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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2580945..2583235- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003673-T1 ID=KJC3_003673-T1|Name=KJC3_003673-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2291bp|location=Sequence derived from alignment at ch3:2580945..2583235- (Aspergillus niger KJC3)
CTGTCAGTCTCACTTGGGTTGTGTCTAATGTCCACTTTCGTGGTTGCACC
ATTGACGCCCATTTGACATTATGGCGACTGAACGCTCTTTGGGCGCTCTT
CTGAGATCGCTTCAATACTCATCTGACCTTCAGGATGTCTTCACGTATGA
TAGCCTCCCCCTCTCCGCTTCTCGGCTGCGCGGACGCAACTGACCGACTT
CGCTAGTTTGCTTCCCACGGCGACAAGCCTTTTGACCGTTCTTGGAAATC
CTCTGAATATTACTCTGCTCGCATCGCAGCTGCTAGCAACCCCAGCAATT
TGGGACCGCCCTGTCGATCTTCTCACGTGTCGCAAGATCCTCAGCATATT
CAACACAGCCGCCATCGCGATAGTACAAAGCGAAGCTTCTGACGATTCGA
GGACACCCTACACAAAGGCTAGGAAGATTGAACGTGAGGACTGGGTTAAA
GCTGTTGTCAATGGAGCGGATGATAAGTCGCCGCGATGGAGACACACAAT
CTTGATTGGGGGGTTACTGCTGGGATTCGAGGGACAGAACAGACAGGGGT
TGCCGTGGCACGTCCGGCGTAAGTTGGAAAGGGCGCTTGTGACGGCTGCA
CAGCTTGCGCTCGAGGAGCTGGATCCCCGGAATGAGATTGACGGTCGTTG
TGTCACCATGGTTCTGAACTACTCCTTTGAACTGCTATCGGACTCCGAAA
GGAGCAAGCTTGACTACGACATCTTGCTACCCGTCATGGTCAATGCCACC
TATGCATCACCTGAAGGCTTGGAGGGAGGATACTTCCTAGGTACTGTGGA
CAAAGACATTGTGGAAGCCCCTGGCAAGCAATTCCAGTGGTTGGCACAGT
CTGACACGTTTGCTCGTGTGACGGCGATCTCATCTAGTCCTCTCGTGTCT
GCCCTAGGGCCTCTGTCCCGGCTCATGGCGCATGCCATTGAAAACGCAAA
AGACCCTGGTCTGGTTGCTCAGACTTTGGACCACATCACGGACTTTGTGC
GTACACTTATGGTGCAGTGGCGGCTCAACAAGTTATCGGAGGTCGACAAA
TCTGAGGAAGCTGAGTTCCTTGACGCCGAGTCGTTGAGGACCACCATCCC
AGGACTTTGGAGACTGCTTCGTAATTGCTTATATTCCATTGTCATTGTTC
TCCGGGCTGTCCTGGGAAGAGTGATCAACGACCCTGTATTGGCTGCTCAC
CGCAGTGCTCCGTTCATATCCATGCAGGTTCTCCATATTCTGCGGAATCT
CTATTTCATATCATCCCGCATGGGCCAGAACGCTTCTTCGCAGCACATGT
TCGTGACCTTAACAGCCGTGGATATCCTCTCACATTATCCCGATCTAGCC
GAGAATTTTCTGAGAAGCATCAAGCCCAGTGAGCTCGGCCAGATCCCCGA
CCATCCTATCGAGCGATGCCTGGACCTGTTCTTCCTCAACACGTCGGAGC
TTTTTACACCCTTGCTATCACCCGCATGCAGCGAAGAGCTTCTCGTTGCA
GCAGCCGTTCCTTACCTTCCAGCAGGCGGAAATAACCATCTCCTCGAGAT
