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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2580945..2583235- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003673-T2 ID=KJC3_003673-T2|Name=KJC3_003673-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2291bp|location=Sequence derived from alignment at ch3:2580945..2583235- (Aspergillus niger KJC3)
CTGTCAGTCTCACTTGGGTTGTGTCTAATGTCCACTTTCGTGGTTGCACC
ATTGACGCCCATTTGACATTATGGCGACTGAACGCTCTTTGGGCGCTCTT
CTGAGATCGCTTCAATACTCATCTGACCTTCAGGATGTCTTCACGTATGA
TAGCCTCCCCCTCTCCGCTTCTCGGCTGCGCGGACGCAACTGACCGACTT
CGCTAGTTTGCTTCCCACGGCGACAAGCCTTTTGACCGTTCTTGGAAATC
CTCTGAATATTACTCTGCTCGCATCGCAGCTGCTAGCAACCCCAGCAATT
TGGGACCGCCCTGTCGATCTTCTCACGTGTCGCAAGATCCTCAGCATATT
CAACACAGCCGCCATCGCGATAGTACAAAGCGAAGCTTCTGACGATTCGA
GGACACCCTACACAAAGGCTAGGAAGATTGAACGTGAGGACTGGGTTAAA
GCTGTTGTCAATGGAGCGGATGATAAGTCGCCGCGATGGAGACACACAAT
CTTGATTGGGGGGTTACTGCTGGGATTCGAGGGACAGAACAGACAGGGGT
TGCCGTGGCACGTCCGGCGTAAGTTGGAAAGGGCGCTTGTGACGGCTGCA
CAGCTTGCGCTCGAGGAGCTGGATCCCCGGAATGAGATTGACGGTCGTTG
TGTCACCATGGTTCTGAACTACTCCTTTGAACTGCTATCGGACTCCGAAA
GGAGCAAGCTTGACTACGACATCTTGCTACCCGTCATGGTCAATGCCACC
TATGCATCACCTGAAGGCTTGGAGGGAGGATACTTCCTAGGTACTGTGGA
CAAAGACATTGTGGAAGCCCCTGGCAAGCAATTCCAGTGGTTGGCACAGT
CTGACACGTTTGCTCGTGTGACGGCGATCTCATCTAGTCCTCTCGTGTCT
GCCCTAGGGCCTCTGTCCCGGCTCATGGCGCATGCCATTGAAAACGCAAA
AGACCCTGGTCTGGTTGCTCAGACTTTGGACCACATCACGGACTTTGTGC
GTACACTTATGGTGCAGTGGCGGCTCAACAAGTTATCGGAGGTCGACAAA
TCTGAGGAAGCTGAGTTCCTTGACGCCGAGTCGTTGAGGACCACCATCCC
AGGACTTTGGAGACTGCTTCGTAATTGCTTATATTCCATTGTCATTGTTC
TCCGGGCTGTCCTGGGAAGAGTGATCAACGACCCTGTATTGGCTGCTCAC
CGCAGTGCTCCGTTCATATCCATGCAGGTTCTCCATATTCTGCGGAATCT
CTATTTCATATCATCCCGCATGGGCCAGAACGCTTCTTCGCAGCACATGT
TCGTGACCTTAACAGCCGTGGATATCCTCTCACATTATCCCGATCTAGCC
GAGAATTTTCTGAGAAGCATCAAGCCCAGTGAGCTCGGCCAGATCCCCGA
CCATCCTATCGAGCGATGCCTGGACCTGTTCTTCCTCAACACGTCGGAGC
TTTTTACACCCTTGCTATCACCCGCATGCAGCGAAGAGCTTCTCGTTGCA
GCAGCCGTTCCTTACCTTCCAGCAGGCGGAAATAACCATCTCCTCGAGAT
CTTCGAAGCCGCCCACAGCACGGTCCTAGCCGTATTCGCCATCCCGAACA
ACGCCGCCGTAGCAGCCAAACATCTCCCATTCTACATCGACAACCTATTT
GCTGTAAGCTACCTTCTCACCATCCCTAGAGTTCCCCAGCTAATAATCCT
TTCCAGGTATTCCCCGAAAACCTCTCAGCCCGTCAATTCCGACTAGCCTT
