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KJC3_003566-T1, KJC3_003566-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003566-T1
Unique NameKJC3_003566-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2295995..2297849+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003566-T1 ID=KJC3_003566-T1|Name=KJC3_003566-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1855bp|location=Sequence derived from alignment at ch3:2295995..2297849+ (Aspergillus niger KJC3)
AGTTCAGCAACCCAACAGAGTCGCCAATTGCTCATTTGTCTGGCAGCAAT
CGCTCGGGCCGTACACGACTGGTGGAGCAGCCTGACAGGAGGTCCCCGAA
TCAGGATTTGCCTATGACCGAATAGCCTCGAAACGCGCGATACCCGTTCT
CCTCTTCCCCCCACTACCGAGAAAATTGTATCGACTTAATCTACAAGCCC
TGACTCACCCCACGATCGCTCGTTCCTCTGCTCTGTTCGGGGAACGAATA
TCGCCTGCCAATCTGGTTCTACTCCTATCTCGCCTTACTGCTCGCGGTCT
CCCGCGCAGCTTCAGTAGATTCACTTCCACCGCCCCAGCAACCATGACTC
CCAAAGCTTCCACCCGGATCGCATCGGTGCGCCGTCTCAACAAAGAAGGC
CCCGGAGAGCGATCCCTCGCAGAGTGGTGGGCCAACGAACGCGATAACCA
CACCCCGGAAGCGGCCGCCATCGAGGACGCGGCGCAACTCCTCCGAACCA
GCGATATCCCCGTTGCTTTCCCCACAGAGACGGTGTATGGACTGGGTGCA
GATGCGACGCGGAGTGATGCAGTACAAGGGATCTACAAGGCGAAGCAGAG
GCCGTCAGATAACCCGTTGATTATACATGTCGATTCGCTGGGGATGTTGG
AGCGGTTACTCAACCCCACACAGGAAAGCCCATCGCGCAGGACTTCCACT
GCAAAGAACGCTATCCCCCCCATCTACGACTCGGTCATTTCCCGTTTCTG
GCCTGGTCCTCTCACAATCCTCCTCCCTAACCCCTCCGGCTCCCCTCTTG
CTCCCGAAGTCACCTCCAAACTTACGACATTTGGCGTGCGCATGCCCTCG
TCCCCGCTTGCACGCTTGTTGATTCATGTAACGGACCGACCACTGGCGGC
TCCCTCGGCCAACGCATCCACGAAGCCCTCCCCGACGGCGGCGGAACATG
TATTCCATGACCTTGAAGGTCGCATTGAGCTGATCCTTGATGGTGGTCCC
TGTGGCGTAGGCGTGGAGAGTACGGTTGTCGACGGGCTGTCCGACCCCCC
GGCTATTCTTCGACCGGGCGGGATTGGAATCGAGGAGCTGCGGACGTGCG
CTGGGTGGGAGAATGTACAGGTCGGATACCATGACGGCACACTAGACGTG
AAGGAGATCCCACGGGCACCGGGCATGAAGTACCGACACTACTCGCCCAA
GGCACGCGTGGTGCTGTTCGAAGCCGGCTCCGATGAGGAAGCCGTCACGA
GACATATCCGCAAGGACCTGGAAGATTCGGCCATCGGAGCACACATGATC
GGAGTTGTCCGCACGCAACACTGGAAGCGCGGGTTGGGGTTGCTGTCTGC
CAACGAGATGCAAAAGAGCCTGAAGCGCATCCCATCGCTCGTGGACGAGC
TAGTGGGATTCTCCGTCCCTGTAAGCGGCCAAGTCAACGGAAGCACTGCA
ACCAAGGAGACCTTCGACTGCCACCTCGGCACGGATGTCAAGTCGATCGC
GCAGGGCCTCTTCTCTGCGCTACGGGCCATGGATGAAATGGAGGTGGATG
TCATTTACGTCGAGGGCGTGCCTGATCACCAGGGCGATCTGGCAGCTGCT
GTCATGAACCGGCTGCGCAAAGCCGCTGGGGCGGAACTCCGGGTATAATA
ATACTTTACAACCTCTTACCCCTCGGAGGATTTCTATAGATCGCATTCTG
GGCTACATACATACATACATACCTACTTGCTGCATGGAAGGACTTGGCCG
GGTTAGCTAGAAGGAAAATTATGGGACTATTTACGAATTTTAGCATGGAT
ATTGCAGTTAGAATATGACTAGCACAGTTTTTAATATCAGTTTGAGCGTT
AGGAT
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Coding sequence (CDS) from alignment at ch3:2295995..2297849+

