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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2276881..2278391- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003560-T1 ID=KJC3_003560-T1|Name=KJC3_003560-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1511bp|location=Sequence derived from alignment at ch3:2276881..2278391- (Aspergillus niger KJC3)
CATGATCGCGCCTTTAGGCACACAGCCTACTTACTTTGTACAATCTCCAG
TAGGAGTTAGCACTGAATCTGCCGGACGTCCCTTGCCACGGACCATTTGC
ACGCCCCCACTTGCCGCCAGTCGAACCGGAGTGAAGCTATTCAGTTCCCA
CTTGTCATATCCATTACAGATTGTTCACCACGTCCGCGTCTTCGGTGCTC
TGTATGGCTCTTTCCTTTGTGGAATGACAGGCTGTGACTCAGAACCGAAG
TTACAGTTAGTCGATGCGCTAATCGGGTGCTGATAGATCCACTCGTCATC
TTTGGGCGCTTTAGCACCATGCGACCTGTTCGGCTGGGCTCTACACGAAT
AAACCCAGGGGTGCCATCCAGGGTTCACCTGAAAGTACATATAAAGAGTA
AGTACTATCGCCCTGCCCTACCTTTTGTAGTCCTCTTGAGTCCTTGCGCA
AACCTAGAATCTCCTTGATATCAATACTACTTGCACATATCGTTCATGAT
GATCCTCGACAGTCCACCTCCCACTTTCTCGACCCTCTCTCTAACGGTCA
ATGACCATCCCCTCAAGCTCTCCACCCTCTATCGCCCCGGGCCGAAACCC
GCCATCCTCTTCCTCCACGGATTTGGCTCTTGCAAAGAAGATCTTCACGA
TCTGGTCTACCTTCCTTCTCTACGAGACCACACCTTGATCGCCTACGATG
CACCGGGCTGCGGTGCCTCTGAATCCCATGGTCCCAGCAGCGATCTGACC
ATCACCTTCCTCGTGGCCACCGCTGAAGCTGTGCTCAAGCAATTCCACAT
CACCACCTTCTATCTGATCGGGCACTCCACCGGCGCTCTGACAGGCCTCA
TGCTCGCCGCCTCTCTTCCCCCCACACAATACCAACTGCTCGCCTTCATC
AACATCGAAGGCACCCTCTCGCCAGAGAACTGCTTCTTCCCCCGCTCTCT
TTACACCGACCTCGTCAAATCCTCCCCCTCCTCCACCCCCGAAGACGACC
TCCAGAAACTCATTGCCCACGTCCACTCCACCCCAGGCTACTCACACGCT
CTCTACGCCTCATTACTGCCCTCCCGCGTGCGCCCCGAAGCCGTCCGACC
CATCGTCACATCTACCGTCGAGCTCTCATGGAAGAACCTCCTAGGACGCT
TCCTCCGATTATCCTGCCCACTCATGTACTTGTTCGGGGACCAGAACCGC
GAAGTGTCATTTCTGAGTCAATTAGAGACGAAAGGGGTCGAGCTGGCGCA
GATCCCCACGAGTGGACACTTCCCGATGTACTCCAACCCGGCGAAGATGT
CACGGCGCATCGAGGGATTTTTCCGGGACTGTACTTACGCTGGCAGTAGC
AGTAGTGGCAGTGGTAGGAGTTTCTAGCAGTGCAACAGTTTTTACTGGAG
TTTCGATTCGATTTTTGTTAGATAGATACCTCGATACGATGTCTCATGAT
GATTACCCACTACTCACTTACATACCATTTAGACAAGCAATGTGATATTT
TCTGTGAATTT back to topCoding sequence (CDS) from alignment at ch3:2276881..2278391- >KJC3_003560-T1 ID=KJC3_003560-T1|Name=KJC3_003560-T1|organism=Aspergillus niger KJC3|type=CDS|length=882bp|location=Sequence derived from alignment at ch3:2276881..2278391- (Aspergillus niger KJC3)
ATGATGATCCTCGACAGTCCACCTCCCACTTTCTCGACCCTCTCTCTAAC
GGTCAATGACCATCCCCTCAAGCTCTCCACCCTCTATCGCCCCGGGCCGA
AACCCGCCATCCTCTTCCTCCACGGATTTGGCTCTTGCAAAGAAGATCTT
CACGATCTGGTCTACCTTCCTTCTCTACGAGACCACACCTTGATCGCCTA
CGATGCACCGGGCTGCGGTGCCTCTGAATCCCATGGTCCCAGCAGCGATC
TGACCATCACCTTCCTCGTGGCCACCGCTGAAGCTGTGCTCAAGCAATTC
CACATCACCACCTTCTATCTGATCGGGCACTCCACCGGCGCTCTGACAGG
CCTCATGCTCGCCGCCTCTCTTCCCCCCACACAATACCAACTGCTCGCCT
TCATCAACATCGAAGGCACCCTCTCGCCAGAGAACTGCTTCTTCCCCCGC
TCTCTTTACACCGACCTCGTCAAATCCTCCCCCTCCTCCACCCCCGAAGA
CGACCTCCAGAAACTCATTGCCCACGTCCACTCCACCCCAGGCTACTCAC
ACGCTCTCTACGCCTCATTACTGCCCTCCCGCGTGCGCCCCGAAGCCGTC
CGACCCATCGTCACATCTACCGTCGAGCTCTCATGGAAGAACCTCCTAGG
ACGCTTCCTCCGATTATCCTGCCCACTCATGTACTTGTTCGGGGACCAGA
ACCGCGAAGTGTCATTTCTGAGTCAATTAGAGACGAAAGGGGTCGAGCTG
GCGCAGATCCCCACGAGTGGACACTTCCCGATGTACTCCAACCCGGCGAA
GATGTCACGGCGCATCGAGGGATTTTTCCGGGACTGTACTTACGCTGGCA
GTAGCAGTAGTGGCAGTGGTAGGAGTTTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003560-T1.utr3p1 | KJC3_003560-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003560-T1.utr5p1 | KJC3_003560-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2276881..2278391 - |
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