CTTCGAAGCCGCCCACAGCACGGTCCTAGCCGTATTCGCCATCCCGAACA
ACGCCGCCGTAGCAGCCAAACATCTCCCATTCTACATCGACAACCTATTT
GCTGTAAGCTACCTTCTCACCATCCCTAGAGTTCCCCAGCTAATAATCCT
TTCCAGGTATTCCCCGAAAACCTCTCAGCCCGTCAATTCCGACTAGCCTT
TAAAACCGTCATCCAAGTCACGGCACCCCCCTCCCCAATCGCCAACACCC
AGCGTCTCCTCCCATCCACCCTCCTCGAAGTTCTCTACGACCGAGCACTC
CACGCATCCGACCAACTACTCCCCGAACCAACATCGACGCAACTCGAGGG
CCCCGACCTCGGCAAATCCCCGCCCGTGTCGGAACAAGCAGCCCTGACCC
TCGCGCTTATTGACAGTCTCTGTTTCTTGCGCGTCGAAGACCTTGAGGAG
TGGCTTCCTCTCACGGCGCACTTGCTCAACACCATCAAGACCCCGGATAT
GCATAAGCAATGCGTGGAACGGTTCTGGGAGGCGCTGAGTAGCGGCGAGA
TGGATGTTGAACGGGCGCATTTCTGCGTCACGTGGTGGAGTACGCGTGGT
GGGAGGGAGCTCGTTCTTTATGGGGATGACTTCGGGGCCGATGCGGAACA
TAGGCATGATGAGGCTGAGGGACAGGGACAGGAACAGGGGGCGTATATGA
GTGGTGCTCTTGGTGCGGTGGCGAGGGAGAGTAAGCTTTAG back to topCoding sequence (CDS) from alignment at ch3:2580945..2583235- >KJC3_003673-T1 ID=KJC3_003673-T1|Name=KJC3_003673-T1|organism=Aspergillus niger KJC3|type=CDS|length=6318bp|location=Sequence derived from alignment at ch3:2580945..2583235- (Aspergillus niger KJC3)
GTATTCCCCGAAAACCTCTCAGCCCGTCAATTCCGACTAGCCTTTAAAAC
CGTCATCCAAGTCACGGCACCCCCCTCCCCAATCGCCAACACCCAGCGTC
TCCTCCCATCCACCCTCCTCGAAGTTCTCTACGACCGAGCACTCCACGCA
TCCGACCAACTACTCCCCGAACCAACATCGACGCAACTCGAGGGCCCCGA
CCTCGGCAAATCCCCGCCCGTGTCGGAACAAGCAGCCCTGACCCTCGCGC
TTATTGACAGTCTCTGTTTCTTGCGCGTCGAAGACCTTGAGGAGTGGCTT
CCTCTCACGGCGCACTTGCTCAACACCATCAAGACCCCGGATATGCATAA
GCAATGCGTGGAACGGTTCTGGGAGGCGCTGAGTAGCGGCGAGATGGATG
TTGAACGGGCGCATTTCTGCGTCACGTGGTGGAGTACGCGTGGTGGGAGG
GAGCTCGTTCTTTATGGGGATGACTTCGGGGCCGATGCGGAACATAGGCA
TGATGAGGCTGAGGGACAGGGACAGGAACAGGGGGCGTATATGAGTGGTG
CTCTTGGTGCGGTGGCGAGGGAGAGTAAGCTTTAGTTTGCTTCCCACGGC
GACAAGCCTTTTGACCGTTCTTGGAAATCCTCTGAATATTACTCTGCTCG
CATCGCAGCTGCTAGCAACCCCAGCAATTTGGGACCGCCCTGTCGATCTT
CTCACGTGTCGCAAGATCCTCAGCATATTCAACACAGCCGCCATCGCGAT
AGTACAAAGCGAAGCTTCTGACGATTCGAGGACACCCTACACAAAGGCTA
GGAAGATTGAACGTGAGGACTGGGTTAAAGCTGTTGTCAATGGAGCGGAT
GATAAGTCGCCGCGATGGAGACACACAATCTTGATTGGGGGGTTACTGCT
