|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2630517..2633103- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003692-T1 ID=KJC3_003692-T1|Name=KJC3_003692-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2587bp|location=Sequence derived from alignment at ch3:2630517..2633103- (Aspergillus niger KJC3)
TGATGTTATCGCGGGTACGGCAATTGGGCCGACCAGCATTTTTTTTTTCG
GATGTCCGATTAGCCGGCAGCCAACCTCCGACAGTGGAGATCCACTTTTA
CTACGACTGTCGCCAACTGACTGGCAAACCCGACGCGGAAAGAAGCCGCT
GGCATGGCTTGGTTCGTAAAAGAACCAATGAGAACCATGGGATCTTATCC
CTGTGCAGTGGGCCATATGGCAGGAATGCTGGGTCTCGGTCGTCTCTGCT
CGGCGGTGCCTCCGATCCCCTATGAATTTAACAGGTTAAAGACTCGGACG
ACGCATGCGGCCAAACGTTGATAAACCAGCACTTCTCGTCCCATATATTG
TGCAAAGCAGTTGGTTGGCGCGGAATTGCCCTGTTCTCATCAGTTATTGC
ATATATATTTGTTTTGCATCTAGCCTGAAACCGAAGCTGTACACACTCAG
TCGACAAGACTCGGTTGCTGACAGGCATCCAATTTGGTCAAATTTGGTCA
CCCGATTGTACAGTTTCCCATTTATCTTATCTATAATACCATGTTCGGAA
TTCCTGCCTCCATAAATCCTATATTGGCATAGACAGAACAGAACAGAATG
AATCGACAACAGGCTGCGGAGAAAGCCTTGCATGACCAGACTAATATCTT
GCCTATCGGGCAATTGCTGGTTGTATTTACGGGGCTCGCAGTTTCTCTGC
TGATCACCTTTGTGGATCAAAATGGTATCAGCGTTACTCTTCCCACAATT
GCCAGGGATCTCAGCGCTCAGGATACCATTTCATGGGCAGGCACATCCTC
CCTTATTGCAAATACCATGTTCACGGTGCTTTATGGTCGGCTGTCTGATA
TCTTCGGCCGAAAGATAGTCTATTTGTGTGCCTTGGCACTGCTTTGCATT
GCCGATCTATTGTGCGGTCTATCTCAGAATGCTCCAATGTTCTATGTCTT
TCGAGGATTGGCCGGTGTAGCTGGCGGCGGTGTTACCTCCCTAACGATGA
TCATTGTGTCTGACATCGTTACCCTCAGAGACCGGGGCAAATACCAAGGA
ATCCTGGGTGCGGCCCTAGGGATGGGCAACGTTATCGGTCCGTTCATCGC
TGCAGCATTCGTCATGGACTCGACATGGCGAGGTTTCTTCTGGCTCATTT
CTCCGCTCTCTGCATGCTCCATTGTCGTGGGCTATTTCCTTATTCCAAAT
AATGCGCGGAAGGACAGCTTCCGGAAAAATGCCCGCAAGATTGACTTTTA
TGGTATCTTATCTTCGTCCATTGGAATCATCTTCTTGTTGATCCCTATAT
CGGGAGGCGGCTCTTACTTTAACTGGGATTCGGCGATGGTGATTAGCATG
CTCACCATCGCGGGCTGCGCTTTGATTGCATTTCTCATAATCGAATGGAA
AGTGGCAGTATTGCCTATGCTTCCAAGTATGTCACCAATTGAGCCTCGAT
ACTTAGAACCGGTAGCTAACCCTTGAGCAGTGGTATTCTTCAAGAACAGG
GTGATCTGCACTCTGTTTTTGCAGAGCTTCCTTTTTGGAGCTGTGTACCA
GTCGTCTCTCTACTACTTGCCCCTGTACTACCAGAACGCCCGGGATTGGT
CCCCGATTGTTTCTGCTGCACTAACGGCCCCGATGGTCGCCTGTCAGTCT
GTGGCTTCCGTCTTATCTGGCCAGTATATTTCCCGGCGCAAACGTTACGG
GGAGGTGATCTGGGCTGGCTTTTTCTTCTGGACGCTGTAAGTGACCCGGC
CGAAGTCTAACCCAATATTTGATATCTTTGTTCTGACAATTTATCCAGTG
GAGCCGGTCTGATGCTTCTATTTGACCGTCACACCAGCCCAGGAGCTATT
GCTGTTATTGTCGGTATCGCTGGGATAGGCGTTGGAGGCGTCTTCCAACC
GACCATGGTCGCTTTTCAGGCGCATTGTACGAAGGCCCAGCGAGCTGTTG
TCATCTCGGACCGGAACTTCTTCCGCTGCCTAGGTGGTGCATGTGGTTTG
GCTGTCTCAGCTGCGATCTTGCAGGCAACGCTGCGATCCAACCTCCCTGT
GGGATACAGGGATATTGCTGAATCGTCCTATTCGCTCCCGTCGAGGGCCG
GGATCCCCGATGCCGACTGGGAGCAGATCCTTGACGCATATGCTAAGGCT
TCCCACTCGGTGTTCATCTTCCAAGTCCCGCTGATGGGGGCATGTCTTCT
