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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2577729..2579201- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003671-T1 ID=KJC3_003671-T1|Name=KJC3_003671-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1473bp|location=Sequence derived from alignment at ch3:2577729..2579201- (Aspergillus niger KJC3)
CATCTGACGGCCCGCAGTGCAAGTCCCGACTAAACTCCGGATTCACCCCC
GCCTTGATAACGCAACAAAGGAATTACTGTCCGGCTGTCCCGTTCGAAAG
ACAACCATGGATCTGCAAGAGAATCGAGAACGCATGCGCCGCGGCGAGCT
CTACCATGCCTTCGTCTCCGATCTCACAGCTGATCGAGCGCGTTGCGCCA
GTGCCTGTCGCCGCTTCAACAATGCAGGTGACGTGTCTCGTCGACAGTCC
CTCGAGTTGTGGAAAGAGTAAGTGAACATAATCGAGTATATGCTCCCCAC
GCCGGAATACAAGCACGGCAGGCTCCACACGGATGGAACAGTCGTCCACG
GCATGGCGGATACAGCCGGGCTGACAGGAACAGCATTGTGGGTGATACCA
CCCCTCTCCCGCCTCCCAGTCAGGATCCCGCCGAGGATGATAAGCTCTTA
GCGAAGCATCCTTGGATCGAGCCTCCCATTCGCATGGACTACGGGTACAA
TGTGAAGGTGGGAGAAGGCGCCTTCATCAATTTCGACTGTGTTATTATCG
ACACCTGCTTGGTGACCATTGGGGCGCGCACCTTGTTCGGTCCCAAGGTC
AGTCTTTATAGTGGCACGCACCCTCTTGATCCGGCCGTGCGCAATGGAAC
GGAAGGTCCAGAATCAGGCAAAGAAATACATATTGGTGAGGATTGCTGGC
TCGCAGGGAATGTGACTGTGTTGCCGGGAGTGACGATCGGAAAAGGTGCG
GTTATTGGGGCTGGAAGTGTGGTGACCAAGGTGAGTTCGAGACAGCTTAC
CATTCCTGGTATTTTGTGTGAGGGTCGAATATGGTCTTTGCTGATAACGA
TGATTGCTATGTCAGGATGTTCCCGCATTTCATTTGGCTGTGGGAAACCC
AGCGAGAGTGATTCGCAAGATTGAGACCTCAATGAAGGAGTAATTGGATC
TTGTTAGTTGCTTATGCTCTCCCAGCGATGCATCTAAAATAGGGTTGGGT
CGGTCGTGGTTAATTTTGCACTTGAACACTGAAATTACCCAACGATCGTA
CATAAATAGATTTATCATAAACAGGGATCTGCCGACTCGGCACAAGTCAC
ACAAACATTCTTCTCTACGTCCCCGACGCGCAGGGTTGGGGTGTTAATTC
ACCATGATCGACAGCACAGTGGGGACGGAGAAAAAAGGGCCCTGGAAACA
GGCAGAATGGGCTGCTGACACTTGACAACGGTGCCCGAGTCGGAACGCAC
TAATTAGCAATAATGGGTTGGTTGATTTGCTGGGCGTGATGGGAGATAAC
CCCACGCTAGGAAATGAGCTGGAAAGCTTCAAGTGGAGATGGGGGGCAAT
TAAGCTCCAGGGCAAGAGAGGGGCTCTAGCTGGGTTTGGAGTAGGCAGAT
GGAGGCAGATGGAGGTTGGCTCGCCTAAGCGGCGGGGAGGAATGCGATCA
CGATGTGCCCCTGCAGCTCCCCT back to topCoding sequence (CDS) from alignment at ch3:2577729..2579201- >KJC3_003671-T1 ID=KJC3_003671-T1|Name=KJC3_003671-T1|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch3:2577729..2579201- (Aspergillus niger KJC3)
GATGTTCCCGCATTTCATTTGGCTGTGGGAAACCCAGCGAGAGTGATTCG
CAAGATTGAGACCTCAATGAAGGAGTAACATTGTGGGTGATACCACCCCT
CTCCCGCCTCCCAGTCAGGATCCCGCCGAGGATGATAAGCTCTTAGCGAA
GCATCCTTGGATCGAGCCTCCCATTCGCATGGACTACGGGTACAATGTGA
AGGTGGGAGAAGGCGCCTTCATCAATTTCGACTGTGTTATTATCGACACC