GGGATTCGAGGGACAGAACAGACAGGGGTTGCCGTGGCACGTCCGGCGTA
AGTTGGAAAGGGCGCTTGTGACGGCTGCACAGCTTGCGCTCGAGGAGCTG
GATCCCCGGAATGAGATTGACGGTCGTTGTGTCACCATGGTTCTGAACTA
CTCCTTTGAACTGCTATCGGACTCCGAAAGGAGCAAGCTTGACTACGACA
TCTTGCTACCCGTCATGGTCAATGCCACCTATGCATCACCTGAAGGCTTG
GAGGGAGGATACTTCCTAGGTACTGTGGACAAAGACATTGTGGAAGCCCC
TGGCAAGCAATTCCAGTGGTTGGCACAGTCTGACACGTTTGCTCGTGTGA
CGGCGATCTCATCTAGTCCTCTCGTGTCTGCCCTAGGGCCTCTGTCCCGG
CTCATGGCGCATGCCATTGAAAACGCAAAAGACCCTGGTCTGGTTGCTCA
GACTTTGGACCACATCACGGACTTTGTGCGTACACTTATGGTGCAGTGGC
GGCTCAACAAGTTATCGGAGGTCGACAAATCTGAGGAAGCTGAGTTCCTT
GACGCCGAGTCGTTGAGGACCACCATCCCAGGACTTTGGAGACTGCTTCG
TAATTGCTTATATTCCATTGTCATTGTTCTCCGGGCTGTCCTGGGAAGAG
TGATCAACGACCCTGTATTGGCTGCTCACCGCAGTGCTCCGTTCATATCC
ATGCAGGTTCTCCATATTCTGCGGAATCTCTATTTCATATCATCCCGCAT
GGGCCAGAACGCTTCTTCGCAGCACATGTTCGTGACCTTAACAGCCGTGG
ATATCCTCTCACATTATCCCGATCTAGCCGAGAATTTTCTGAGAAGCATC
AAGCCCAGTGAGCTCGGCCAGATCCCCGACCATCCTATCGAGCGATGCCT
GGACCTGTTCTTCCTCAACACGTCGGAGCTTTTTACACCCTTGCTATCAC
CCGCATGCAGCGAAGAGCTTCTCGTTGCAGCAGCCGTTCCTTACCTTCCA
GCAGGCGGAAATAACCATCTCCTCGAGATCTTCGAAGCCGCCCACAGCAC
GGTCCTAGCCGTATTCGCCATCCCGAACAACGCCGCCGTAGCAGCCAAAC
ATCTCCCATTCTACATCGACAACCTATTTGCTATGGCGACTGAACGCTCT
TTGGGCGCTCTTCTGAGATCGCTTCAATACTCATCTGACCTTCAGGATGT
CTTCACGTATTCCCCGAAAACCTCTCAGCCCGTCAATTCCGACTAGCCTT
TAAAACCGTCATCCAAGTCACGGCACCCCCCTCCCCAATCGCCAACACCC
AGCGTCTCCTCCCATCCACCCTCCTCGAAGTTCTCTACGACCGAGCACTC
CACGCATCCGACCAACTACTCCCCGAACCAACATCGACGCAACTCGAGGG
CCCCGACCTCGGCAAATCCCCGCCCGTGTCGGAACAAGCAGCCCTGACCC
TCGCGCTTATTGACAGTCTCTGTTTCTTGCGCGTCGAAGACCTTGAGGAG
TGGCTTCCTCTCACGGCGCACTTGCTCAACACCATCAAGACCCCGGATAT
GCATAAGCAATGCGTGGAACGGTTCTGGGAGGCGCTGAGTAGCGGCGAGA
TGGATGTTGAACGGGCGCATTTCTGCGTCACGTGGTGGAGTACGCGTGGT
GGGAGGGAGCTCGTTCTTTATGGGGATGACTTCGGGGCCGATGCGGAACA
TAGGCATGATGAGGCTGAGGGACAGGGACAGGAACAGGGGGCGTATATGA
GTGGTGCTCTTGGTGCGGTGGCGAGGGAGAGTAAGCTTTAGTTTGCTTCC
CACGGCGACAAGCCTTTTGACCGTTCTTGGAAATCCTCTGAATATTACTC
TGCTCGCATCGCAGCTGCTAGCAACCCCAGCAATTTGGGACCGCCCTGTC
