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KJC3_003591-T1, KJC3_003591-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003591-T1
Unique NameKJC3_003591-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2369639..2371053-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003591-T1 ID=KJC3_003591-T1|Name=KJC3_003591-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1415bp|location=Sequence derived from alignment at ch3:2369639..2371053- (Aspergillus niger KJC3)
CAACCAAACAACACAGAGTCTAACAACCGCCACCATGACTACGGGTATGT
ATCTATATTGATTGAATCTGAGAACCTCTGTACTGACTACTTTATAGCTC
ACAGGCCCACGTTCGATCCCGTATGTACCCCCGATCATCTGCTCAGCGCA
TGAAGCTCATTGAAACAGGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGC
GTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGGTAAG
TGGTATGACAATATGTCTGCGACAATTTCTGACATGTCCAAGTCAATTCG
GTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTG
CTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGA
CGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTT
CACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGA
CGACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGAATC
GGAGGAGGATAGCAGTGAAGATGAAAGGTCAGACTCGCGAATATATTAGA
TTCGCGCGATAATACTGACAGGTTACAGTGACGATGAAGAGGACGAAGCT
GCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAGCA
GAAGGAGAAAGAGGTTTGTACATTGGTTTTTGACTTTGACATGGTTTACT
GATATTTGTCAGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGA
GGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAATG
TGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTGGT
ACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGTAAGTGCTTGCTTTTT
TATCATCTATTATGCTATGATACTAATCTTGCATGCAGGATCTGTTGCGA
TCGGACTTCCACAAGAGATTCATGGTGAGTTGGTACTGTTGCAAGAGTCA
ATGAATTTACTAATTTGAGCAGTCAAAATACGTCCGCTAAAATCGTGTCC
GACAAACGTACCCACTCCTTACAGCAGTCACTGTGATGACTGTTTGTCCT
ACCCTAGAGTCGTCAATCGGTCCCCAACTCATACCAGATACAGCATCGTG
GTGGATTTGACTTCCAGATCAGCATGCGAATAGAGAAGCAGTACAAGCCA
GTATATGCTTCCTACTACAGCACAGGGAAGAACGCTCGACAACACAAACG
AGAGTGAATGGGTGATTTAACACATGGCGCTTTATATTTCTCTTCATAGT
GTATACCCACATCATCAATCAAACCAATATATCCATATAGCCCAATTTAG
TTTAGTACTCCGAAC
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Coding sequence (CDS) from alignment at ch3:2369639..2371053-

>KJC3_003591-T1 ID=KJC3_003591-T1|Name=KJC3_003591-T1|organism=Aspergillus niger KJC3|type=CDS|length=5640bp|location=Sequence derived from alignment at ch3:2369639..2371053- (Aspergillus niger KJC3)
TCAAAATACGTCCGCTAAGATCTGTTGCGATCGGACTTCCACAAGAGATT
CATGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGATA
TCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAATGTGAAGCGG
AGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAGA
CAAGAGGGGCAAAGAGTTTGTTAACTGACGATGAAGAGGACGAAGCTGCT
GAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAA
GGAGAAAGAGTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGC
GATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAA
GAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGC
GCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAA
GATCCAGAAGCCAAACGACGACGAATACTAGAGGAGACTCGAGATATAGA
TGCAGATTCCGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGGCACA
AGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGTCTTCTCCCGG
CTTATACGCACCTGAAGACACGCTCACAGGCCCACGTTCGATCCCATGAC
TACGGTCAAAATACGTCCGCTAAGATCTGTTGCGATCGGACTTCCACAAG
AGATTCATGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGGT
CGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAATGTGA
AGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTGGTACA
GAAGACAAGAGGGGCAAAGAGTTTGTTAACTGACGATGAAGAGGACGAAG
CTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAG
CAGAAGGAGAAAGAGTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGC
AACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCC
AAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACC
CAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGG
AAGAAGATCCAGAAGCCAAACGACGACGAATACTAGAGGAGACTCGAGAT
ATAGATGCAGATTCCGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAG
GCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGTCTTCT
CCCGGCTTATACGCACCTGAAGACACGCTCACAGGCCCACGTTCGATCCC
ATGACTACGGTCAAAATACGTCCGCTAAGATCTGTTGCGATCGGACTTCC
ACAAGAGATTCATGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGC
GAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAA
TGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTG
GTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACTGACGATGAAGAGGA
CGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGC
TCGAGCAGAAGGAGAAAGAGTCAATTCGGTCAGGGTAGTGAAGTCGAAAC
CCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATT
TCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCC
ACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGAC
AGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATACTAGAGGAGACTC
GAGATATAGATGCAGATTCCGATGAATCGGAGGAGGATAGCAGTGAAGAT
GAAAGGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGT
CTTCTCCCGGCTTATACGCACCTGAAGACACGCTCACAGGCCCACGTTCG
ATCCCATGACTACGGTCAAAATACGTCCGCTAAGATCTGTTGCGATCGGA
CTTCCACAAGAGATTCATGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGC
AGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGAC
TTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGC
CCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACTGACGATGAA
GAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGA
GAGGCTCGAGCAGAAGGAGAAAGAGTCAATTCGGTCAGGGTAGTGAAGTC
GAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGC
TCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGA
CCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCA
GGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATACTAGAGGA
GACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAGGATAGCAGTG
AAGATGAAAGGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACC
AGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGCTCACAGGCCCAC
GTTCGATCCCATGACTACGGTCAAAATACGTCCGCTAAGATCTGTTGCGA
TCGGACTTCCACAAGAGATTCATGGAACGCGAGCGTGCTGCGCAAGAAGA
GGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTC
AAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAAC
CAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACTGACG
ATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAG
AAAGAGAGGCTCGAGCAGAAGGAGAAAGAGTCAATTCGGTCAGGGTAGTG
AAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAG
GCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGT
CGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTG
ATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATACTA
GAGGAGACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAGGATAG
CAGTGAAGATGAAAGGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTA
CCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGCTCACAGG
CCCACGTTCGATCCCATGACTACGGTCAAAATACGTCCGCTAAGATCTGT
TGCGATCGGACTTCCACAAGAGATTCATGGAACGCGAGCGTGCTGCGCAA
GAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAA
TCCTCAAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCA
AGAACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAAC
TGACGATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAA
TTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAGTCAATTCGGTCAGGG
TAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGG
CGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCT
AAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGG
CGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAA
TACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAG
GATAGCAGTGAAGATGAAAGGCACAAGGAAAGGAGGCCCTCCGCGGCCCT
GCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGCTC
ACAGGCCCACGTTCGATCCCATGACTACGGTCAAAATACGTCCGCTAAGA
TCTGTTGCGATCGGACTTCCACAAGAGATTCATGGAACGCGAGCGTGCTG
CGCAAGAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTG
CTTAATCCTCAAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGT
GTTCAAGAACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTG
TTAACTGACGATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGA
GAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAGTCAATTCGGT
CAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCT
CCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACG
AGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCA
CCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGACG
ACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGAATCGG
AGGAGGATAGCAGTGAAGATGAAAGGCACAAGGAAAGGAGGCCCTCCGCG
GCCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACA
CGCTCACAGGCCCACGTTCGATCCCATGACTACGGTCAAAATACGTCCGC
TAAGATCTGTTGCGATCGGACTTCCACAAGAGATTCATGGAACGCGAGCG
TGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACC
CGCTGCTTAATCCTCAAGACTTCAATGTGAAGCGGAGATGGGACGATGAT
GTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGA
GTTTGTTAACTGACGATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAG
CTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAGTCAAT
TCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAG
CTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGT
GGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTG
GTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAA
CGACGACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGA
ATCGGAGGAGGATAGCAGTGAAGATGAAAGGCACAAGGAAAGGAGGCCCT
CCGCGGCCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGA
AGACACGCTCACAGGCCCACGTTCGATCCCATGACTACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC15KJC3_003591Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003591-T1KJC3_003591-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003591-T1.cdsKJC3_003591-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003591-T1.utr3p1KJC3_003591-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003591-T1.exon8KJC3_003591-T1.exon8Aspergillus niger KJC3exon
KJC3_003591-T1.exon7KJC3_003591-T1.exon7Aspergillus niger KJC3exon
KJC3_003591-T1.exon6KJC3_003591-T1.exon6Aspergillus niger KJC3exon
KJC3_003591-T1.exon5KJC3_003591-T1.exon5Aspergillus niger KJC3exon
KJC3_003591-T1.exon4KJC3_003591-T1.exon4Aspergillus niger KJC3exon
KJC3_003591-T1.exon3KJC3_003591-T1.exon3Aspergillus niger KJC3exon
KJC3_003591-T1.exon2KJC3_003591-T1.exon2Aspergillus niger KJC3exon
KJC3_003591-T1.exon1KJC3_003591-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003591-T1.utr5p1KJC3_003591-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006973
DBxrefPFAM:PF04889
Productcomplexed with cef1p
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2369639..2371053 -
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