTCGACA
AGACGTATAGAAACAAACATTTCGCCTGGGCATGGAAGAAGGGTGCCCAG
CCACCTGCTGCCAATGCTGCGGCCATCAATGCCACGGCAACACAACCAGC
TGCAGATGAACCCGAAATTATACCCACCCCGGAACTCATCGCTTCATTCG
CTCATCTTCCTATCCCGCAGGCGGAGCCCCTGATCGAAAATACTCCTCCG
CCCCCTTGTCCCATCTCGAAGGTCCCGTCCGAGGTGCTGGTCGAAATCTT
GAGGCATGTGGCTGTGATAGATCCGGCCTCGTTTTGTCGGATGGCGCTCG
TTTGTAAGAGATTGGCATATCACTTTGCACATGAACAGCACATCTGGAAA
CGCCTTTGCCAGGGCTCCGAGTTCGGATTCAAGGCCATGCACTATTCATT
TGCTTGTGATGTCCATGGCATACCGGAGTACACCTTAGGGCCACGCTACA
CGCCTTTTCCTCGATCAATGCCCGTTCAAATCCCGGAACCATTATCATCC
TGGGCGGAAGTATTCCAGATATTCCCTCGGATTCGGTTTACGGGCATCTA
CATAAGCACTGTGAACTACACCCGTCCAGGTGCAGCCTCGGTGTACCAGA
ACACCTCGTGGAACAGCCCCATCCACATTGTGACCTACTACCGCTATCTC
CGCTTCTACCCAGACGGGACAGTCATTTACCTACTCACCACAGTCGAGCC
ATTGGAGGTTGTGCCCTACATCAGCAAGGAGAACGTCAAGGCTGCACGGG
CAATTTCCCAGAAGCAATTCCATCGTCAAATGGCAGACCCAGGCAATACC
ATTACGGGTCCTACCGATACCATTCCTCCCATTGCTATGGGTGCGCTGAG
GCAAGCTTACCGAGGTCGCTGGCGCTTGGCCAAACCGGCTCCCGCCTCTG
ATTCAGCCGACGACGTTCCCCAAGACGATCTTATCTCCGGATACGAATCT
TTGCCCGTCAAGGCTCAATCGGCAGGCGCGCCACCTGACCCTCGCGACCT
GGTCATTGAAACCGAGGGAGTTGGACCGAAATACATGTACCTCTTGCACC
TCTCGCTTCGGTCGGTGTCAGCTCCCAAACCTACCAACGCTAACATGACG
CCACCCAACCCGTCCAAGAACACCAAGCTGGCCTGGAAGGGCTATTGGAG
TTACAACAGGCTCACTGACGACTGGGCTGAATTTGGACTCAAGAACGACC
GGGCGTTTGTTTTCCGACGAGTGCGCGGCTGGGGCATGAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003558KJC3_003558Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003558-T1.exon1KJC3_003558-T1.exon1Aspergillus niger KJC3exon
KJC3_003558-T1.exon2KJC3_003558-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003558-T1.cdsKJC3_003558-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003558-T1.utr3p1KJC3_003558-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003558-T1KJC3_003558-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261FAB
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2269308..2271140 +
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