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KJC3_003592-T1, KJC3_003592-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003592-T1
Unique NameKJC3_003592-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2371231..2372361+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003592-T1 ID=KJC3_003592-T1|Name=KJC3_003592-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1131bp|location=Sequence derived from alignment at ch3:2371231..2372361+ (Aspergillus niger KJC3)
CCGTGACCCCCGCCGGGGCCAAATCCGCCTCCGCAATCATGAACAAAGAA
GCATTGCTCTCCGTCACTGAGCGCGACTTCATCCTCAATGCGCTGCGCGA
GGATGTACGACTGGACGGTCGCGGTTTCGACCAGCTACGTCCGCTGAATG
TGTCATTCGGGGAGGAGTATGGACATGTGAAGGTGCAGCTCGGCAAAACC
AGGTAGGTAGACTCATCGTTCAGCTTGCTTCAACAACACTAACTGATTCT
TTTCTGCTGCAGCCTCATTGTCCGTATCTCAGCTGAAGTCACAAAACCTC
ACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCCATGGAGCTGACT
GCCATGGGCTCCCCCGCTTGGGACAATGGCCGGTATGGATATTCTCATCA
AGCCGCGAGCGAGCAATAACTCAGCTGACCATTTCTGCTTCAGACAAGGA
GACTTTGAAACATATGTCACCAATGTCCTCGACCGTGTCGTTCGCCATTC
CAACGCCCTGGACACCGAGTCCCTCTGTATCCTCAAGGGTGTCAGCTGCT
GGAGCATCCGCGCGGACGTCCACGTTACCGATTACGATGGCAATCTGATT
GATGCGGCTTGTATTGGTATCATGGCTGGATTGCAGCATTTCCGCCGTCA
AGACGCTGTAGTCAAGGATGGCCAGGTGATTGTGTACGGACTCGATGAAC
GAGTTCCTGTCGCATTGAACATTACACATAAGCCGCTGTCTGTTACTTTC
CACACATTCGATGAAGGAAAACGGGTCATCATTGATGCAACTCGGAAGGA
GGAGCAAGCAGCGGAAGCTGACGTCGTTATTGGCATCAACAACGCTGGTG
ATGTGTGCTTCGTCTCCAAGTTCTCCGGATCGCCAGTGGACGCGATGGTC
TTTGTGGATAAGACTTCCGTTGCCCTGGAGAAGGTCAAGGAGATCAATGC
AATCATTGATAAGGCGTTACAAGCCGATCTCTCGAAACGAGCGAAGATTG
GCATGGCTGAGGAGTCGCGGGCGGAAAACGATCGGTGATTGGGCTTGAGC
TTAAAGAAAGCGAATACCATTAATGAGTTAAGACACCGCATTAGAATTGA
TGTATGATCAAATCAAAGCCATTAGTTCGGC
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Coding sequence (CDS) from alignment at ch3:2371231..2372361+

>KJC3_003592-T1 ID=KJC3_003592-T1|Name=KJC3_003592-T1|organism=Aspergillus niger KJC3|type=CDS|length=2637bp|location=Sequence derived from alignment at ch3:2371231..2372361+ (Aspergillus niger KJC3)
ATGAACAAAGAAGCATTGCTCTCCGTCACTGAGCGCGACTTCATCCTCAA
TGCGCTGCGCGAGGATGTACGACTGGACGGTCGCGGTTTCGACCAGCTAC
GTCCGCTGAATGTGTCATTCGGGGAGGAGTATGGACATGTGAAGGTGCAG
CTCGGCAAAACCAGCCTCATTGTCCGTATCTCAGCTGAAGTCACAAAACC
TCACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCCATGGAGCTGA
CTGCCATGGGCTCCCCCGCTTGGGACAATGGCCGACAAGGAGACTTTGAA
ACATATGTCACCAATGTCCTCGACCGTGTCGTTCGCCATTCCAACGCCCT
GGACACCGAGTCCCTCTGTATCCTCAAGGGTGTCAGCTGCTGGAGCATCC
GCGCGGACGTCCACGTTACCGATTACGATGGCAATCTGATTGATGCGGCT
TGTATTGGTATCATGGCTGGATTGCAGCATTTCCGCCGTCAAGACGCTGT
AGTCAAGGATGGCCAGGTGATTGTGTACGGACTCGATGAACGAGTTCCTG
TCGCATTGAACATTACACATAAGCCGCTGTCTGTTACTTTCCACACATTC
GATGAAGGAAAACGGGTCATCATTGATGCAACTCGGAAGGAGGAGCAAGC
AGCGGAAGCTGACGTCGTTATTGGCATCAACAACGCTGGTGATGTGTGCT
TCGTCTCCAAGTTCTCCGGATCGCCAGTGGACGCGATGGTCTTTGTGGAT
AAGACTTCCGTTGCCCTGGAGAAGGTCAAGGAGATCAATGCAATCATTGA
TAAGGCGTTACAAGCCGATCTCTCGAAACGAGCGAAGATTGGCATGGCTG
