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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2476694..2477357+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003638-T1 ID=KJC3_003638-T1|Name=KJC3_003638-T1|organism=Aspergillus niger KJC3|type=mRNA|length=664bp|location=Sequence derived from alignment at ch3:2476694..2477357+ (Aspergillus niger KJC3)
ATGTCCTATTACTTCACAATCCTCTCCCCGACGGACGTCCCCCTCTTCAA
CATCGCCTTCGGCACATCCAAATCCGGGGGTGACGGGATCGCCCGTTTCC
GATTCCCTGATACAGCGCAGTACATGAACCAGTTCATTATCCATTCGAGT
TTGGATATTGTGGAGGAAGCGCAGTGGATGAATGGGAATATGTATATCCC
CTTTTTCTTAATATATTGATAAGTACTGGGCGTAATTGGCCATTATGCTG
ATATCGATGTTGTTTCATGGCAGGTACCTAAAACACATCGACACCTACCC
CCCCGCATCAGCATACATCTCCGCCTTCCTGACCCCCTCCGGGGCAAGGT
TCCTTCTTCTGCATCAGCCGCCCCAGTTAGCTTCGAATAGCGGTCAGGGA
GGGAGTGGGAGTGGTTCGATGGGCGGGTCGATGTCTGGGTCGCTGTTGTT
GGGATCTTCGGGCGGGTCGTCGCGCGCGTCTGCGAGCTCGATAGCTAATA
ATCCGACGTCGCCGCAGACGGAGGAAGCCGTGCGTCAGTTTATGACTGAG
GTGTATGAGAATTATGTGAAGACGGTCATGAGTCCGTTTTATAGACAGGG
AATGGAGATTAAGAGCCCGGTGTTTAGGGGGAGGGTTACGGCTGCGGGGA
GGAAGTGGTTATAG back to topCoding sequence (CDS) from alignment at ch3:2476694..2477357+ >KJC3_003638-T1 ID=KJC3_003638-T1|Name=KJC3_003638-T1|organism=Aspergillus niger KJC3|type=CDS|length=1164bp|location=Sequence derived from alignment at ch3:2476694..2477357+ (Aspergillus niger KJC3)
ATGTCCTATTACTTCACAATCCTCTCCCCGACGGACGTCCCCCTCTTCAA
CATCGCCTTCGGCACATCCAAATCCGGGGGTGACGGGATCGCCCGTTTCC
GATTCCCTGATACAGCGCAGTACATGAACCAGTTCATTATCCATTCGAGT
TTGGATATTGTGGAGGAAGCGCAGTGGATGAATGGGAATATGTACCTAAA
ACACATCGACACCTACCCCCCCGCATCAGCATACATCTCCGCCTTCCTGA
CCCCCTCCGGGGCAAGGTTCCTTCTTCTGCATCAGCCGCCCCAGTTAGCT
TCGAATAGCGGTCAGGGAGGGAGTGGGAGTGGTTCGATGGGCGGGTCGAT
GTCTGGGTCGCTGTTGTTGGGATCTTCGGGCGGGTCGTCGCGCGCGTCTG
CGAGCTCGATAGCTAATAATCCGACGTCGCCGCAGACGGAGGAAGCCGTG
CGTCAGTTTATGACTGAGGTGTATGAGAATTATGTGAAGACGGTCATGAG
TCCGTTTTATAGACAGGGAATGGAGATTAAGAGCCCGGTGTTTAGGGGGA
GGGTTACGGCTGCGGGGAGGAAGTGGTTATAGATGTCCTATTACTTCACA
ATCCTCTCCCCGACGGACGTCCCCCTCTTCAACATCGCCTTCGGCACATC
CAAATCCGGGGGTGACGGGATCGCCCGTTTCCGATTCCCTGATACAGCGC
AGTACATGAACCAGTTCATTATCCATTCGAGTTTGGATATTGTGGAGGAA
GCGCAGTGGATGAATGGGAATATGTACCTAAAACACATCGACACCTACCC
CCCCGCATCAGCATACATCTCCGCCTTCCTGACCCCCTCCGGGGCAAGGT
TCCTTCTTCTGCATCAGCCGCCCCAGTTAGCTTCGAATAGCGGTCAGGGA
GGGAGTGGGAGTGGTTCGATGGGCGGGTCGATGTCTGGGTCGCTGTTGTT
GGGATCTTCGGGCGGGTCGTCGCGCGCGTCTGCGAGCTCGATAGCTAATA
ATCCGACGTCGCCGCAGACGGAGGAAGCCGTGCGTCAGTTTATGACTGAG
GTGTATGAGAATTATGTGAAGACGGTCATGAGTCCGTTTTATAGACAGGG
AATGGAGATTAAGAGCCCGGTGTTTAGGGGGAGGGTTACGGCTGCGGGGA
GGAAGTGGTTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265GGX |
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR006722 |
| DBxref | PFAM:PF04628 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2476694..2477357 + |
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