TGCTTGGTGACCATTGGGGCGCGCACCTTGTTCGGTCCCAAGGTCAGTCT
TTATAGTGGCACGCACCCTCTTGATCCGGCCGTGCGCAATGGAACGGAAG
GTCCAGAATCAGGCAAAGAAATACATATTGGTGAGGATTGCTGGCTCGCA
GGGAATGTGACTGTGTTGCCGGGAGTGACGATCGGAAAAGGTGCGGTTAT
TGGGGCTGGAAGTGTGGTGACCAAGATGGATCTGCAAGAGAATCGAGAAC
GCATGCGCCGCGGCGAGCTCTACCATGCCTTCGTCTCCGATCTCACAGCT
GATCGAGCGCGTTGCGCCAGTGCCTGTCGCCGCTTCAACAATGCAGGTGA
CGTGTCTCGTCGACAGTCCCTCGAGTTGTGGAAAGAGATGTTCCCGCATT
TCATTTGGCTGTGGGAAACCCAGCGAGAGTGATTCGCAAGATTGAGACCT
CAATGAAGGAGTAACATTGTGGGTGATACCACCCCTCTCCCGCCTCCCAG
TCAGGATCCCGCCGAGGATGATAAGCTCTTAGCGAAGCATCCTTGGATCG
AGCCTCCCATTCGCATGGACTACGGGTACAATGTGAAGGTGGGAGAAGGC
GCCTTCATCAATTTCGACTGTGTTATTATCGACACCTGCTTGGTGACCAT
TGGGGCGCGCACCTTGTTCGGTCCCAAGGTCAGTCTTTATAGTGGCACGC
ACCCTCTTGATCCGGCCGTGCGCAATGGAACGGAAGGTCCAGAATCAGGC
AAAGAAATACATATTGGTGAGGATTGCTGGCTCGCAGGGAATGTGACTGT
GTTGCCGGGAGTGACGATCGGAAAAGGTGCGGTTATTGGGGCTGGAAGTG
TGGTGACCAAGATGGATCTGCAAGAGAATCGAGAACGCATGCGCCGCGGC
GAGCTCTACCATGCCTTCGTCTCCGATCTCACAGCTGATCGAGCGCGTTG
CGCCAGTGCCTGTCGCCGCTTCAACAATGCAGGTGACGTGTCTCGTCGAC
AGTCCCTCGAGTTGTGGAAAGAGATGTTCCCGCATTTCATTTGGCTGTGG
GAAACCCAGCGAGAGTGATTCGCAAGATTGAGACCTCAATGAAGGAGTAA
CATTGTGGGTGATACCACCCCTCTCCCGCCTCCCAGTCAGGATCCCGCCG
AGGATGATAAGCTCTTAGCGAAGCATCCTTGGATCGAGCCTCCCATTCGC
ATGGACTACGGGTACAATGTGAAGGTGGGAGAAGGCGCCTTCATCAATTT
CGACTGTGTTATTATCGACACCTGCTTGGTGACCATTGGGGCGCGCACCT
TGTTCGGTCCCAAGGTCAGTCTTTATAGTGGCACGCACCCTCTTGATCCG
GCCGTGCGCAATGGAACGGAAGGTCCAGAATCAGGCAAAGAAATACATAT
TGGTGAGGATTGCTGGCTCGCAGGGAATGTGACTGTGTTGCCGGGAGTGA
CGATCGGAAAAGGTGCGGTTATTGGGGCTGGAAGTGTGGTGACCAAGATG
GATCTGCAAGAGAATCGAGAACGCATGCGCCGCGGCGAGCTCTACCATGC
CTTCGTCTCCGATCTCACAGCTGATCGAGCGCGTTGCGCCAGTGCCTGTC
GCCGCTTCAACAATGCAGGTGACGTGTCTCGTCGACAGTCCCTCGAGTTG
TGGAAAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016740 | transferase activity |
| GO:0016407 | acetyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003671-T1.utr3p1 | KJC3_003671-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003671-T1.utr5p1 | KJC3_003671-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011004 |
| DBxref | InterPro:IPR018357 |
| DBxref | InterPro:IPR001451 |
| DBxref | InterPro:IPR024688 |
| DBxref | PFAM:PF12464 |
| DBxref | PFAM:PF14602 |
| DBxref | PFAM:PF00132 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2577729..2579201 - |
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