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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2418061..2419266- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003612-T1 ID=KJC3_003612-T1|Name=KJC3_003612-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1206bp|location=Sequence derived from alignment at ch3:2418061..2419266- (Aspergillus niger KJC3)
ATGGTATCCCTTGAAGCTGTCCGCGCTCACAACAGCAATTTAGAAGATCT
CGGCACGGGACTCGTTGCTGTATTTGGTGCGTTCAACCCCTCTTGAGACG
CTGTAGCTGATGTTCCAGTCGGTGGTACGAGTGGAATTGGACTCTACGCT
GCGCGTGAATTCGTCCGCCATACTCTATCTCCGACGGTCTATCTAGTTGG
CCGCAACGAGATTCGCGCAACAGAGATCATTGACGACTTGAAGTCGCTGA
ATCCGAGCTCCCAGATTAGATTTCTCAAAGCGGACGTATCGCTATTGAAG
GAGGTGGACTCGACATGTGCCGTGATTCGAAGCCAGGTCAACCATGTCAA
CGTGTTATTCCTCAGCTGCGGTATTTTTACGCTCAACCGTAGTAGAGAAG
GTGCGTCTGAGAGTCGAGTCGTCCCTAGACCTTAAATAGTTACCTTCATA
ATCTAATCTAATTCGCCATACATACAGACACCTCGGAAGGCCTCGACAAA
AAGCTCAGTCTCCATTACTACGCTCGCATGCGCTTCATCCACAACCTAAT
GCCGCAGTTGACCCGCGCCAGCTGTGTCCCTTGCTCTGAGGGTAGTCGTA
ACCTCTCCCGGGTTATATCCGTTCTAGGCGGTGGCCATGAAACAGAGCTA
TATCTTGACGATCTCGACCTGCAGAATCACTACGGGGTCGAGAATTGCGA
TGTCCACGCAACAACCATGACATCCTTAATGGTCGAAGAGCTTGCGTCGC
GGTATCCGTCGACGACATTTATCCACACGTATCCTGGGATTGTGAATTCG
GGGATCTCTCGCGAAGCGGGCCGATTCGTAGGCTGCATTGTCAAGGCCGT
ATTGTTTCTAGGTCGGCCGTGGATGGTGTCGGAGAAGGAGAGCGGCGAGC
GGAGTCTTTTTGCGGCAACGAGTAGAGAGCTCTCTACGTCTGCGAAGAGT
ACCACTGGAGATGGCAAAGGGGGTGCTATGATACTGAACTGGGACGGGTC
TGAGGTGGGCAATCGAAGGCTCCTCGAGGAGTATCGGAAAAAGGGTGTTG
GTGATATGGTGTGGAAGCATACGGAGGAGATTTTTCTGAAGGCTTCCAAG
GCTCCTTCTTGAAACTATGGACATCGGTAAGCGAAAGGTGCTGGTAAAGA
GTATTTCATACTCAATATTTGACAGGCACTGCCTGCTAGGTGGCCTAGAA
AATCGG back to topCoding sequence (CDS) from alignment at ch3:2418061..2419266- >KJC3_003612-T1 ID=KJC3_003612-T1|Name=KJC3_003612-T1|organism=Aspergillus niger KJC3|type=CDS|length=2979bp|location=Sequence derived from alignment at ch3:2418061..2419266- (Aspergillus niger KJC3)
ACACCTCGGAAGGCCTCGACAAAAAGCTCAGTCTCCATTACTACGCTCGC
ATGCGCTTCATCCACAACCTAATGCCGCAGTTGACCCGCGCCAGCTGTGT
CCCTTGCTCTGAGGGTAGTCGTAACCTCTCCCGGGTTATATCCGTTCTAG
GCGGTGGCCATGAAACAGAGCTATATCTTGACGATCTCGACCTGCAGAAT
CACTACGGGGTCGAGAATTGCGATGTCCACGCAACAACCATGACATCCTT
AATGGTCGAAGAGCTTGCGTCGCGGTATCCGTCGACGACATTTATCCACA
CGTATCCTGGGATTGTGAATTCGGGGATCTCTCGCGAAGCGGGCCGATTC
GTAGGCTGCATTGTCAAGGCCGTATTGTTTCTAGGTCGGCCGTGGATGGT
GTCGGAGAAGGAGAGCGGCGAGCGGAGTCTTTTTGCGGCAACGAGTAGAG
AGCTCTCTACGTCTGCGAAGAGTACCACTGGAGATGGCAAAGGGGGTGCT
ATGATACTGAACTGGGACGGGTCTGAGGTGGGCAATCGAAGGCTCCTCGA
GGAGTATCGGAAAAAGGGTGTTGGTGATATGGTGTGGAAGCATACGGAGG
AGATTTTTCTGAAGGCTTCCAAGGCTCCTTCTTGATCGGTGGTACGAGTG
