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KJC3_003602-T1, KJC3_003602-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003602-T1
Unique NameKJC3_003602-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2397171..2399876-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003602-T1 ID=KJC3_003602-T1|Name=KJC3_003602-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2706bp|location=Sequence derived from alignment at ch3:2397171..2399876- (Aspergillus niger KJC3)
AACGAAATGACGCAGGATATCTGTGCCCCTTAGCAACCGCGTGAGACAAC
TGTGCTGCTTCTTCTGACATAAATCCGGGCAGAAAAGCTTATGCGTAAGA
CTCCTCACATATGTGTCTCTAAATATGCATCTGGAGAGGTCTCGGTGAAG
AAAATTGAAGTTATTTCATCCACTGACTGTGTTCAGATGGCTAGAGTTGT
GTGTATATAGCGACATCCCAAACGGGTAACCTATGCCTTTTATGCCTCAG
GCACAAACGGAGATACGAAGGTGACGTCAGCCATCACGACGCAAGATTCG
CTCTTCATTCTTCCTTTTGCTTTAGACAAGAGCGCACCAAACACAGCAAG
CACGATGCTCTACCCTCATTATTGACACCATCCTGGTACTCTCGTATTCG
ATTTCTACAACGACCGATCGGAGTGTCTTCTTAGCTTGAGAGTCGTCGTT
CTATGCAACCATCCAGCCTGTCTTCGGCCACGAGACACATCTAGCGCTGT
CGCAAGCTAGACGCCCCGATGATTTCCCATAAAATCACAATCGCATATTC
AGGGATCTATATATATGAAATAATCTGGAAGTGATCTGTACAGTGGCCTC
ACGTTGTGGTTTCTTACACTTCCTTTATATAGCAACTCTCGTTGGACCCA
ACCACAATGAATATATAGCTTGGTCATGTCCGAAACTACAGCAAGTTCTC
CTGCACAGGATGACGATCCAGGGGAATCTGGTCCCAGCTTTTTAAACTGC
CCGCCTATCTTTGTGCTTCCGACCCATCTCAGTCTGGAATCGCTTCACGG
CATAGAAGAGAAGCTGGTTAAGCGAGAAGCACCTCTGACCTACGACATAT
CCGAAGCCAGACTGGTACTTGGGAGAATCGGACAAGGCAAACGAGCGGCT
TTAGAACTACGATCTCGAGGATTATGGACCGAACCTATCAATAAACCCGA
GCCCCCCAGGAAGCGGCGTCGTGTCAATGCAGCTGAGTCGAAAAAGCCCG
CAGACCAGGCCGACATTATCGACCTCAGCACGGAGACAGAAGACGAAGAA
GATGGGATGAAAAGTCGGCATGACCCCTCGCGGCATCTCCATCGGACGCA
GACTGATTCCCCCGCCGCGGAATCTACTATTTCCAATCCGTCTGACGCGT
CTTCTGTGTCATCCTCCGTTGCACAAGCAGACACTATCAGCGTCGTCAAA
CTAGACTGGCTGGACCAATGTCTCAAGACGCAAGAGCTCCTTCCTACCGA
TCCATATACGATTTACATCGCCCGACGGGCTCCACGTCCCGCAGAGCCCC
CGAAACCAACCTCCCTAGGGAGCGATATTCTCCAACGAGCTAGGCAAGAT
GCCGCATTACGACCGCCACCAAAGCCACCGACCGTATATCATCATCCGCG
TACTCACGATTCGACTCACAACCCGCCCAAATTATATCGAACTACCACCT
CGGAGAACGAGGAAACCGAGTCCCTTCCCCCAGCCCCAGACTGGGTGAAG
GAGCACGTCCTCTACGCCTGCCTGCGCTCCGCACCCCTTCACCCTCCAAA
CGAAGGCTTCATCAACCAGCTGATCAAAATCCGACAAATTCGCGAATTAA
CACTCGACGAAATCGGCGTCCGCGCCTACAGCACCTCTATCGCGGCAATC
GCAGCCTATCCACACGAATTCCGCCGCCCCTCCGAGGTCCTCACCCTCCC
AGGCTGCGACACCAAAATCGCCAACCTCTTCTACGAATACCAAGAAAGCC