TAAAACCGTCATCCAAGTCACGGCACCCCCCTCCCCAATCGCCAACACCC
AGCGTCTCCTCCCATCCACCCTCCTCGAAGTTCTCTACGACCGAGCACTC
CACGCATCCGACCAACTACTCCCCGAACCAACATCGACGCAACTCGAGGG
CCCCGACCTCGGCAAATCCCCGCCCGTGTCGGAACAAGCAGCCCTGACCC
TCGCGCTTATTGACAGTCTCTGTTTCTTGCGCGTCGAAGACCTTGAGGAG
TGGCTTCCTCTCACGGCGCACTTGCTCAACACCATCAAGACCCCGGATAT
GCATAAGCAATGCGTGGAACGGTTCTGGGAGGCGCTGAGTAGCGGCGAGA
TGGATGTTGAACGGGCGCATTTCTGCGTCACGTGGTGGAGTACGCGTGGT
GGGAGGGAGCTCGTTCTTTATGGGGATGACTTCGGGGCCGATGCGGAACA
TAGGCATGATGAGGCTGAGGGACAGGGACAGGAACAGGGGGCGTATATGA
GTGGTGCTCTTGGTGCGGTGGCGAGGGAGAGTAAGCTTTAG back to topCoding sequence (CDS) from alignment at ch3:2580945..2583235- >KJC3_003673-T2 ID=KJC3_003673-T2|Name=KJC3_003673-T2|organism=Aspergillus niger KJC3|type=CDS|length=3162bp|location=Sequence derived from alignment at ch3:2580945..2583235- (Aspergillus niger KJC3)
GTATTCCCCGAAAACCTCTCAGCCCGTCAATTCCGACTAGCCTTTAAAAC
CGTCATCCAAGTCACGGCACCCCCCTCCCCAATCGCCAACACCCAGCGTC
TCCTCCCATCCACCCTCCTCGAAGTTCTCTACGACCGAGCACTCCACGCA
TCCGACCAACTACTCCCCGAACCAACATCGACGCAACTCGAGGGCCCCGA
CCTCGGCAAATCCCCGCCCGTGTCGGAACAAGCAGCCCTGACCCTCGCGC
TTATTGACAGTCTCTGTTTCTTGCGCGTCGAAGACCTTGAGGAGTGGCTT
CCTCTCACGGCGCACTTGCTCAACACCATCAAGACCCCGGATATGCATAA
GCAATGCGTGGAACGGTTCTGGGAGGCGCTGAGTAGCGGCGAGATGGATG
TTGAACGGGCGCATTTCTGCGTCACGTGGTGGAGTACGCGTGGTGGGAGG
GAGCTCGTTCTTTATGGGGATGACTTCGGGGCCGATGCGGAACATAGGCA
TGATGAGGCTGAGGGACAGGGACAGGAACAGGGGGCGTATATGAGTGGTG
CTCTTGGTGCGGTGGCGAGGGAGAGTAAGCTTTAGATGGTTCTGAACTAC
TCCTTTGAACTGCTATCGGACTCCGAAAGGAGCAAGCTTGACTACGACAT
CTTGCTACCCGTCATGGTCAATGCCACCTATGCATCACCTGAAGGCTTGG
AGGGAGGATACTTCCTAGGTACTGTGGACAAAGACATTGTGGAAGCCCCT
GGCAAGCAATTCCAGTGGTTGGCACAGTCTGACACGTTTGCTCGTGTGAC
GGCGATCTCATCTAGTCCTCTCGTGTCTGCCCTAGGGCCTCTGTCCCGGC
TCATGGCGCATGCCATTGAAAACGCAAAAGACCCTGGTCTGGTTGCTCAG
ACTTTGGACCACATCACGGACTTTGTGCGTACACTTATGGTGCAGTGGCG
GCTCAACAAGTTATCGGAGGTCGACAAATCTGAGGAAGCTGAGTTCCTTG
ACGCCGAGTCGTTGAGGACCACCATCCCAGGACTTTGGAGACTGCTTCGT
AATTGCTTATATTCCATTGTCATTGTTCTCCGGGCTGTCCTGGGAAGAGT
GATCAACGACCCTGTATTGGCTGCTCACCGCAGTGCTCCGTTCATATCCA
TGCAGGTTCTCCATATTCTGCGGAATCTCTATTTCATATCATCCCGCATG
GGCCAGAACGCTTCTTCGCAGCACATGTTCGTGACCTTAACAGCCGTGGA
TATCCTCTCACATTATCCCGATCTAGCCGAGAATTTTCTGAGAAGCATCA
