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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2347291..2349783- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003583-T1 ID=KJC3_003583-T1|Name=KJC3_003583-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2493bp|location=Sequence derived from alignment at ch3:2347291..2349783- (Aspergillus niger KJC3)
CCCCATTTGTCCTTTTCCTCTCCATCTGTGCCTCTCTGCTATCTTCTCGA
CGATTTCTCCACTCCACCCTACTCACGACCAAGAAAAGTGCCTCTGCCTC
TGCCTCTCTTTTAGCGACATTCTTTTTTCTACGACTCCTTCGCAAAGAAC
ATCCCCAGAGAATCCTCCCGCCCATTCCTCGTCTCCCTCGATCCCCTTCA
CGAAAGCCGACCATCGCGCAAACTCCGTTACATTTCCTCGAGTACAGCGC
TTCATACGAAATACCTCCGTTCACGGTTCTTTATAATCGACTCCTTGCAC
CTCGGAACAACTCCGCTGTCGCCTGGCTCTATCCTGCATTCCCGCAATCT
TGGACCGACTTCCATCCGCATATACCATAAACGCTTCCCGCTTCTTCCTT
CCCGCCGCCGTCGTTTGTGTGGCACGATCGCTCAGCTCTTCCTACCACAG
TACTTCCGCCAACAAATTTTTTATATGTCTTTGATCGGATTTGCGGATAC
TCGTTCTTAGCAAACCGGGTGGACGGCCGTTTGGCCGTCACACAGCACGA
GGGAGGAGGATTTGAGGACAAAGCGGGCTATCAGAAGCAGCTGGCTTAGA
ATAGCAGACATTACGGAGAAGTGAAAGGTGTTGCTTGGTAAACGGATTTG
GTCGGACTGGTTTGGTGTGGATACCTCACAGCCTTTCTTTCTGTTCAACG
TTCTCGTGTGTTGCCACCATCCAGCGTCTCGTGTTACTTCCGTCTGGATA
TGGATGCCCAGTATCCCTTTGCCTCCCGCGACGATATCTGGCGCGTCTTC
GAAGAGCTGAAGGAGCTCCACGCCACACAGTTTGAACAGGCGGAGCGTAT
CGCAAGACTGGAACGGCGCAGGGACGAGGATGCAAAGCTGAGGAGTGTTT
GGGGTCCTTTGTCGCCGTTTCCTAGCTCCGTTGGGGGCGCAATCCCCACA
GGTGTGTGTGATAGTTTCTTCTTCTGGATCTTCGCAAGCATGTGGTTTGA
GCATGGCTGATGCGCTGTCTTCTGTAGAGCCGGTCTTCCATACCCCCACG
GACGCTTTCAAGGGTTTCGATCAGGGACACCATCACGGGGCCGTCTCTAC
AATGGGTCTCGACAACGAAGAGGAGCCGCGGCGGGGCACTTCCAGGGCAA
ACAGTGTTAGGTTTGATGAAAGTGCCATCCATGGGTACTACGGGCAGGCC
AATCGATCTAGCAGTGAGCTGCCACTCCGCACCGGCAGCGGTCTCGGAAG
CCATCCCCTGACGGAGCGGTCCTTGTCTCATCGGTCAGATGGGAGGCAAA
GCTCTTCCGGGCACTCCCACCATTCTGCTCGTACCAACAGCCTGGGCCTT
GAAACAACTAGCAGGATGATGAGCTCTGTCGGTGGTTCTCCTCTTATTCC
TCCGCCTGGACTGTTCCTCCTTGGCCCTGTGCCATGCATCATTCGGTGCT
GGCTGACAACTACCTTCTCCAATGATTCTCTCCTGTACGCTGCTGTCTGC
TCGGGCTCATACACCTCGTCACTGGGATACCCGATGGTTCAGATGCTTGG
GTTGGCAGATCAAATCGTGTATGAGGGAGATGTGCAGTACATCAAGCTCC
CAATCTACCTTCCCGAAGCTAGTGTGCACCAAGCCTCTTCGCGGTCCAGC
AGCCCCGAACCTCAAGTACCTACGTTGACCGTTCGGTTTCTAGTCCGCGA
GGTTGAGTCTGGCGACACTGCAATCCAGATTGTCCTGGGAAGTGACGTCC
TTCGGTCCCACAACGCCGACGTGCTCTTCTCACAAGACAAGATTATCATG
GTTGATGATGAAAGGAACAAGGTATCCATACCCTTGGTGCGCCCCGAAGA