AGGAGTCGCGGGCGGAAAACGATCGGTGAATGAACAAAGAAGCATTGCTC
TCCGTCACTGAGCGCGACTTCATCCTCAATGCGCTGCGCGAGGATGTACG
ACTGGACGGTCGCGGTTTCGACCAGCTACGTCCGCTGAATGTGTCATTCG
GGGAGGAGTATGGACATGTGAAGGTGCAGCTCGGCAAAACCAGCCTCATT
GTCCGTATCTCAGCTGAAGTCACAAAACCTCACGATGATCGTCCGTTCGA
CGGTCTTTTCACAATCGCCATGGAGCTGACTGCCATGGGCTCCCCCGCTT
GGGACAATGGCCGACAAGGAGACTTTGAAACATATGTCACCAATGTCCTC
GACCGTGTCGTTCGCCATTCCAACGCCCTGGACACCGAGTCCCTCTGTAT
CCTCAAGGGTGTCAGCTGCTGGAGCATCCGCGCGGACGTCCACGTTACCG
ATTACGATGGCAATCTGATTGATGCGGCTTGTATTGGTATCATGGCTGGA
TTGCAGCATTTCCGCCGTCAAGACGCTGTAGTCAAGGATGGCCAGGTGAT
TGTGTACGGACTCGATGAACGAGTTCCTGTCGCATTGAACATTACACATA
AGCCGCTGTCTGTTACTTTCCACACATTCGATGAAGGAAAACGGGTCATC
ATTGATGCAACTCGGAAGGAGGAGCAAGCAGCGGAAGCTGACGTCGTTAT
TGGCATCAACAACGCTGGTGATGTGTGCTTCGTCTCCAAGTTCTCCGGAT
CGCCAGTGGACGCGATGGTCTTTGTGGATAAGACTTCCGTTGCCCTGGAG
AAGGTCAAGGAGATCAATGCAATCATTGATAAGGCGTTACAAGCCGATCT
CTCGAAACGAGCGAAGATTGGCATGGCTGAGGAGTCGCGGGCGGAAAACG
ATCGGTGAATGAACAAAGAAGCATTGCTCTCCGTCACTGAGCGCGACTTC
ATCCTCAATGCGCTGCGCGAGGATGTACGACTGGACGGTCGCGGTTTCGA
CCAGCTACGTCCGCTGAATGTGTCATTCGGGGAGGAGTATGGACATGTGA
AGGTGCAGCTCGGCAAAACCAGCCTCATTGTCCGTATCTCAGCTGAAGTC
ACAAAACCTCACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCCAT
GGAGCTGACTGCCATGGGCTCCCCCGCTTGGGACAATGGCCGACAAGGAG
ACTTTGAAACATATGTCACCAATGTCCTCGACCGTGTCGTTCGCCATTCC
AACGCCCTGGACACCGAGTCCCTCTGTATCCTCAAGGGTGTCAGCTGCTG
GAGCATCCGCGCGGACGTCCACGTTACCGATTACGATGGCAATCTGATTG
ATGCGGCTTGTATTGGTATCATGGCTGGATTGCAGCATTTCCGCCGTCAA
GACGCTGTAGTCAAGGATGGCCAGGTGATTGTGTACGGACTCGATGAACG
AGTTCCTGTCGCATTGAACATTACACATAAGCCGCTGTCTGTTACTTTCC
ACACATTCGATGAAGGAAAACGGGTCATCATTGATGCAACTCGGAAGGAG
GAGCAAGCAGCGGAAGCTGACGTCGTTATTGGCATCAACAACGCTGGTGA
TGTGTGCTTCGTCTCCAAGTTCTCCGGATCGCCAGTGGACGCGATGGTCT
TTGTGGATAAGACTTCCGTTGCCCTGGAGAAGGTCAAGGAGATCAATGCA
ATCATTGATAAGGCGTTACAAGCCGATCTCTCGAAACGAGCGAAGATTGG
CATGGCTGAGGAGTCGCGGGCGGAAAACGATCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000178exosome (RNase complex)
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003592KJC3_003592Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003592-T1KJC3_003592-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003592-T1.utr5p1KJC3_003592-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003592-T1.exon1KJC3_003592-T1.exon1Aspergillus niger KJC3exon
KJC3_003592-T1.exon2KJC3_003592-T1.exon2Aspergillus niger KJC3exon
KJC3_003592-T1.exon3KJC3_003592-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003592-T1.cdsKJC3_003592-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003592-T1.utr3p1KJC3_003592-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264398
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR036345
DBxrefInterPro:IPR033100
DBxrefInterPro:IPR027408
DBxrefInterPro:IPR015847
DBxrefInterPro:IPR001247
DBxrefPFAM:PF03725
DBxrefPFAM:PF01138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2371231..2372361 +
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