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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2299780..2300688+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003568-T1 ID=KJC3_003568-T1|Name=KJC3_003568-T1|organism=Aspergillus niger KJC3|type=mRNA|length=909bp|location=Sequence derived from alignment at ch3:2299780..2300688+ (Aspergillus niger KJC3)
CGGGATCATGCCAATGACTAAGATCAAGTGTGGCCCGCAACGCATTAAAC
ACCAAAACACTGAATCCAGTAGACACGAATAGTATATACTACTCCCTACT
ATTACCTGGAAGATGCCGCCGACAATTTCCCCGCTGGCCTGTTGCATCCC
CCGCACGCCCATCTCACGGTCTTTCCGCAACTTCCATTCCTCCAGATTGT
CCCGAACATTATCACCGTCGTCATCATCAACATCATCACCATTCAGATCT
CCGCTCTCCGTGTCTCTACCAGCATCGTCTACGCGACTTACATCTACAAG
CATCACCAACACAACTCTCCCTACGATCAAAAAGTTCTCCTATCAAATAG
TCCAAAACCGAACCATGTCTGCTGCCCCCGTCCCCGACCGGTACAAACTC
GTCTTCTTCGTCCCGCATTCCCACCTCGAGGCATGTAAAGAAGCTGTCTT
CGCGACCGGCGCGGGAACCTTTCCCGGAGGCAAGTACCGGAAATGCTGCT
TCCAGATGCCTGGTCAGGGCCAATTTCTGCCGTCTGAAGGTGCGAATCCT
GCCATTGGCGAAGTTGGGACGATCGAAACGGTCGAGGAGATGAAGGTGGA
GGTGATGTGTCTGGGACGGTCGGTTATGCTGCAGGCAGTCGAGGAATTGA
TTAAGGCTCATCCGTATGAGGAGGTCGCATATGAGGTATATAAGATGGAG
AATGTATAATGGGCTGTTGGTGATGTCGGATGCGTTGCTGGGCTATAGGC
CCGGTCGGTTTATGTGTCATGACGGCGTTTTGGAGGGATTGAGTCGTGGA
GGTGCCTGTCGTTAGTCCAGATGAATTCTGCAAGCCGGATTAAAGCCGAT
TAAATTATACTGTGATTTTTTGATAGTTTTGAAGAAGCTGTGATGTTGTA
AAAAGGCCG back to topCoding sequence (CDS) from alignment at ch3:2299780..2300688+ >KJC3_003568-T1 ID=KJC3_003568-T1|Name=KJC3_003568-T1|organism=Aspergillus niger KJC3|type=CDS|length=597bp|location=Sequence derived from alignment at ch3:2299780..2300688+ (Aspergillus niger KJC3)
ATGCCGCCGACAATTTCCCCGCTGGCCTGTTGCATCCCCCGCACGCCCAT
CTCACGGTCTTTCCGCAACTTCCATTCCTCCAGATTGTCCCGAACATTAT
CACCGTCGTCATCATCAACATCATCACCATTCAGATCTCCGCTCTCCGTG
TCTCTACCAGCATCGTCTACGCGACTTACATCTACAAGCATCACCAACAC
AACTCTCCCTACGATCAAAAAGTTCTCCTATCAAATAGTCCAAAACCGAA
CCATGTCTGCTGCCCCCGTCCCCGACCGGTACAAACTCGTCTTCTTCGTC
CCGCATTCCCACCTCGAGGCATGTAAAGAAGCTGTCTTCGCGACCGGCGC
GGGAACCTTTCCCGGAGGCAAGTACCGGAAATGCTGCTTCCAGATGCCTG
GTCAGGGCCAATTTCTGCCGTCTGAAGGTGCGAATCCTGCCATTGGCGAA
GTTGGGACGATCGAAACGGTCGAGGAGATGAAGGTGGAGGTGATGTGTCT
GGGACGGTCGGTTATGCTGCAGGCAGTCGAGGAATTGATTAAGGCTCATC
CGTATGAGGAGGTCGCATATGAGGTATATAAGATGGAGAATGTATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003568-T1.utr5p1 | KJC3_003568-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003568-T1.utr3p1 | KJC3_003568-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036069 |
| DBxref | InterPro:IPR015867 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2299780..2300688 + |
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