TGATTCGGTTTTCAAGTCATTGTCCACGATGTCGGATGCCACCCGCAGCG
GGCGAAAGGCTCGTTCGGTCCACGAGGATATCCAGGCGGACACGAACGGC
CATGCAACCTTTGGTGTGATTGGGCGTCCTGCCAGCCTCTCTCGCCGGGC
TACCTCCACGTCTGCCTCTGCAAGAGAGTCTCTCGAGGGGTCCGAGGAGA
GTCGGAAGGCTCGCCCGGAGACCCAAGAGGGGCCAACGGACACTGATACC
CAAAAGGAACAGAAGTCCGGCGCAGAAGTCGATGCCCAGGTGGGTGGCCC
AGCACGGGTGGAGGCAGCCGGAGTCTGGGGCTCGTGGAAACGCGAGTCCA
AGTCAGATCCGAACGCTTCTGCAACAGGCAAGGCCACCCGTGGCCGTACG
ATGAAAGTACTGCGGCCTACGAAATCCTCCACACGAGTGGCTCAAGCTAC
GACTGTTCCTAGTAGTTCTGGTACCGACTATGCCGCGACCTCAGGGCCGT
CGCAGCCCGCGTCGACCCGAGCATCGCCGGATGGGACACGCACGAGCAAG
CAGTGGCCTAGCAATCCAGTTGGCGGGGCGTCCGCATTTGGCTGGCTCAA
CACCACACAGCCACCAGGTCGGACTGCAATGACCCCTAAATGA back to topCoding sequence (CDS) from alignment at ch3:2347291..2349783- >KJC3_003583-T1 ID=KJC3_003583-T1|Name=KJC3_003583-T1|organism=Aspergillus niger KJC3|type=CDS|length=3336bp|location=Sequence derived from alignment at ch3:2347291..2349783- (Aspergillus niger KJC3)
AGCCGGTCTTCCATACCCCCACGGACGCTTTCAAGGGTTTCGATCAGGGA
CACCATCACGGGGCCGTCTCTACAATGGGTCTCGACAACGAAGAGGAGCC
GCGGCGGGGCACTTCCAGGGCAAACAGTGTTAGGTTTGATGAAAGTGCCA
TCCATGGGTACTACGGGCAGGCCAATCGATCTAGCAGTGAGCTGCCACTC
CGCACCGGCAGCGGTCTCGGAAGCCATCCCCTGACGGAGCGGTCCTTGTC
TCATCGGTCAGATGGGAGGCAAAGCTCTTCCGGGCACTCCCACCATTCTG
CTCGTACCAACAGCCTGGGCCTTGAAACAACTAGCAGGATGATGAGCTCT
GTCGGTGGTTCTCCTCTTATTCCTCCGCCTGGACTGTTCCTCCTTGGCCC
TGTGCCATGCATCATTCGGTGCTGGCTGACAACTACCTTCTCCAATGATT
CTCTCCTGTACGCTGCTGTCTGCTCGGGCTCATACACCTCGTCACTGGGA
TACCCGATGGTTCAGATGCTTGGGTTGGCAGATCAAATCGTGTATGAGGG
AGATGTGCAGTACATCAAGCTCCCAATCTACCTTCCCGAAGCTAGTGTGC
ACCAAGCCTCTTCGCGGTCCAGCAGCCCCGAACCTCAAGTACCTACGTTG
ACCGTTCGGTTTCTAGTCCGCGAGGTTGAGTCTGGCGACACTGCAATCCA
GATTGTCCTGGGAAGTGACGTCCTTCGGTCCCACAACGCCGACGTGCTCT
TCTCACAAGACAAGATTATCATGGTTGATGATGAAAGGAACAAGGTATCC
ATACCCTTGGTGCGCCCCGAAGATGATTCGGTTTTCAAGTCATTGTCCAC
GATGTCGGATGCCACCCGCAGCGGGCGAAAGGCTCGTTCGGTCCACGAGG
ATATCCAGGCGGACACGAACGGCCATGCAACCTTTGGTGTGATTGGGCGT
CCTGCCAGCCTCTCTCGCCGGGCTACCTCCACGTCTGCCTCTGCAAGAGA
GTCTCTCGAGGGGTCCGAGGAGAGTCGGAAGGCTCGCCCGGAGACCCAAG
AGGGGCCAACGGACACTGATACCCAAAAGGAACAGAAGTCCGGCGCAGAA
GTCGATGCCCAGGTGGGTGGCCCAGCACGGGTGGAGGCAGCCGGAGTCTG
GGGCTCGTGGAAACGCGAGTCCAAGTCAGATCCGAACGCTTCTGCAACAG
GCAAGGCCACCCGTGGCCGTACGATGAAAGTACTGCGGCCTACGAAATCC
TCCACACGAGTGGCTCAAGCTACGACTGTTCCTAGTAGTTCTGGTACCGA
