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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2518507..2520276+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003648-T1 ID=KJC3_003648-T1|Name=KJC3_003648-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1770bp|location=Sequence derived from alignment at ch3:2518507..2520276+ (Aspergillus niger KJC3)
CTGGATGCCGCGAAGATCTCCCTCCCTCTTCCCCTAAATCAAGGTTTCTC
TCAATCTTCCTCTCACTCTCCTCCTCTTCCTCCCCGACGTCTCTCTTCCT
AGTCCACCTCCGCTTCCTCCTCCCCCTCCTTCCCGCCACCCCTACTGCCG
GGTCATGCACCGTCTTTGCGGCCCTCTCGCCTGACCTCGTCATCCCCAAA
CCCGCATTCCCCAGAGAACCCCAGGTTAGATTTGCCCCGAGCCCACCCTT
TGGATATAAAGTCCCCCTCTAACCCGTTCCTGATGCAGATCAGCCGGCAC
TCTCTCCCCACTTCAGGACCACCACCATGTCCCTCTTTTCCTACGTCGCC
TCGGGCATCAGCTCCTTCGTCGTCTTCACACTCTCGCTCTTCGCCCTCGG
CCAGAAAGTCCCCCGCGCCGCCTTCGTCGCCCGGTGTCTCGCCGCCTATG
GCTCCCTTCTCCTCTGCGCCACCTACGGCGTCCTAGCCTCAATTGTGCTC
CGTATCGCTGGCTACGGCCGCATCTCCCAATGGGCCACCGCGCGCAGTTT
CAAGTGGGTTATGCGCTACACCACCGGCGTGCGCTTCAACATTGTCGAAG
GCGCTGAACACCTGAACACCCGGCCCGCCGTCTTCATTGGAAACCACCAG
TCCGAACTGGATGTGCTCATGCTCGGCTACATCTTCCCTCCGTACTGCAG
CGTCACGGCCAAGAAGTCCCTCAAACATATTCCCTTCCTCGGCTGGTTCA
TGGCCCTCTCTCGCACCGTCTTCATTGATCGTGCCAACCGCGAAACGGCC
GTCAAGGCTTTCGATAGTGCTGCCGATGAGATGCGCAACCATCGCCAGAG
TGTCTTCATCTTCGCCGAGGGCACGCGCAGCTACTCTGATACTCCGGAGC
TGTTGCCGTTCAAGAAGGGCGCGTTCCATCTGGCGCTGAAGGCGGGTGTG
CCCATTGTTCCGGTCGTTACGGAAAACTACTCGCATGTGCTCTCTCCGCG
GAATATGAGGTTCGAGCCGGGCACGATCAAGATCAAGGGTAACCTTCCTC
CCATCATGAAAGTGGATCTATAGAATGGCATGCTAACTGGATATAGTCCT
CCCCCCAATCAGCACTGAAGGTCTCACGACCGCCGACATCGACGCTCTGA
CCAAGTCCACGCGCGAGTCCATGCTCAAGACCCTGCTCGAATTGGCCGAG
AAGAACGACCAGGAGGTGGAGTTGACGGTTGCCGCTAATGGCAAGTCCAC
TGCTGTGGAGCTGTAGGGAGAGCAAACAGATCAACTTTCTCAGGCTGACT
ATTGTTATTCCCGTCTTCTACGATTGCACGACACGAGTAATGCTTGAATT
GGCGAGACAGAGCGTGGATACCCTGGCTGGTTAGGGTATGCTAGAGACAA
CAACTGTTGATGGGGCGAGAACTGACTGGAGGGACATAATCCAGTAGAGA
GAAAGCGGCGGGGGGTCAAAGTAAAAGACATTGTCTTGGAGTTTGTCTGG
CCATTGCATGACGAGGCCATGGGCTTCTTTCCTAGAGTGTATATAGAGCA
TATTCTTAATGCTTTTAGACCGTCACATACACCTACACCTGCACCAACCT
AGTCTCATCCCTCGTATATACCATCCCATATAGCTAAATAAATAGATATC
TCACTCCAAACAAGCACACCTCCCCTCCGCACAATCCCTAACATCCCCCT
CAACATCCAACCTCCTCAATCCCTCCCACACATCTTTCCCTTCTCCCTCT
ATCCTCCCAACACCTCCCCC back to topCoding sequence (CDS) from alignment at ch3:2518507..2520276+ >KJC3_003648-T1 ID=KJC3_003648-T1|Name=KJC3_003648-T1|organism=Aspergillus niger KJC3|type=CDS|length=1764bp|location=Sequence derived from alignment at ch3:2518507..2520276+ (Aspergillus niger KJC3)
