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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2385232..2386979+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003599-T1 ID=KJC3_003599-T1|Name=KJC3_003599-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1748bp|location=Sequence derived from alignment at ch3:2385232..2386979+ (Aspergillus niger KJC3)
ATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCCTACGGCTAGC
CAGTGGTGGGAAGCTGGCCGGATACCCTGAGGAGCAACCTGGTTTCCAAG
TACCAGCTGGATCCCTCAAGCCCTCTGCCTCCCCCTCATCCACTCTTCTC
TCAGATAGGGAGGTCATTGGGGATCCGGAAAAAGCAAACAAAGAATCCAA
CGTATTAGTCATCGGCTGGTATGGTGACAACGATCCAGAGAAACCACACA
ACTGGTCCTTCGGAAAGAAGCTCTGGGTTTCCATGTTGCTCTTTGTCTAC
ACCTTCTCCGTTTATATTGGCTCCTCGCTATATACTGCCAGTGAGCCGGA
CATCATGCGGATCTATGGTGTTGGTGACGAAGTGGCCGAGCTGGGATTAA
CCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTTCTCGCCTCTG
TCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTGTCACTTATTT
CCTCTTCGTCATTCTCTGCATTCCTATGGCTCTGGTTAATAATATTGCGG
GTATTCATATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTCGCCCTGCCTG
GCTACGGCCGGCGCAAGCTATGGCGATTTCTACGGCGCAAAACAAATGCC
CTATGTCATTGCTTTATGGGGAGGAGGTGCGACTTTGGGCCCGGTAGGTT
CAGTTCCTATAAATCCTCGCACTTATCATACTAAATAGTACGTTTTAAAG
GCCCTCGGACCCCTCGTCGCCGGATTCGCCGTCGAAAAAATGGGCTGGCG
CTGGAGCTCCTGGGAACTTCTCTGGCTATCCGCCCCTACAATGGTGATCA
TGTTCCTCAGTATGCCCGAGACATCATCAGACAACATCCTGCTCCGTCGC
GCTCGACGCCTACGCACTCAAACAGGTCGCATAGACATCAAGTCCGAGTC
CGAGATTCGTCAGTCAAAGATGAGTCCAAGAGCAATTACTTTCAACGCTC
TCATCAAACCATGGGAGATAAACGCTCTTGACCCTGCTGTTCTTTTCTCA
ACCTTTTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTC
CTTCCCCCTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCAGG
GTCTCGCATTCCTTGCTGTGCTGTGCGGTCTCTGTGTTGCGGTCGGTCTT
CTATGCGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGA
TCCTGTGCCTCCTGAAGCTCGTATTTGGCCGGGATTGTTCGCGACATGGC
TTATTCCAACGGGATTATATATCTTTGGTACGTTCTTCTTCCTGTCCTTT
AACTTCTCCTCGATTCTCTTTTGTCTGTGAAGGTTGTAATTTATACTAAT
CAATATCCTCCAGCATGGACCTCCTCCCCCTCCATCCATTGGATCGTCAG
CCTGGTCGGCATCGCCATCAGCATGTGCGGCGTCTTTATCATCACCCAGT
GCATGTTCATCTACCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTG
TTCGCCGCCAACGGCTTCGCGCGCAGTCTACTTGCTGGTGCTTCTATTCT
CTTCTCTCGCCCAATGTTCCAGGGGATTAAGGTCTCTGGTGGAGTGAGTC
TGCTTGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTAC
TTTTTCGGGGCGCGGTTGCGGGAGAGGAGTCGGTTTACGGGGCTGTGA back to topCoding sequence (CDS) from alignment at ch3:2385232..2386979+ >KJC3_003599-T1 ID=KJC3_003599-T1|Name=KJC3_003599-T1|organism=Aspergillus niger KJC3|type=CDS|length=4815bp|location=Sequence derived from alignment at ch3:2385232..2386979+ (Aspergillus niger KJC3)
ATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCCTACGGCTAGC
CAGTGGTGGGAAGCTGGCCGGATACCCTGAGGAGCAACCTGGTTTCCAAG
TACCAGCTGGATCCCTCAAGCCCTCTGCCTCCCCCTCATCCACTCTTCTC
TCAGATAGGGAGGTCATTGGGGATCCGGAAAAAGCAAACAAAGAATCCAA
CGTATTAGTCATCGGCTGGTATGGTGACAACGATCCAGAGAAACCACACA
ACTGGTCCTTCGGAAAGAAGCTCTGGGTTTCCATGTTGCTCTTTGTCTAC
ACCTTCTCCGTTTATATTGGCTCCTCGCTATATACTGCCAGTGAGCCGGA
CATCATGCGGATCTATGGTGTTGGTGACGAAGTGGCCGAGCTGGGATTAA
CCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTTCTCGCCTCTG
TCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTGTCACTTATTT
CCTCTTCGTCATTCTCTGCATTCCTATGGCTCTGGTTAATAATATTGCGG
GTATTCATATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTCGCCCTGCCTG
GCTACGGCCGGCGCAAGCTATGGCGATTTCTACGGCGCAAAACAAATGCC
CTATGTCATTGCTTTATGGGGAGGAGGTGCGACTTTGGGCCCGGCCCTCG
GACCCCTCGTCGCCGGATTCGCCGTCGAAAAAATGGGCTGGCGCTGGAGC
TCCTGGGAACTTCTCTGGCTATCCGCCCCTACAATGGTGATCATGTTCCT
CAGTATGCCCGAGACATCATCAGACAACATCCTGCTCCGTCGCGCTCGAC
GCCTACGCACTCAAACAGGTCGCATAGACATCAAGTCCGAGTCCGAGATT
CGTCAGTCAAAGATGAGTCCAAGAGCAATTACTTTCAACGCTCTCATCAA
ACCATGGGAGATAAACGCTCTTGACCCTGCTGTTCTTTTCTCAACCTTTT
ACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTCCCC
CTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCAGGGTCTCGC
ATTCCTTGCTGTGCTGTGCGGTCTCTGTGTTGCGGTCGGTCTTCTATGCG
CATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCTGTG
CCTCCTGAAGCTCGTATTTGGCCGGGATTGTTCGCGACATGGCTTATTCC
AACGGGATTATATATCTTTGCATGGACCTCCTCCCCCTCCATCCATTGGA
TCGTCAGCCTGGTCGGCATCGCCATCAGCATGTGCGGCGTCTTTATCATC
ACCCAGTGCATGTTCATCTACCTCCCCTTCACGTATCCTCGATACGCGGG
CTCGCTGTTCGCCGCCAACGGCTTCGCGCGCAGTCTACTTGCTGGTGCTT
CTATTCTCTTCTCTCGCCCAATGTTCCAGGGGATTAAGGTCTCTGGTGGA
GTGAGTCTGCTTGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCT
GCTTTACTTTTTCGGGGCGCGGTTGCGGGAGAGGAGTCGGTTTACGGGGC
TGTGAATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCCTACGG
CTAGCCAGTGGTGGGAAGCTGGCCGGATACCCTGAGGAGCAACCTGGTTT
CCAAGTACCAGCTGGATCCCTCAAGCCCTCTGCCTCCCCCTCATCCACTC
TTCTCTCAGATAGGGAGGTCATTGGGGATCCGGAAAAAGCAAACAAAGAA
TCCAACGTATTAGTCATCGGCTGGTATGGTGACAACGATCCAGAGAAACC
ACACAACTGGTCCTTCGGAAAGAAGCTCTGGGTTTCCATGTTGCTCTTTG
TCTACACCTTCTCCGTTTATATTGGCTCCTCGCTATATACTGCCAGTGAG
CCGGACATCATGCGGATCTATGGTGTTGGTGACGAAGTGGCCGAGCTGGG
ATTAACCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTTCTCGC
CTCTGTCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTGTCACT
TATTTCCTCTTCGTCATTCTCTGCATTCCTATGGCTCTGGTTAATAATAT
TGCGGGTATTCATATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTCGCCCT
GCCTGGCTACGGCCGGCGCAAGCTATGGCGATTTCTACGGCGCAAAACAA
ATGCCCTATGTCATTGCTTTATGGGGAGGAGGTGCGACTTTGGGCCCGGC
CCTCGGACCCCTCGTCGCCGGATTCGCCGTCGAAAAAATGGGCTGGCGCT
GGAGCTCCTGGGAACTTCTCTGGCTATCCGCCCCTACAATGGTGATCATG
TTCCTCAGTATGCCCGAGACATCATCAGACAACATCCTGCTCCGTCGCGC
TCGACGCCTACGCACTCAAACAGGTCGCATAGACATCAAGTCCGAGTCCG