>KJC3_003566-T1 ID=KJC3_003566-T1|Name=KJC3_003566-T1|organism=Aspergillus niger KJC3|type=CDS|length=1305bp|location=Sequence derived from alignment at ch3:2295995..2297849+ (Aspergillus niger KJC3)
ATGACTCCCAAAGCTTCCACCCGGATCGCATCGGTGCGCCGTCTCAACAA
AGAAGGCCCCGGAGAGCGATCCCTCGCAGAGTGGTGGGCCAACGAACGCG
ATAACCACACCCCGGAAGCGGCCGCCATCGAGGACGCGGCGCAACTCCTC
CGAACCAGCGATATCCCCGTTGCTTTCCCCACAGAGACGGTGTATGGACT
GGGTGCAGATGCGACGCGGAGTGATGCAGTACAAGGGATCTACAAGGCGA
AGCAGAGGCCGTCAGATAACCCGTTGATTATACATGTCGATTCGCTGGGG
ATGTTGGAGCGGTTACTCAACCCCACACAGGAAAGCCCATCGCGCAGGAC
TTCCACTGCAAAGAACGCTATCCCCCCCATCTACGACTCGGTCATTTCCC
GTTTCTGGCCTGGTCCTCTCACAATCCTCCTCCCTAACCCCTCCGGCTCC
CCTCTTGCTCCCGAAGTCACCTCCAAACTTACGACATTTGGCGTGCGCAT
GCCCTCGTCCCCGCTTGCACGCTTGTTGATTCATGTAACGGACCGACCAC
TGGCGGCTCCCTCGGCCAACGCATCCACGAAGCCCTCCCCGACGGCGGCG
GAACATGTATTCCATGACCTTGAAGGTCGCATTGAGCTGATCCTTGATGG
TGGTCCCTGTGGCGTAGGCGTGGAGAGTACGGTTGTCGACGGGCTGTCCG
ACCCCCCGGCTATTCTTCGACCGGGCGGGATTGGAATCGAGGAGCTGCGG
ACGTGCGCTGGGTGGGAGAATGTACAGGTCGGATACCATGACGGCACACT
AGACGTGAAGGAGATCCCACGGGCACCGGGCATGAAGTACCGACACTACT
CGCCCAAGGCACGCGTGGTGCTGTTCGAAGCCGGCTCCGATGAGGAAGCC
GTCACGAGACATATCCGCAAGGACCTGGAAGATTCGGCCATCGGAGCACA
CATGATCGGAGTTGTCCGCACGCAACACTGGAAGCGCGGGTTGGGGTTGC
TGTCTGCCAACGAGATGCAAAAGAGCCTGAAGCGCATCCCATCGCTCGTG
GACGAGCTAGTGGGATTCTCCGTCCCTGTAAGCGGCCAAGTCAACGGAAG
CACTGCAACCAAGGAGACCTTCGACTGCCACCTCGGCACGGATGTCAAGT
CGATCGCGCAGGGCCTCTTCTCTGCGCTACGGGCCATGGATGAAATGGAG
GTGGATGTCATTTACGTCGAGGGCGTGCCTGATCACCAGGGCGATCTGGC
AGCTGCTGTCATGAACCGGCTGCGCAAAGCCGCTGGGGCGGAACTCCGGG
TATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003725double-stranded RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003566KJC3_003566Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003566-T1.utr5p1KJC3_003566-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003566-T1.exon1KJC3_003566-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003566-T1.cdsKJC3_003566-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003566-T1.utr3p1KJC3_003566-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003566-T1KJC3_003566-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262FW1
DBxrefInterPro:IPR017945
DBxrefInterPro:IPR010923
DBxrefInterPro:IPR038385
DBxrefInterPro:IPR005145
DBxrefInterPro:IPR006070
DBxrefPFAM:PF01300
DBxrefPFAM:PF03481
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2295995..2297849 +
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