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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2520157..2521361- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003649-T1 ID=KJC3_003649-T1|Name=KJC3_003649-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1205bp|location=Sequence derived from alignment at ch3:2520157..2521361- (Aspergillus niger KJC3)
CTTTTTTGCTTTGCTGTGATAATACGCTGGTTGCGGTCTTTAACATCAGA
CACTAAGATCATTCATTGGCGCAGTTAACCTCAGAATGTATCAATGACCC
TCGTGGAGAACTAACCCAACCCCTCACTTCACCTCATCTCACCTCCGCAT
AGACGCCCGATCTCCTCACATCAGCTACACCACTATATCTCACTCAATTG
AACACACCACCACCACAACAGCCTCATACCCAACCCAACTCACTCACAAT
GTCTACCTCATCCGACCCCAAACCCACCCTAGTCCGGTGGTACATCGACA
CCCGCCCCCTAACCGCCACCTCCAACGCCCTCCCCCTCCTCGACACCCTC
CAACCCACCGAACAACAAGCCATCCAGAAATACTATCACCTGAAGGACAG
ACACATGTCCCTCGCCTCCAACCTCCTCAAATACCTCTTCATCCACCGCA
CCTGCCGCATCCCCTGGTCCCAAATCACCATCAGCCGGACCCCAGCCCCG
CACCATCGACCCTGCTTCATCCCATCCGCAGCAGTCCTCTCCGCCTCCAG
CTCCTCAATCCCAACGGTCGAATTCAACGTCAGCCACCAGGACTCAATGG
TCGCCTTAGCCGGCACTACCATCCCACCCAATGCCAAAAAAGAAGAAATC
CAAGTAGGAATCGACATAACCAGCACAACGGAACACCTCCGCTCCCCGCG
AAACCCGTCCCCTCCCACCCGGACAGCCTTCCTGGAATACGTCTCCATCT
TCACGGAGATATTCTCGGCGAGGGAACTATCTTTGATTAAATCGCTCACG
CATCCTGTGTATCATTATCCGGTGTCGTCGACGGAGGGGGTGGTGTATAG
TTATCGGGTGTTTTTTGCGTACTGGGCGCTTAAGGAGGCGTATATTAAGA
TGACGGGGGAGGCGTTGTTGGCGGAGTGGTTGAGGGAATTGGAGTTTTTG
GATGTGAGGGTCCCGGATAAGGATGGGGAGGTGTATAGGGGGGTCAGGGT
GGAGATGAACGGGAGGGAGGTCGGGGATGTTAGGGTTGAGGTGCAGGCGT
TTGAAGGGGGGTATTTGGTTGCTACGGCGGCCAGAGGGGGAGGTGTTGGG
AGGATAGAGGGAGAAGGGAAAGATGTGTGGGAGGGATTGAGGAGGTTGGA
TGTTGAGGGGGATGTTAGGGATTGTGCGGAGGGGAGGTGTGCTTGTTTGG
AGTGA back to topCoding sequence (CDS) from alignment at ch3:2520157..2521361- >KJC3_003649-T1 ID=KJC3_003649-T1|Name=KJC3_003649-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at ch3:2520157..2521361- (Aspergillus niger KJC3)
ATGTCTACCTCATCCGACCCCAAACCCACCCTAGTCCGGTGGTACATCGA
CACCCGCCCCCTAACCGCCACCTCCAACGCCCTCCCCCTCCTCGACACCC
TCCAACCCACCGAACAACAAGCCATCCAGAAATACTATCACCTGAAGGAC
AGACACATGTCCCTCGCCTCCAACCTCCTCAAATACCTCTTCATCCACCG
CACCTGCCGCATCCCCTGGTCCCAAATCACCATCAGCCGGACCCCAGCCC
CGCACCATCGACCCTGCTTCATCCCATCCGCAGCAGTCCTCTCCGCCTCC
AGCTCCTCAATCCCAACGGTCGAATTCAACGTCAGCCACCAGGACTCAAT
GGTCGCCTTAGCCGGCACTACCATCCCACCCAATGCCAAAAAAGAAGAAA
TCCAAGTAGGAATCGACATAACCAGCACAACGGAACACCTCCGCTCCCCG
CGAAACCCGTCCCCTCCCACCCGGACAGCCTTCCTGGAATACGTCTCCAT
CTTCACGGAGATATTCTCGGCGAGGGAACTATCTTTGATTAAATCGCTCA
CGCATCCTGTGTATCATTATCCGGTGTCGTCGACGGAGGGGGTGGTGTAT
AGTTATCGGGTGTTTTTTGCGTACTGGGCGCTTAAGGAGGCGTATATTAA
GATGACGGGGGAGGCGTTGTTGGCGGAGTGGTTGAGGGAATTGGAGTTTT
TGGATGTGAGGGTCCCGGATAAGGATGGGGAGGTGTATAGGGGGGTCAGG
GTGGAGATGAACGGGAGGGAGGTCGGGGATGTTAGGGTTGAGGTGCAGGC
GTTTGAAGGGGGGTATTTGGTTGCTACGGCGGCCAGAGGGGGAGGTGTTG
GGAGGATAGAGGGAGAAGGGAAAGATGTGTGGGAGGGATTGAGGAGGTTG
GATGTTGAGGGGGATGTTAGGGATTGTGCGGAGGGGAGGTGTGCTTGTTT
GGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008897 | holo-[acyl-carrier-protein] synthase activity |
| GO:0000287 | magnesium ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003649-T1.utr5p1 | KJC3_003649-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037143 |
| DBxref | InterPro:IPR008278 |
| DBxref | PFAM:PF01648 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2520157..2521361 - |
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