CAACGGGCACCCTCTCAGCCGCATCTCTCCTAGACACCGACCCGACCCTC
CGCATCCTCAACACCTTCTACAACATCTGGGGCGTCGGCGCCAAAACCGC
CCGCGAACTCTACTACTACCGCCACTGGACGGACCTCGACGACATCATCG
AACACGGCTGGAGCAGCCTCACGCGCGTCCAACAAATCGGAGTAAAATAC
TACGACGAGTTTCTAATCGGAATCCCCCGCCCCGAAGTCGAACAAATCGC
CACAACAGTAACCCAACACGCCAATCTCGTCCGCCCAACCTCCTTCGACA
ACGAAGAAAAGGGCATCCAATGCATAATCGTAGGCGGCTATCGTCGTGGA
AAACCCCTCTGCGGCGACGTCGACCTCATCCTCACCCACCCGGACGAATC
TCTAACCAAGAACCTGGTCCTCGACGTAGTCGCCAGCCTCGAATCCTCCG
GCTGGATCACCCACACCCTAGCCCTCCACTTAATGACCTCTAACCGCGAC
CAACAAACCCTCCCCTACCGGGCAAGTAATGCCGACAGCACGGGGAAGAA
CTTCGATACATTAGATAAAGCCCTCGTCGTATGGCAGGATCCTCACTTCG
ACGACGCTGATACCCCTCAGAACCAATCAGAAACCCCAGAAGAAGAACAT
TACACAAGAAGTAAACGAAACCCAAACCCTCACCGCAGAGTAGACATCAT
TATTTCCCCCTGGCGAACAGTCGGGTGTGCCGTGCTCGGCTGGTCAGGCG
ATAAGACCTTCGAGCGAGATCTACGGCGGTATGTGAAGAAAGCGCATGGG
TGGAAGTTCGATTCGAGTGGGGTTAGGGAAAGGACGTCGGGGGGTCAGGT
TGTTGATCTTGAGGGCGACGGGGAGACGTGGGAGGAGAGGGAGAGGTTGG
TTATGGAGGGGCTGGGGGTTGGGTGGAGAAGGCCAGAGGAGAGGTGTACC
CGGTGA
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Coding sequence (CDS) from alignment at ch3:2397171..2399876-

>KJC3_003602-T1 ID=KJC3_003602-T1|Name=KJC3_003602-T1|organism=Aspergillus niger KJC3|type=CDS|length=2031bp|location=Sequence derived from alignment at ch3:2397171..2399876- (Aspergillus niger KJC3)
ATGTCCGAAACTACAGCAAGTTCTCCTGCACAGGATGACGATCCAGGGGA
ATCTGGTCCCAGCTTTTTAAACTGCCCGCCTATCTTTGTGCTTCCGACCC
ATCTCAGTCTGGAATCGCTTCACGGCATAGAAGAGAAGCTGGTTAAGCGA
GAAGCACCTCTGACCTACGACATATCCGAAGCCAGACTGGTACTTGGGAG
AATCGGACAAGGCAAACGAGCGGCTTTAGAACTACGATCTCGAGGATTAT
GGACCGAACCTATCAATAAACCCGAGCCCCCCAGGAAGCGGCGTCGTGTC
AATGCAGCTGAGTCGAAAAAGCCCGCAGACCAGGCCGACATTATCGACCT
CAGCACGGAGACAGAAGACGAAGAAGATGGGATGAAAAGTCGGCATGACC
CCTCGCGGCATCTCCATCGGACGCAGACTGATTCCCCCGCCGCGGAATCT
ACTATTTCCAATCCGTCTGACGCGTCTTCTGTGTCATCCTCCGTTGCACA
AGCAGACACTATCAGCGTCGTCAAACTAGACTGGCTGGACCAATGTCTCA
AGACGCAAGAGCTCCTTCCTACCGATCCATATACGATTTACATCGCCCGA
CGGGCTCCACGTCCCGCAGAGCCCCCGAAACCAACCTCCCTAGGGAGCGA
TATTCTCCAACGAGCTAGGCAAGATGCCGCATTACGACCGCCACCAAAGC
CACCGACCGTATATCATCATCCGCGTACTCACGATTCGACTCACAACCCG
CCCAAATTATATCGAACTACCACCTCGGAGAACGAGGAAACCGAGTCCCT
TCCCCCAGCCCCAGACTGGGTGAAGGAGCACGTCCTCTACGCCTGCCTGC
GCTCCGCACCCCTTCACCCTCCAAACGAAGGCTTCATCAACCAGCTGATC
AAAATCCGACAAATTCGCGAATTAACACTCGACGAAATCGGCGTCCGCGC