CTATGCCGCGACCTCAGGGCCGTCGCAGCCCGCGTCGACCCGAGCATCGC
CGGATGGGACACGCACGAGCAAGCAGTGGCCTAGCAATCCAGTTGGCGGG
GCGTCCGCATTTGGCTGGCTCAACACCACACAGCCACCAGGTCGGACTGC
AATGACCCCTAAATGAATGGATGCCCAGTATCCCTTTGCCTCCCGCGACG
ATATCTGGCGCGTCTTCGAAGAGCTGAAGGAGCTCCACGCCACACAGTTT
GAACAGGCGGAGCGTATCGCAAGACTGGAACGGCGCAGGGACGAGGATGC
AAAGCTGAGGAGTGTTTGGGGTCCTTTGTCGCCGTTTCCTAGCTCCGTTG
GGGGCGCAATCCCCACAGAGCCGGTCTTCCATACCCCCACGGACGCTTTC
AAGGGTTTCGATCAGGGACACCATCACGGGGCCGTCTCTACAATGGGTCT
CGACAACGAAGAGGAGCCGCGGCGGGGCACTTCCAGGGCAAACAGTGTTA
GGTTTGATGAAAGTGCCATCCATGGGTACTACGGGCAGGCCAATCGATCT
AGCAGTGAGCTGCCACTCCGCACCGGCAGCGGTCTCGGAAGCCATCCCCT
GACGGAGCGGTCCTTGTCTCATCGGTCAGATGGGAGGCAAAGCTCTTCCG
GGCACTCCCACCATTCTGCTCGTACCAACAGCCTGGGCCTTGAAACAACT
AGCAGGATGATGAGCTCTGTCGGTGGTTCTCCTCTTATTCCTCCGCCTGG
ACTGTTCCTCCTTGGCCCTGTGCCATGCATCATTCGGTGCTGGCTGACAA
CTACCTTCTCCAATGATTCTCTCCTGTACGCTGCTGTCTGCTCGGGCTCA
TACACCTCGTCACTGGGATACCCGATGGTTCAGATGCTTGGGTTGGCAGA
TCAAATCGTGTATGAGGGAGATGTGCAGTACATCAAGCTCCCAATCTACC
TTCCCGAAGCTAGTGTGCACCAAGCCTCTTCGCGGTCCAGCAGCCCCGAA
CCTCAAGTACCTACGTTGACCGTTCGGTTTCTAGTCCGCGAGGTTGAGTC
TGGCGACACTGCAATCCAGATTGTCCTGGGAAGTGACGTCCTTCGGTCCC
ACAACGCCGACGTGCTCTTCTCACAAGACAAGATTATCATGGTTGATGAT
GAAAGGAACAAGGTATCCATACCCTTGGTGCGCCCCGAAGATGATTCGGT
TTTCAAGTCATTGTCCACGATGTCGGATGCCACCCGCAGCGGGCGAAAGG
CTCGTTCGGTCCACGAGGATATCCAGGCGGACACGAACGGCCATGCAACC
TTTGGTGTGATTGGGCGTCCTGCCAGCCTCTCTCGCCGGGCTACCTCCAC
GTCTGCCTCTGCAAGAGAGTCTCTCGAGGGGTCCGAGGAGAGTCGGAAGG
CTCGCCCGGAGACCCAAGAGGGGCCAACGGACACTGATACCCAAAAGGAA
CAGAAGTCCGGCGCAGAAGTCGATGCCCAGGTGGGTGGCCCAGCACGGGT
GGAGGCAGCCGGAGTCTGGGGCTCGTGGAAACGCGAGTCCAAGTCAGATC
CGAACGCTTCTGCAACAGGCAAGGCCACCCGTGGCCGTACGATGAAAGTA
CTGCGGCCTACGAAATCCTCCACACGAGTGGCTCAAGCTACGACTGTTCC
TAGTAGTTCTGGTACCGACTATGCCGCGACCTCAGGGCCGTCGCAGCCCG
CGTCGACCCGAGCATCGCCGGATGGGACACGCACGAGCAAGCAGTGGCCT
AGCAATCCAGTTGGCGGGGCGTCCGCATTTGGCTGGCTCAACACCACACA
GCCACCAGGTCGGACTGCAATGACCCCTAAATGAATGGATGCCCAGTATC
CCTTTGCCTCCCGCGACGATATCTGGCGCGTCTTCGAAGAGCTGAAGGAG
CTCCACGCCACACAGTTTGAACAGGCGGAGCGTATCGCAAGACTGGAACG
GCGCAGGGACGAGGATGCAAAGCTGAGGAGTGTTTGGGGTCCTTTGTCGC
CGTTTCCTAGCTCCGTTGGGGGCGCAATCCCCACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003583-T1.utr5p1 | KJC3_003583-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2347291..2349783 - |
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