GATCTTCTCACGTGTCGCAAGATCCTCAGCATATTCAACACAGCCGCCAT
CGCGATAGTACAAAGCGAAGCTTCTGACGATTCGAGGACACCCTACACAA
AGGCTAGGAAGATTGAACGTGAGGACTGGGTTAAAGCTGTTGTCAATGGA
GCGGATGATAAGTCGCCGCGATGGAGACACACAATCTTGATTGGGGGGTT
ACTGCTGGGATTCGAGGGACAGAACAGACAGGGGTTGCCGTGGCACGTCC
GGCGTAAGTTGGAAAGGGCGCTTGTGACGGCTGCACAGCTTGCGCTCGAG
GAGCTGGATCCCCGGAATGAGATTGACGGTCGTTGTGTCACCATGGTTCT
GAACTACTCCTTTGAACTGCTATCGGACTCCGAAAGGAGCAAGCTTGACT
ACGACATCTTGCTACCCGTCATGGTCAATGCCACCTATGCATCACCTGAA
GGCTTGGAGGGAGGATACTTCCTAGGTACTGTGGACAAAGACATTGTGGA
AGCCCCTGGCAAGCAATTCCAGTGGTTGGCACAGTCTGACACGTTTGCTC
GTGTGACGGCGATCTCATCTAGTCCTCTCGTGTCTGCCCTAGGGCCTCTG
TCCCGGCTCATGGCGCATGCCATTGAAAACGCAAAAGACCCTGGTCTGGT
TGCTCAGACTTTGGACCACATCACGGACTTTGTGCGTACACTTATGGTGC
AGTGGCGGCTCAACAAGTTATCGGAGGTCGACAAATCTGAGGAAGCTGAG
TTCCTTGACGCCGAGTCGTTGAGGACCACCATCCCAGGACTTTGGAGACT
GCTTCGTAATTGCTTATATTCCATTGTCATTGTTCTCCGGGCTGTCCTGG
GAAGAGTGATCAACGACCCTGTATTGGCTGCTCACCGCAGTGCTCCGTTC
ATATCCATGCAGGTTCTCCATATTCTGCGGAATCTCTATTTCATATCATC
CCGCATGGGCCAGAACGCTTCTTCGCAGCACATGTTCGTGACCTTAACAG
CCGTGGATATCCTCTCACATTATCCCGATCTAGCCGAGAATTTTCTGAGA
AGCATCAAGCCCAGTGAGCTCGGCCAGATCCCCGACCATCCTATCGAGCG
ATGCCTGGACCTGTTCTTCCTCAACACGTCGGAGCTTTTTACACCCTTGC
TATCACCCGCATGCAGCGAAGAGCTTCTCGTTGCAGCAGCCGTTCCTTAC
CTTCCAGCAGGCGGAAATAACCATCTCCTCGAGATCTTCGAAGCCGCCCA
CAGCACGGTCCTAGCCGTATTCGCCATCCCGAACAACGCCGCCGTAGCAG
CCAAACATCTCCCATTCTACATCGACAACCTATTTGCTATGGCGACTGAA
CGCTCTTTGGGCGCTCTTCTGAGATCGCTTCAATACTCATCTGACCTTCA
GGATGTCTTCACGTATTCCCCGAAAACCTCTCAGCCCGTCAATTCCGACT
AGCCTTTAAAACCGTCATCCAAGTCACGGCACCCCCCTCCCCAATCGCCA
ACACCCAGCGTCTCCTCCCATCCACCCTCCTCGAAGTTCTCTACGACCGA
GCACTCCACGCATCCGACCAACTACTCCCCGAACCAACATCGACGCAACT
CGAGGGCCCCGACCTCGGCAAATCCCCGCCCGTGTCGGAACAAGCAGCCC
TGACCCTCGCGCTTATTGACAGTCTCTGTTTCTTGCGCGTCGAAGACCTT
GAGGAGTGGCTTCCTCTCACGGCGCACTTGCTCAACACCATCAAGACCCC
GGATATGCATAAGCAATGCGTGGAACGGTTCTGGGAGGCGCTGAGTAGCG
GCGAGATGGATGTTGAACGGGCGCATTTCTGCGTCACGTGGTGGAGTACG
CGTGGTGGGAGGGAGCTCGTTCTTTATGGGGATGACTTCGGGGCCGATGC