GAATTGGACTCTACGCTGCGCGTGAATTCGTCCGCCATACTCTATCTCCG
ACGGTCTATCTAGTTGGCCGCAACGAGATTCGCGCAACAGAGATCATTGA
CGACTTGAAGTCGCTGAATCCGAGCTCCCAGATTAGATTTCTCAAAGCGG
ACGTATCGCTATTGAAGGAGGTGGACTCGACATGTGCCGTGATTCGAAGC
CAGGTCAACCATGTCAACGTGTTATTCCTCAGCTGCGGTATTTTTACGCT
CAACCGTAGTAGAGAAGATGGTATCCCTTGAAGCTGTCCGCGCTCACAAC
AGCAATTTAGAAGATCTCGGCACGGGACTCGTTGCTGTATTTGACACCTC
GGAAGGCCTCGACAAAAAGCTCAGTCTCCATTACTACGCTCGCATGCGCT
TCATCCACAACCTAATGCCGCAGTTGACCCGCGCCAGCTGTGTCCCTTGC
TCTGAGGGTAGTCGTAACCTCTCCCGGGTTATATCCGTTCTAGGCGGTGG
CCATGAAACAGAGCTATATCTTGACGATCTCGACCTGCAGAATCACTACG
GGGTCGAGAATTGCGATGTCCACGCAACAACCATGACATCCTTAATGGTC
GAAGAGCTTGCGTCGCGGTATCCGTCGACGACATTTATCCACACGTATCC
TGGGATTGTGAATTCGGGGATCTCTCGCGAAGCGGGCCGATTCGTAGGCT
GCATTGTCAAGGCCGTATTGTTTCTAGGTCGGCCGTGGATGGTGTCGGAG
AAGGAGAGCGGCGAGCGGAGTCTTTTTGCGGCAACGAGTAGAGAGCTCTC
TACGTCTGCGAAGAGTACCACTGGAGATGGCAAAGGGGGTGCTATGATAC
TGAACTGGGACGGGTCTGAGGTGGGCAATCGAAGGCTCCTCGAGGAGTAT
CGGAAAAAGGGTGTTGGTGATATGGTGTGGAAGCATACGGAGGAGATTTT
TCTGAAGGCTTCCAAGGCTCCTTCTTGATCGGTGGTACGAGTGGAATTGG
ACTCTACGCTGCGCGTGAATTCGTCCGCCATACTCTATCTCCGACGGTCT
ATCTAGTTGGCCGCAACGAGATTCGCGCAACAGAGATCATTGACGACTTG
AAGTCGCTGAATCCGAGCTCCCAGATTAGATTTCTCAAAGCGGACGTATC
GCTATTGAAGGAGGTGGACTCGACATGTGCCGTGATTCGAAGCCAGGTCA
ACCATGTCAACGTGTTATTCCTCAGCTGCGGTATTTTTACGCTCAACCGT
AGTAGAGAAGATGGTATCCCTTGAAGCTGTCCGCGCTCACAACAGCAATT
TAGAAGATCTCGGCACGGGACTCGTTGCTGTATTTGACACCTCGGAAGGC
CTCGACAAAAAGCTCAGTCTCCATTACTACGCTCGCATGCGCTTCATCCA
CAACCTAATGCCGCAGTTGACCCGCGCCAGCTGTGTCCCTTGCTCTGAGG
GTAGTCGTAACCTCTCCCGGGTTATATCCGTTCTAGGCGGTGGCCATGAA
ACAGAGCTATATCTTGACGATCTCGACCTGCAGAATCACTACGGGGTCGA
GAATTGCGATGTCCACGCAACAACCATGACATCCTTAATGGTCGAAGAGC
TTGCGTCGCGGTATCCGTCGACGACATTTATCCACACGTATCCTGGGATT
GTGAATTCGGGGATCTCTCGCGAAGCGGGCCGATTCGTAGGCTGCATTGT
CAAGGCCGTATTGTTTCTAGGTCGGCCGTGGATGGTGTCGGAGAAGGAGA
GCGGCGAGCGGAGTCTTTTTGCGGCAACGAGTAGAGAGCTCTCTACGTCT
GCGAAGAGTACCACTGGAGATGGCAAAGGGGGTGCTATGATACTGAACTG
GGACGGGTCTGAGGTGGGCAATCGAAGGCTCCTCGAGGAGTATCGGAAAA
AGGGTGTTGGTGATATGGTGTGGAAGCATACGGAGGAGATTTTTCTGAAG
GCTTCCAAGGCTCCTTCTTGATCGGTGGTACGAGTGGAATTGGACTCTAC
GCTGCGCGTGAATTCGTCCGCCATACTCTATCTCCGACGGTCTATCTAGT
TGGCCGCAACGAGATTCGCGCAACAGAGATCATTGACGACTTGAAGTCGC
TGAATCCGAGCTCCCAGATTAGATTTCTCAAAGCGGACGTATCGCTATTG
AAGGAGGTGGACTCGACATGTGCCGTGATTCGAAGCCAGGTCAACCATGT
CAACGTGTTATTCCTCAGCTGCGGTATTTTTACGCTCAACCGTAGTAGAG
AAGATGGTATCCCTTGAAGCTGTCCGCGCTCACAACAGCAATTTAGAAGA
TCTCGGCACGGGACTCGTTGCTGTATTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003612-T1.utr3p1 | KJC3_003612-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2418061..2419266 - |
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