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KJC3_003655-T1, KJC3_003655-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003655-T1
Unique NameKJC3_003655-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2530823..2531765+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003655-T1 ID=KJC3_003655-T1|Name=KJC3_003655-T1|organism=Aspergillus niger KJC3|type=mRNA|length=943bp|location=Sequence derived from alignment at ch3:2530823..2531765+ (Aspergillus niger KJC3)
CCATCTCGCTATTCCCATCAGCCACTCTTCGCGTCTTTCGTTTCTATCTG
TTCCAAGTTGAAGCTTTCGAGCGGATATAACACACTCGCTACATATTAAT
ACGCGTGAACCTATTTCTTTTCGGCACACTTCATCAGTAATACACCTTCG
ACCTCCGACCTCCGAAAATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGC
GATAGCAAGCCCACCGATCAAATTCACTTCCGATTCTGTCGTGAATGGTA
AGTTTTGATCTCTACACTTTGGTCGGACCTTCTGCTAACGTCTACAGTTC
CAACTTGCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTGATGTTCA
CCTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTGCGTCTAT
CAAAACAAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGACCCAGGA
TGTGGGATCTGATCCTACGGTTTGTCTCCCGGGTTTCTGTGATCATTGTG
GGGAAGAGATTACCTGCTTCGTCTGTGACATATCCTCCGAGGACTCCTGG
TCCGAAGAGGATTATGATGGCTTTTCGTCGTCATGAGGTCCTGCGAGCGC
CGCGCTCGCGTCATGGATACATTCCAAGTTGTCTTGAAATTTCCGTGGCT
AACCCACTCTTTCCCTAGCTTCCTCGTTCCAACAAGCTCTGCCCGAGCTG
CGGCGAAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAA
CGGGAATGGTAAGCCTTCATGCCGGTTTACACCGCATCCATGAAGGGATC
GGCTGACGCTTACTTTCCAGAAACTTTACTACGTCTGTTGCGCGTGCGGC
AATGTTTTCGTCTAATTCTCGATTTGCCATACTACATGTCATGTACCTGA
TACCCGATCTTGGTTTTTGTTCCGTTAAGCAGCATTTTTGTGG
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Coding sequence (CDS) from alignment at ch3:2530823..2531765+

>KJC3_003655-T1 ID=KJC3_003655-T1|Name=KJC3_003655-T1|organism=Aspergillus niger KJC3|type=CDS|length=1548bp|location=Sequence derived from alignment at ch3:2530823..2531765+ (Aspergillus niger KJC3)
ATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGCGATAGCAAGCCCACCGA
TCAAATTCACTTCCGATTCTGTCGTGAATGTTCCAACTTGCTCTACCCGA
AGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCCGAACCTGCCAT
GTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAACAAACTCAACAC
TCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGGATCTGATCCTA
CGCTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCA
GTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGAAACTTTA
CTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAAATGTCTGCCAGCC
CATCCCCCTCTGCCGGTGGCGATAGCAAGCCCACCGATCAAATTCACTTC
CGATTCTGTCGTGAATGTTCCAACTTGCTCTACCCGAAGGAAGACCGCAT
CAACAACCGGTTGATGTTCACCTGCCGAACCTGCCATGTCGGCGAGCCCG
CCACCTCCTACTGCGTCTATCAAAACAAACTCAACACTCAAGTCGGAGAT
ACCGCCGGTGTGACCCAGGATGTGGGATCTGATCCTACGCTTCCTCGTTC
CAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCAGTCTTCTTCCAGT
CGCAACAGCGTTCCGCTGAAACGGGAATGAAACTTTACTACGTCTGTTGC
GCGTGCGGCAATGTTTTCGTCTAAATGTCTGCCAGCCCATCCCCCTCTGC
CGGTGGCGATAGCAAGCCCACCGATCAAATTCACTTCCGATTCTGTCGTG
AATGTTCCAACTTGCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTG
ATGTTCACCTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTG
CGTCTATCAAAACAAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGA
CCCAGGATGTGGGATCTGATCCTACGCTTCCTCGTTCCAACAAGCTCTGC
CCGAGCTGCGGCGAAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTC
CGCTGAAACGGGAATGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATG
TTTTCGTCTAAATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGCGATAGC
AAGCCCACCGATCAAATTCACTTCCGATTCTGTCGTGAATGTTCCAACTT
GCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCC
GAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAAC
AAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGG
ATCTGATCCTACGCTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCG
AAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGA
ATGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006379mRNA cleavage
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003655KJC3_003655Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003655-T1KJC3_003655-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003655-T1.utr5p1KJC3_003655-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003655-T1.exon1KJC3_003655-T1.exon1Aspergillus niger KJC3exon
KJC3_003655-T1.exon2KJC3_003655-T1.exon2Aspergillus niger KJC3exon
KJC3_003655-T1.exon3KJC3_003655-T1.exon3Aspergillus niger KJC3exon
KJC3_003655-T1.exon4KJC3_003655-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003655-T1.cdsKJC3_003655-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003655-T1.utr3p1KJC3_003655-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092654O3
DBxrefInterPro:IPR034012
DBxrefInterPro:IPR012164
DBxrefInterPro:IPR001222
DBxrefInterPro:IPR001529
DBxrefPFAM:PF01096
DBxrefPFAM:PF02150
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2530823..2531765 +
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