You are here

Home

KJC3_003587-T1, KJC3_003587-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003587-T1
Unique NameKJC3_003587-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2358650..2359486-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003587-T1 ID=KJC3_003587-T1|Name=KJC3_003587-T1|organism=Aspergillus niger KJC3|type=mRNA|length=837bp|location=Sequence derived from alignment at ch3:2358650..2359486- (Aspergillus niger KJC3)
ATGAAGCAAATCAATACCATCGCTCACCTCACAACCCTCCTTTCCCTTAC
TGCGAAGATAGCTGCCCACGGCCATGTGAGCAATATTGTCATCAATGGTG
TCTCCTACCGTGGCTGGGACATCAACTCGGATCCCTACAATTCAGATCCT
CCTGTGGTAGTCGCATGGCAGACACCGAACACTGCCAACGGATTCATTAC
GCCTGACGAATATGACACGGACGACATTATCTGTCACCTGGATGCCACTA
ATGCCGAGGGGCATGCCGTTATTGCTGCAGGAGACAAGATCAGCATTCAA
TGGACCACTTGGCCTGACACTCACCATGGACCGGTCATAAGTTATCTTGC
AAACTGTGGCTCGAGCTGCGAGACTGTTGACAAGACGACTCTTGAGTTCT
TCAAGATTGATGGTGTTGGCCTTGTTGATGACTCGACTGTGCCTGGCACT
TGGGGAGATGACCAGTTGATTGCAGACAACAATACATGGCTGGTCGAGAT
CCCACCAGACATTGCCCCCGGATATTATGTTCTTCGCCACGAACTGATTG
CCTTGCATGGGGCCAGCAGTGAGAATGGGGCACAGAATTATCCCCAGTGT
TTCAATCTCCAAGTCACCGGGTCAGGTACTGCCGAGCCTTCCGGCGTACT
CGGTACGGAGTTGTATAGCCCGACAGACCCCGGAATCCTTGTCAATATCT
ACCAGTCACTGTCCACTTACGAGGTGCCTGGCCCAACATTGATCCCGGAG
GCAGTATCTGTTGTGCAATCGAGCTCGACCATCACAGCATCCGGAACACC
CGTGACTGGGACCGCTGCGTCCACCGCGACATCATGA
back to top

Coding sequence (CDS) from alignment at ch3:2358650..2359486-

>KJC3_003587-T1 ID=KJC3_003587-T1|Name=KJC3_003587-T1|organism=Aspergillus niger KJC3|type=CDS|length=837bp|location=Sequence derived from alignment at ch3:2358650..2359486- (Aspergillus niger KJC3)
ATGAAGCAAATCAATACCATCGCTCACCTCACAACCCTCCTTTCCCTTAC
TGCGAAGATAGCTGCCCACGGCCATGTGAGCAATATTGTCATCAATGGTG
TCTCCTACCGTGGCTGGGACATCAACTCGGATCCCTACAATTCAGATCCT
CCTGTGGTAGTCGCATGGCAGACACCGAACACTGCCAACGGATTCATTAC
GCCTGACGAATATGACACGGACGACATTATCTGTCACCTGGATGCCACTA
ATGCCGAGGGGCATGCCGTTATTGCTGCAGGAGACAAGATCAGCATTCAA
TGGACCACTTGGCCTGACACTCACCATGGACCGGTCATAAGTTATCTTGC
AAACTGTGGCTCGAGCTGCGAGACTGTTGACAAGACGACTCTTGAGTTCT
TCAAGATTGATGGTGTTGGCCTTGTTGATGACTCGACTGTGCCTGGCACT
TGGGGAGATGACCAGTTGATTGCAGACAACAATACATGGCTGGTCGAGAT
CCCACCAGACATTGCCCCCGGATATTATGTTCTTCGCCACGAACTGATTG
CCTTGCATGGGGCCAGCAGTGAGAATGGGGCACAGAATTATCCCCAGTGT
TTCAATCTCCAAGTCACCGGGTCAGGTACTGCCGAGCCTTCCGGCGTACT
CGGTACGGAGTTGTATAGCCCGACAGACCCCGGAATCCTTGTCAATATCT
ACCAGTCACTGTCCACTTACGAGGTGCCTGGCCCAACATTGATCCCGGAG
GCAGTATCTGTTGTGCAATCGAGCTCGACCATCACAGCATCCGGAACACC
CGTGACTGGGACCGCTGCGTCCACCGCGACATCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003587KJC3_003587Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003587-T1.cdsKJC3_003587-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003587-T1.exon1KJC3_003587-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003587-T1KJC3_003587-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:AA9
DBxrefInterPro:IPR005103
DBxrefPFAM:PF03443
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2358650..2359486 -
Powered by Drupal