AGATTCGTCAGTCAAAGATGAGTCCAAGAGCAATTACTTTCAACGCTCTC
ATCAAACCATGGGAGATAAACGCTCTTGACCCTGCTGTTCTTTTCTCAAC
CTTTTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCT
TCCCCCTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCAGGGT
CTCGCATTCCTTGCTGTGCTGTGCGGTCTCTGTGTTGCGGTCGGTCTTCT
ATGCGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATC
CTGTGCCTCCTGAAGCTCGTATTTGGCCGGGATTGTTCGCGACATGGCTT
ATTCCAACGGGATTATATATCTTTGCATGGACCTCCTCCCCCTCCATCCA
TTGGATCGTCAGCCTGGTCGGCATCGCCATCAGCATGTGCGGCGTCTTTA
TCATCACCCAGTGCATGTTCATCTACCTCCCCTTCACGTATCCTCGATAC
GCGGGCTCGCTGTTCGCCGCCAACGGCTTCGCGCGCAGTCTACTTGCTGG
TGCTTCTATTCTCTTCTCTCGCCCAATGTTCCAGGGGATTAAGGTCTCTG
GTGGAGTGAGTCTGCTTGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATG
TTCCTGCTTTACTTTTTCGGGGCGCGGTTGCGGGAGAGGAGTCGGTTTAC
GGGGCTGTGAATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCC
TACGGCTAGCCAGTGGTGGGAAGCTGGCCGGATACCCTGAGGAGCAACCT
GGTTTCCAAGTACCAGCTGGATCCCTCAAGCCCTCTGCCTCCCCCTCATC
CACTCTTCTCTCAGATAGGGAGGTCATTGGGGATCCGGAAAAAGCAAACA
AAGAATCCAACGTATTAGTCATCGGCTGGTATGGTGACAACGATCCAGAG
AAACCACACAACTGGTCCTTCGGAAAGAAGCTCTGGGTTTCCATGTTGCT
CTTTGTCTACACCTTCTCCGTTTATATTGGCTCCTCGCTATATACTGCCA
GTGAGCCGGACATCATGCGGATCTATGGTGTTGGTGACGAAGTGGCCGAG
CTGGGATTAACCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTT
CTCGCCTCTGTCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTG
TCACTTATTTCCTCTTCGTCATTCTCTGCATTCCTATGGCTCTGGTTAAT
AATATTGCGGGTATTCATATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTC
GCCCTGCCTGGCTACGGCCGGCGCAAGCTATGGCGATTTCTACGGCGCAA
AACAAATGCCCTATGTCATTGCTTTATGGGGAGGAGGTGCGACTTTGGGC
CCGGCCCTCGGACCCCTCGTCGCCGGATTCGCCGTCGAAAAAATGGGCTG
GCGCTGGAGCTCCTGGGAACTTCTCTGGCTATCCGCCCCTACAATGGTGA
TCATGTTCCTCAGTATGCCCGAGACATCATCAGACAACATCCTGCTCCGT
CGCGCTCGACGCCTACGCACTCAAACAGGTCGCATAGACATCAAGTCCGA
GTCCGAGATTCGTCAGTCAAAGATGAGTCCAAGAGCAATTACTTTCAACG
CTCTCATCAAACCATGGGAGATAAACGCTCTTGACCCTGCTGTTCTTTTC
TCAACCTTTTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGA
GTCCTTCCCCCTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGC
AGGGTCTCGCATTCCTTGCTGTGCTGTGCGGTCTCTGTGTTGCGGTCGGT
CTTCTATGCGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCT
TGATCCTGTGCCTCCTGAAGCTCGTATTTGGCCGGGATTGTTCGCGACAT
GGCTTATTCCAACGGGATTATATATCTTTGCATGGACCTCCTCCCCCTCC
ATCCATTGGATCGTCAGCCTGGTCGGCATCGCCATCAGCATGTGCGGCGT
CTTTATCATCACCCAGTGCATGTTCATCTACCTCCCCTTCACGTATCCTC
GATACGCGGGCTCGCTGTTCGCCGCCAACGGCTTCGCGCGCAGTCTACTT
GCTGGTGCTTCTATTCTCTTCTCTCGCCCAATGTTCCAGGGGATTAAGGT
CTCTGGTGGAGTGAGTCTGCTTGCGAGTCTTAGTGTTTTTTGTATTGTGG
GTATGTTCCTGCTTTACTTTTTCGGGGCGCGGTTGCGGGAGAGGAGTCGG
TTTACGGGGCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2385232..2386979 + |
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