ATGTCCCTCTTTTCCTACGTCGCCTCGGGCATCAGCTCCTTCGTCGTCTT
CACACTCTCGCTCTTCGCCCTCGGCCAGAAAGTCCCCCGCGCCGCCTTCG
TCGCCCGGTGTCTCGCCGCCTATGGCTCCCTTCTCCTCTGCGCCACCTAC
GGCGTCCTAGCCTCAATTGTGCTCCGTATCGCTGGCTACGGCCGCATCTC
CCAATGGGCCACCGCGCGCAGTTTCAAGTGGGTTATGCGCTACACCACCG
GCGTGCGCTTCAACATTGTCGAAGGCGCTGAACACCTGAACACCCGGCCC
GCCGTCTTCATTGGAAACCACCAGTCCGAACTGGATGTGCTCATGCTCGG
CTACATCTTCCCTCCGTACTGCAGCGTCACGGCCAAGAAGTCCCTCAAAC
ATATTCCCTTCCTCGGCTGGTTCATGGCCCTCTCTCGCACCGTCTTCATT
GATCGTGCCAACCGCGAAACGGCCGTCAAGGCTTTCGATAGTGCTGCCGA
TGAGATGCGCAACCATCGCCAGAGTGTCTTCATCTTCGCCGAGGGCACGC
GCAGCTACTCTGATACTCCGGAGCTGTTGCCGTTCAAGAAGGGCGCGTTC
CATCTGGCGCTGAAGGCGGGTGTGCCCATTGTTCCGGTCGTTACGGAAAA
CTACTCGCATGTGCTCTCTCCGCGGAATATGAGGTTCGAGCCGGGCACGA
TCAAGATCAAGGTCCTCCCCCCAATCAGCACTGAAGGTCTCACGACCGCC
GACATCGACGCTCTGACCAAGTCCACGCGCGAGTCCATGCTCAAGACCCT
GCTCGAATTGGCCGAGAAGAACGACCAGGAGGTGGAGTTGACGGTTGCCG
CTAATGGCAAGTCCACTGCTGTGGAGCTGTAGATGTCCCTCTTTTCCTAC
GTCGCCTCGGGCATCAGCTCCTTCGTCGTCTTCACACTCTCGCTCTTCGC
CCTCGGCCAGAAAGTCCCCCGCGCCGCCTTCGTCGCCCGGTGTCTCGCCG
CCTATGGCTCCCTTCTCCTCTGCGCCACCTACGGCGTCCTAGCCTCAATT
GTGCTCCGTATCGCTGGCTACGGCCGCATCTCCCAATGGGCCACCGCGCG
CAGTTTCAAGTGGGTTATGCGCTACACCACCGGCGTGCGCTTCAACATTG
TCGAAGGCGCTGAACACCTGAACACCCGGCCCGCCGTCTTCATTGGAAAC
CACCAGTCCGAACTGGATGTGCTCATGCTCGGCTACATCTTCCCTCCGTA
CTGCAGCGTCACGGCCAAGAAGTCCCTCAAACATATTCCCTTCCTCGGCT
GGTTCATGGCCCTCTCTCGCACCGTCTTCATTGATCGTGCCAACCGCGAA
ACGGCCGTCAAGGCTTTCGATAGTGCTGCCGATGAGATGCGCAACCATCG
CCAGAGTGTCTTCATCTTCGCCGAGGGCACGCGCAGCTACTCTGATACTC
CGGAGCTGTTGCCGTTCAAGAAGGGCGCGTTCCATCTGGCGCTGAAGGCG
GGTGTGCCCATTGTTCCGGTCGTTACGGAAAACTACTCGCATGTGCTCTC
TCCGCGGAATATGAGGTTCGAGCCGGGCACGATCAAGATCAAGGTCCTCC
CCCCAATCAGCACTGAAGGTCTCACGACCGCCGACATCGACGCTCTGACC
AAGTCCACGCGCGAGTCCATGCTCAAGACCCTGCTCGAATTGGCCGAGAA
GAACGACCAGGAGGTGGAGTTGACGGTTGCCGCTAATGGCAAGTCCACTG
CTGTGGAGCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008654 | phospholipid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003841 | 1-acylglycerol-3-phosphate O-acyltransferase activity |
| GO:0016746 | transferase activity, transferring acyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003648-T1.utr3p1 | KJC3_003648-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004552 |
| DBxref | InterPro:IPR002123 |
| DBxref | PFAM:PF01553 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2518507..2520276 + |
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