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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2590154..2591056+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003679-T1 ID=KJC3_003679-T1|Name=KJC3_003679-T1|organism=Aspergillus niger KJC3|type=mRNA|length=903bp|location=Sequence derived from alignment at ch3:2590154..2591056+ (Aspergillus niger KJC3)
ATGTCCTCCAAGTCGCAATTGACCTACACTGCCCGTGCCAGCAAGCATCC
CAATGCTCTGGCGAAGAGGCTGTTCGAGATTGCCGAGGCCAAGAAGACCA
ATGTGACTGTCTCGGCTGACGTTACCACCACTAAGGAGCTACTAGATCTT
GCTGACCGTAGGCCGACCCGCTACTCTGCCTGATTATGCTGCATGCAAAC
TTATTAACGGTGATACCGGACTGCAGGTCTCGGTCCCTACATTGCCGTGA
TCAAAACCCACATCGATATCCTCTCTGATTTCAGCAACGAGACCATTGAG
GGACTTAAGGCTCTCGCGCAGAAGCACAACTTTCTCATCTTCGAGGACCG
CAAGTTCATTGACATCGGCAACACGGTCCAGAAGCAATACCACGGCGGTA
CCCTCCGTATCTCGGAATGGGCCCACATCATCAACTGCAGCATTCTCCCT
GGTGAGGGTATCGTCGAGGCTCTCGCTCAGACGGCGTCTGCACCGGACTT
CGCCTACGGCCCCGAACGCGGTCTGTTGATCTTGGCAGAGATGACCTCTA
AGGGCTCCTTGGCTACCGGCCAGTACACTACTTCCTCGGTCGATTATGCC
CGGAAATACAAGAACTTCGTTATGGGATTCGTGTCGACGCGCGCGTTGGG
TGAGGTGCAGTCGGAAGTCAGCTCTCCTTCGGATGAGGAGGACTTTGTGG
TCTTCACGACTGGTGTGAACATTTCTTCCAAGGGAGATAAGCTTGGTCAG
CAGTACCAGACGCCCGGATCGGCTATCGGCCGGGGTGCTGACTTCATTAT
CGCGGGTCGCGGTATCTACGCCGCGCCGGATCCGGTGCAGGCTGCGCAAC
AGTATCAGAAGGAGGGGTGGGAAGCCTACCTGGCCCGTGTCGGCGGAAAC
TAA back to topCoding sequence (CDS) from alignment at ch3:2590154..2591056+ >KJC3_003679-T1 ID=KJC3_003679-T1|Name=KJC3_003679-T1|organism=Aspergillus niger KJC3|type=CDS|length=1668bp|location=Sequence derived from alignment at ch3:2590154..2591056+ (Aspergillus niger KJC3)
ATGTCCTCCAAGTCGCAATTGACCTACACTGCCCGTGCCAGCAAGCATCC
CAATGCTCTGGCGAAGAGGCTGTTCGAGATTGCCGAGGCCAAGAAGACCA
ATGTGACTGTCTCGGCTGACGTTACCACCACTAAGGAGCTACTAGATCTT
GCTGACCGTCTCGGTCCCTACATTGCCGTGATCAAAACCCACATCGATAT
CCTCTCTGATTTCAGCAACGAGACCATTGAGGGACTTAAGGCTCTCGCGC
AGAAGCACAACTTTCTCATCTTCGAGGACCGCAAGTTCATTGACATCGGC
AACACGGTCCAGAAGCAATACCACGGCGGTACCCTCCGTATCTCGGAATG
GGCCCACATCATCAACTGCAGCATTCTCCCTGGTGAGGGTATCGTCGAGG
CTCTCGCTCAGACGGCGTCTGCACCGGACTTCGCCTACGGCCCCGAACGC
GGTCTGTTGATCTTGGCAGAGATGACCTCTAAGGGCTCCTTGGCTACCGG
CCAGTACACTACTTCCTCGGTCGATTATGCCCGGAAATACAAGAACTTCG
TTATGGGATTCGTGTCGACGCGCGCGTTGGGTGAGGTGCAGTCGGAAGTC
AGCTCTCCTTCGGATGAGGAGGACTTTGTGGTCTTCACGACTGGTGTGAA
CATTTCTTCCAAGGGAGATAAGCTTGGTCAGCAGTACCAGACGCCCGGAT
CGGCTATCGGCCGGGGTGCTGACTTCATTATCGCGGGTCGCGGTATCTAC
GCCGCGCCGGATCCGGTGCAGGCTGCGCAACAGTATCAGAAGGAGGGGTG
GGAAGCCTACCTGGCCCGTGTCGGCGGAAACTAAATGTCCTCCAAGTCGC
AATTGACCTACACTGCCCGTGCCAGCAAGCATCCCAATGCTCTGGCGAAG
AGGCTGTTCGAGATTGCCGAGGCCAAGAAGACCAATGTGACTGTCTCGGC
TGACGTTACCACCACTAAGGAGCTACTAGATCTTGCTGACCGTCTCGGTC
CCTACATTGCCGTGATCAAAACCCACATCGATATCCTCTCTGATTTCAGC
AACGAGACCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCACAACTTTCT
CATCTTCGAGGACCGCAAGTTCATTGACATCGGCAACACGGTCCAGAAGC
AATACCACGGCGGTACCCTCCGTATCTCGGAATGGGCCCACATCATCAAC
TGCAGCATTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGCTCAGACGGC
GTCTGCACCGGACTTCGCCTACGGCCCCGAACGCGGTCTGTTGATCTTGG
CAGAGATGACCTCTAAGGGCTCCTTGGCTACCGGCCAGTACACTACTTCC
TCGGTCGATTATGCCCGGAAATACAAGAACTTCGTTATGGGATTCGTGTC
GACGCGCGCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTCCTTCGGATG
AGGAGGACTTTGTGGTCTTCACGACTGGTGTGAACATTTCTTCCAAGGGA
GATAAGCTTGGTCAGCAGTACCAGACGCCCGGATCGGCTATCGGCCGGGG
TGCTGACTTCATTATCGCGGGTCGCGGTATCTACGCCGCGCCGGATCCGG
TGCAGGCTGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCCTACCTGGCC
CGTGTCGGCGGAAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044205 | 'de novo' UMP biosynthetic process |
| GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004590 | orotidine-5'-phosphate decarboxylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263Q7N |
| DBxref | InterPro:IPR011060 |
| DBxref | InterPro:IPR018089 |
| DBxref | InterPro:IPR014732 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR001754 |
| DBxref | PFAM:PF00215 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2590154..2591056 + |
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