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KJC3_003562-T1, KJC3_003562-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003562-T1
Unique NameKJC3_003562-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2284022..2285140-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003562-T1 ID=KJC3_003562-T1|Name=KJC3_003562-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1119bp|location=Sequence derived from alignment at ch3:2284022..2285140- (Aspergillus niger KJC3)
CAAAAGACGAGGCCGGAGCGCACTTCTCTCAACAACCACATTAAACCTTT
AGGTATGTGGTATTCTCCCGCAAGCCACGGCTGATTGCCCGTTATTTCGA
TCATGTTCAAAAAATATTTTTTGTCATGGCCAAAAAAGCGGTAGCATTCA
GTAGTGGGCTCTGAAATAGCGGAGTGAACAAATGCTGATTAAAATTGATC
ATGCAGAAGTTTAGTCTTCAGCGTAACGATGGCCCCCAAGAGCAAGAAGA
CCGGTGACACCATCAACTCGCGCCTGGCGCTTGTGATGAAGTCCGGAAAG
GGTATGTTATACCTGAAGGTGCCAGTTCAGATATTTTAGACAGTCTCTAA
TCGTGCCCATCTAGTCACCCTCGGCTACAAGTCCACCATCAAGACCCTCC
GCGTGAGTATACCGGCTATTTCAGGCAATAGCCGTGCAGAACATACATGA
ATGGTCGACTAATAACGTCAACAGTCCGGCAAGGCCAAGCTGGTCATCAT
CGCCGCCAACACTCCTCCTCTCCGCAAGAGTGAGCTCGAGTACTACGCCA
TGCTCGCCAAGGCCCCCGTCCACCACTTCTCCGGCAACAACGTGAGTGAC
TGCGATCAGATCATTGGCATCTCTATGGAGTGGGATCCGGACCTAGTTCT
GGATAGGCTACTTCCGTAGTGATCGCAACGTAAAACTGGAGTAAACGCTA
ACATTATGGTGAACAGATCGAGCTCGGTACCGCCTGCGGTAAGCTCTTCC
GCACCTCCACCATGGCTATCCTCGATGCTGGTGACTCCGACATCCTGTCC
AGCCAGTAGGTGTAAAGCCTAGTCAATGAATTCATGTTATGTCTGAACGG
CGGTATGCCATGATGCACAACGTCACGGCACGATTTAGATAATGACAATG
AACTTTACATCTATATTGGGTTTCGTTTCTAAACGCTGTAGGATAAGACT
GTAGGAGTGATCTGGAAGATAGCACGGTCGCATCACTAAAGAACCGGAGG
GAGAGTGGCAGCTCAACTCCACTTTATGAGTCACGTGATTAAAAGTCAGG
CATTTAGACAATTATAAAGCAGCGAAAAGTCATCACATTCCATTCCGCAG
TAACTAAAACATGTTTCAT
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Coding sequence (CDS) from alignment at ch3:2284022..2285140-

>KJC3_003562-T1 ID=KJC3_003562-T1|Name=KJC3_003562-T1|organism=Aspergillus niger KJC3|type=CDS|length=1284bp|location=Sequence derived from alignment at ch3:2284022..2285140- (Aspergillus niger KJC3)
ATCGAGCTCGGTACCGCCTGCGGTAAGCTCTTCCGCACCTCCACCATGGC
TATCCTCGATGCTGGTGACTCCGACATCCTGTCCAGCCAGTAGTCCGGCA
AGGCCAAGCTGGTCATCATCGCCGCCAACACTCCTCCTCTCCGCAAGAGT
GAGCTCGAGTACTACGCCATGCTCGCCAAGGCCCCCGTCCACCACTTCTC
CGGCAACAACTCACCCTCGGCTACAAGTCCACCATCAAGACCCTCCGCAT
GGCCCCCAAGAGCAAGAAGACCGGTGACACCATCAACTCGCGCCTGGCGC
TTGTGATGAAGTCCGGAAAGGATCGAGCTCGGTACCGCCTGCGGTAAGCT
CTTCCGCACCTCCACCATGGCTATCCTCGATGCTGGTGACTCCGACATCC
TGTCCAGCCAGTAGTCCGGCAAGGCCAAGCTGGTCATCATCGCCGCCAAC
ACTCCTCCTCTCCGCAAGAGTGAGCTCGAGTACTACGCCATGCTCGCCAA
GGCCCCCGTCCACCACTTCTCCGGCAACAACTCACCCTCGGCTACAAGTC
CACCATCAAGACCCTCCGCATGGCCCCCAAGAGCAAGAAGACCGGTGACA
CCATCAACTCGCGCCTGGCGCTTGTGATGAAGTCCGGAAAGGATCGAGCT
CGGTACCGCCTGCGGTAAGCTCTTCCGCACCTCCACCATGGCTATCCTCG
ATGCTGGTGACTCCGACATCCTGTCCAGCCAGTAGTCCGGCAAGGCCAAG
CTGGTCATCATCGCCGCCAACACTCCTCCTCTCCGCAAGAGTGAGCTCGA
GTACTACGCCATGCTCGCCAAGGCCCCCGTCCACCACTTCTCCGGCAACA
ACTCACCCTCGGCTACAAGTCCACCATCAAGACCCTCCGCATGGCCCCCA
AGAGCAAGAAGACCGGTGACACCATCAACTCGCGCCTGGCGCTTGTGATG
AAGTCCGGAAAGGATCGAGCTCGGTACCGCCTGCGGTAAGCTCTTCCGCA
CCTCCACCATGGCTATCCTCGATGCTGGTGACTCCGACATCCTGTCCAGC
CAGTAGTCCGGCAAGGCCAAGCTGGTCATCATCGCCGCCAACACTCCTCC
TCTCCGCAAGAGTGAGCTCGAGTACTACGCCATGCTCGCCAAGGCCCCCG
TCCACCACTTCTCCGGCAACAACTCACCCTCGGCTACAAGTCCACCATCA
AGACCCTCCGCATGGCCCCCAAGAGCAAGAAGACCGGTGACACCATCAAC
TCGCGCCTGGCGCTTGTGATGAAGTCCGGAAAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003562KJC3_003562Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003562-T1KJC3_003562-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003562-T1.cdsKJC3_003562-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003562-T1.utr3p1KJC3_003562-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003562-T1.exon5KJC3_003562-T1.exon5Aspergillus niger KJC3exon
KJC3_003562-T1.exon4KJC3_003562-T1.exon4Aspergillus niger KJC3exon
KJC3_003562-T1.exon3KJC3_003562-T1.exon3Aspergillus niger KJC3exon
KJC3_003562-T1.exon2KJC3_003562-T1.exon2Aspergillus niger KJC3exon
KJC3_003562-T1.exon1KJC3_003562-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003562-T1.utr5p2KJC3_003562-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003562-T1.utr5p1KJC3_003562-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR022991
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR004038
DBxrefPFAM:PF01248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2284022..2285140 -
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