AGCCCAGTGAGCTCGGCCAGATCCCCGACCATCCTATCGAGCGATGCCTG
GACCTGTTCTTCCTCAACACGTCGGAGCTTTTTACACCCTTGCTATCACC
CGCATGCAGCGAAGAGCTTCTCGTTGCAGCAGCCGTTCCTTACCTTCCAG
CAGGCGGAAATAACCATCTCCTCGAGATCTTCGAAGCCGCCCACAGCACG
GTCCTAGCCGTATTCGCCATCCCGAACAACGCCGCCGTAGCAGCCAAACA
TCTCCCATTCTACATCGACAACCTATTTGCTGTATTCCCCGAAAACCTCT
CAGCCCGTCAATTCCGACTAGCCTTTAAAACCGTCATCCAAGTCACGGCA
CCCCCCTCCCCAATCGCCAACACCCAGCGTCTCCTCCCATCCACCCTCCT
CGAAGTTCTCTACGACCGAGCACTCCACGCATCCGACCAACTACTCCCCG
AACCAACATCGACGCAACTCGAGGGCCCCGACCTCGGCAAATCCCCGCCC
GTGTCGGAACAAGCAGCCCTGACCCTCGCGCTTATTGACAGTCTCTGTTT
CTTGCGCGTCGAAGACCTTGAGGAGTGGCTTCCTCTCACGGCGCACTTGC
TCAACACCATCAAGACCCCGGATATGCATAAGCAATGCGTGGAACGGTTC
TGGGAGGCGCTGAGTAGCGGCGAGATGGATGTTGAACGGGCGCATTTCTG
CGTCACGTGGTGGAGTACGCGTGGTGGGAGGGAGCTCGTTCTTTATGGGG
ATGACTTCGGGGCCGATGCGGAACATAGGCATGATGAGGCTGAGGGACAG
GGACAGGAACAGGGGGCGTATATGAGTGGTGCTCTTGGTGCGGTGGCGAG
GGAGAGTAAGCTTTAGATGGTTCTGAACTACTCCTTTGAACTGCTATCGG
ACTCCGAAAGGAGCAAGCTTGACTACGACATCTTGCTACCCGTCATGGTC
AATGCCACCTATGCATCACCTGAAGGCTTGGAGGGAGGATACTTCCTAGG
TACTGTGGACAAAGACATTGTGGAAGCCCCTGGCAAGCAATTCCAGTGGT
TGGCACAGTCTGACACGTTTGCTCGTGTGACGGCGATCTCATCTAGTCCT
CTCGTGTCTGCCCTAGGGCCTCTGTCCCGGCTCATGGCGCATGCCATTGA
AAACGCAAAAGACCCTGGTCTGGTTGCTCAGACTTTGGACCACATCACGG
ACTTTGTGCGTACACTTATGGTGCAGTGGCGGCTCAACAAGTTATCGGAG
GTCGACAAATCTGAGGAAGCTGAGTTCCTTGACGCCGAGTCGTTGAGGAC
CACCATCCCAGGACTTTGGAGACTGCTTCGTAATTGCTTATATTCCATTG
TCATTGTTCTCCGGGCTGTCCTGGGAAGAGTGATCAACGACCCTGTATTG
GCTGCTCACCGCAGTGCTCCGTTCATATCCATGCAGGTTCTCCATATTCT
GCGGAATCTCTATTTCATATCATCCCGCATGGGCCAGAACGCTTCTTCGC
AGCACATGTTCGTGACCTTAACAGCCGTGGATATCCTCTCACATTATCCC
GATCTAGCCGAGAATTTTCTGAGAAGCATCAAGCCCAGTGAGCTCGGCCA
GATCCCCGACCATCCTATCGAGCGATGCCTGGACCTGTTCTTCCTCAACA
CGTCGGAGCTTTTTACACCCTTGCTATCACCCGCATGCAGCGAAGAGCTT
CTCGTTGCAGCAGCCGTTCCTTACCTTCCAGCAGGCGGAAATAACCATCT
CCTCGAGATCTTCGAAGCCGCCCACAGCACGGTCCTAGCCGTATTCGCCA
TCCCGAACAACGCCGCCGTAGCAGCCAAACATCTCCCATTCTACATCGAC
AACCTATTTGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003673-T2.utr5p1 | KJC3_003673-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR030476 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2580945..2583235 - |
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