GGAACATAGGCATGATGAGGCTGAGGGACAGGGACAGGAACAGGGGGCGT
ATATGAGTGGTGCTCTTGGTGCGGTGGCGAGGGAGAGTAAGCTTTAGTTT
GCTTCCCACGGCGACAAGCCTTTTGACCGTTCTTGGAAATCCTCTGAATA
TTACTCTGCTCGCATCGCAGCTGCTAGCAACCCCAGCAATTTGGGACCGC
CCTGTCGATCTTCTCACGTGTCGCAAGATCCTCAGCATATTCAACACAGC
CGCCATCGCGATAGTACAAAGCGAAGCTTCTGACGATTCGAGGACACCCT
ACACAAAGGCTAGGAAGATTGAACGTGAGGACTGGGTTAAAGCTGTTGTC
AATGGAGCGGATGATAAGTCGCCGCGATGGAGACACACAATCTTGATTGG
GGGGTTACTGCTGGGATTCGAGGGACAGAACAGACAGGGGTTGCCGTGGC
ACGTCCGGCGTAAGTTGGAAAGGGCGCTTGTGACGGCTGCACAGCTTGCG
CTCGAGGAGCTGGATCCCCGGAATGAGATTGACGGTCGTTGTGTCACCAT
GGTTCTGAACTACTCCTTTGAACTGCTATCGGACTCCGAAAGGAGCAAGC
TTGACTACGACATCTTGCTACCCGTCATGGTCAATGCCACCTATGCATCA
CCTGAAGGCTTGGAGGGAGGATACTTCCTAGGTACTGTGGACAAAGACAT
TGTGGAAGCCCCTGGCAAGCAATTCCAGTGGTTGGCACAGTCTGACACGT
TTGCTCGTGTGACGGCGATCTCATCTAGTCCTCTCGTGTCTGCCCTAGGG
CCTCTGTCCCGGCTCATGGCGCATGCCATTGAAAACGCAAAAGACCCTGG
TCTGGTTGCTCAGACTTTGGACCACATCACGGACTTTGTGCGTACACTTA
TGGTGCAGTGGCGGCTCAACAAGTTATCGGAGGTCGACAAATCTGAGGAA
GCTGAGTTCCTTGACGCCGAGTCGTTGAGGACCACCATCCCAGGACTTTG
GAGACTGCTTCGTAATTGCTTATATTCCATTGTCATTGTTCTCCGGGCTG
TCCTGGGAAGAGTGATCAACGACCCTGTATTGGCTGCTCACCGCAGTGCT
CCGTTCATATCCATGCAGGTTCTCCATATTCTGCGGAATCTCTATTTCAT
ATCATCCCGCATGGGCCAGAACGCTTCTTCGCAGCACATGTTCGTGACCT
TAACAGCCGTGGATATCCTCTCACATTATCCCGATCTAGCCGAGAATTTT
CTGAGAAGCATCAAGCCCAGTGAGCTCGGCCAGATCCCCGACCATCCTAT
CGAGCGATGCCTGGACCTGTTCTTCCTCAACACGTCGGAGCTTTTTACAC
CCTTGCTATCACCCGCATGCAGCGAAGAGCTTCTCGTTGCAGCAGCCGTT
CCTTACCTTCCAGCAGGCGGAAATAACCATCTCCTCGAGATCTTCGAAGC
CGCCCACAGCACGGTCCTAGCCGTATTCGCCATCCCGAACAACGCCGCCG
TAGCAGCCAAACATCTCCCATTCTACATCGACAACCTATTTGCTATGGCG
ACTGAACGCTCTTTGGGCGCTCTTCTGAGATCGCTTCAATACTCATCTGA
CCTTCAGGATGTCTTCAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003673-T1.utr5p1 | KJC3_003673-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR030476 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2580945..2583235 - |
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