CTACAGCACCTCTATCGCGGCAATCGCAGCCTATCCACACGAATTCCGCC
GCCCCTCCGAGGTCCTCACCCTCCCAGGCTGCGACACCAAAATCGCCAAC
CTCTTCTACGAATACCAAGAAAGCCCAACGGGCACCCTCTCAGCCGCATC
TCTCCTAGACACCGACCCGACCCTCCGCATCCTCAACACCTTCTACAACA
TCTGGGGCGTCGGCGCCAAAACCGCCCGCGAACTCTACTACTACCGCCAC
TGGACGGACCTCGACGACATCATCGAACACGGCTGGAGCAGCCTCACGCG
CGTCCAACAAATCGGAGTAAAATACTACGACGAGTTTCTAATCGGAATCC
CCCGCCCCGAAGTCGAACAAATCGCCACAACAGTAACCCAACACGCCAAT
CTCGTCCGCCCAACCTCCTTCGACAACGAAGAAAAGGGCATCCAATGCAT
AATCGTAGGCGGCTATCGTCGTGGAAAACCCCTCTGCGGCGACGTCGACC
TCATCCTCACCCACCCGGACGAATCTCTAACCAAGAACCTGGTCCTCGAC
GTAGTCGCCAGCCTCGAATCCTCCGGCTGGATCACCCACACCCTAGCCCT
CCACTTAATGACCTCTAACCGCGACCAACAAACCCTCCCCTACCGGGCAA
GTAATGCCGACAGCACGGGGAAGAACTTCGATACATTAGATAAAGCCCTC
GTCGTATGGCAGGATCCTCACTTCGACGACGCTGATACCCCTCAGAACCA
ATCAGAAACCCCAGAAGAAGAACATTACACAAGAAGTAAACGAAACCCAA
ACCCTCACCGCAGAGTAGACATCATTATTTCCCCCTGGCGAACAGTCGGG
TGTGCCGTGCTCGGCTGGTCAGGCGATAAGACCTTCGAGCGAGATCTACG
GCGGTATGTGAAGAAAGCGCATGGGTGGAAGTTCGATTCGAGTGGGGTTA
GGGAAAGGACGTCGGGGGGTCAGGTTGTTGATCTTGAGGGCGACGGGGAG
ACGTGGGAGGAGAGGGAGAGGTTGGTTATGGAGGGGCTGGGGGTTGGGTG
GAGAAGGCCAGAGGAGAGGTGTACCCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO:0003887DNA-directed DNA polymerase activity
GO:0003677DNA binding
GO:0034061DNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003602KJC3_003602Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003602-T1.cdsKJC3_003602-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003602-T1.exon2KJC3_003602-T1.exon2Aspergillus niger KJC3exon
KJC3_003602-T1.exon1KJC3_003602-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003602-T1.utr5p2KJC3_003602-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003602-T1.utr5p1KJC3_003602-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003602-T1KJC3_003602-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001357
DBxrefInterPro:IPR019843
DBxrefInterPro:IPR018944
DBxrefInterPro:IPR037160
DBxrefInterPro:IPR028207
DBxrefInterPro:IPR043519
DBxrefInterPro:IPR027421
DBxrefInterPro:IPR036420
DBxrefInterPro:IPR029398
DBxrefInterPro:IPR002054
DBxrefInterPro:IPR022312
DBxrefPFAM:PF10391
DBxrefPFAM:PF14791
DBxrefPFAM:PF14792
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2397171..2399876 -
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