TGCCTGTGTTTTTATCCGTGACCGGGGGCTGGAGAGGCCTAAGGATCAGT
TTGAGATAGAAGAAGAGAAGAGGCAAGAGGAAGAGAAGCGGCGGCAAGAA
CAGGCCCAAGCACAGGCCGAGAAGCAGATTGCAGCTGGTAATAGTGAAGC
CGAACCGGAGCAGGTTGCTGAATCCCATGCCAGTGGTGAGATGGAGAGTG
CATCTCGCTCCGAAAAGAAAACGGAACCAGAGCCGTAAGGAGGTTATGAG
GTGCAATGAATCTACGAATGATATAAGTCCGGCATAGATGGCGTTTCAGC
GATACAAAAAGAAGTCCACTGCGGTGATACGCATCCATTGGTATATGATA
TAATATTCTTTAGTATAGGGGGAATACACTTGATAGT back to topCoding sequence (CDS) from alignment at ch3:2630517..2633103- >KJC3_003692-T1 ID=KJC3_003692-T1|Name=KJC3_003692-T1|organism=Aspergillus niger KJC3|type=CDS|length=5175bp|location=Sequence derived from alignment at ch3:2630517..2633103- (Aspergillus niger KJC3)
TGGAGCCGGTCTGATGCTTCTATTTGACCGTCACACCAGCCCAGGAGCTA
TTGCTGTTATTGTCGGTATCGCTGGGATAGGCGTTGGAGGCGTCTTCCAA
CCGACCATGGTCGCTTTTCAGGCGCATTGTACGAAGGCCCAGCGAGCTGT
TGTCATCTCGGACCGGAACTTCTTCCGCTGCCTAGGTGGTGCATGTGGTT
TGGCTGTCTCAGCTGCGATCTTGCAGGCAACGCTGCGATCCAACCTCCCT
GTGGGATACAGGGATATTGCTGAATCGTCCTATTCGCTCCCGTCGAGGGC
CGGGATCCCCGATGCCGACTGGGAGCAGATCCTTGACGCATATGCTAAGG
CTTCCCACTCGGTGTTCATCTTCCAAGTCCCGCTGATGGGGGCATGTCTT
CTTGCCTGTGTTTTTATCCGTGACCGGGGGCTGGAGAGGCCTAAGGATCA
GTTTGAGATAGAAGAAGAGAAGAGGCAAGAGGAAGAGAAGCGGCGGCAAG
AACAGGCCCAAGCACAGGCCGAGAAGCAGATTGCAGCTGGTAATAGTGAA
GCCGAACCGGAGCAGGTTGCTGAATCCCATGCCAGTGGTGAGATGGAGAG
TGCATCTCGCTCCGAAAAGAAAACGGAACCAGAGCCGTAATGGTATTCTT
CAAGAACAGGGTGATCTGCACTCTGTTTTTGCAGAGCTTCCTTTTTGGAG
CTGTGTACCAGTCGTCTCTCTACTACTTGCCCCTGTACTACCAGAACGCC
CGGGATTGGTCCCCGATTGTTTCTGCTGCACTAACGGCCCCGATGGTCGC
CTGTCAGTCTGTGGCTTCCGTCTTATCTGGCCAGTATATTTCCCGGCGCA
AACGTTACGGGGAGGTGATCTGGGCTGGCTTTTTCTTCTGGACGCTATGA
ATCGACAACAGGCTGCGGAGAAAGCCTTGCATGACCAGACTAATATCTTG
CCTATCGGGCAATTGCTGGTTGTATTTACGGGGCTCGCAGTTTCTCTGCT
GATCACCTTTGTGGATCAAAATGGTATCAGCGTTACTCTTCCCACAATTG
CCAGGGATCTCAGCGCTCAGGATACCATTTCATGGGCAGGCACATCCTCC
CTTATTGCAAATACCATGTTCACGGTGCTTTATGGTCGGCTGTCTGATAT
CTTCGGCCGAAAGATAGTCTATTTGTGTGCCTTGGCACTGCTTTGCATTG
CCGATCTATTGTGCGGTCTATCTCAGAATGCTCCAATGTTCTATGTCTTT
CGAGGATTGGCCGGTGTAGCTGGCGGCGGTGTTACCTCCCTAACGATGAT
CATTGTGTCTGACATCGTTACCCTCAGAGACCGGGGCAAATACCAAGGAA
TCCTGGGTGCGGCCCTAGGGATGGGCAACGTTATCGGTCCGTTCATCGCT
GCAGCATTCGTCATGGACTCGACATGGCGAGGTTTCTTCTGGCTCATTTC
TCCGCTCTCTGCATGCTCCATTGTCGTGGGCTATTTCCTTATTCCAAATA
ATGCGCGGAAGGACAGCTTCCGGAAAAATGCCCGCAAGATTGACTTTTAT
GGTATCTTATCTTCGTCCATTGGAATCATCTTCTTGTTGATCCCTATATC
GGGAGGCGGCTCTTACTTTAACTGGGATTCGGCGATGGTGATTAGCATGC
TCACCATCGCGGGCTGCGCTTTGATTGCATTTCTCATAATCGAATGGAAA
GTGGCAGTATTGCCTATGCTTCCAATGGAGCCGGTCTGATGCTTCTATTT
GACCGTCACACCAGCCCAGGAGCTATTGCTGTTATTGTCGGTATCGCTGG
GATAGGCGTTGGAGGCGTCTTCCAACCGACCATGGTCGCTTTTCAGGCGC
ATTGTACGAAGGCCCAGCGAGCTGTTGTCATCTCGGACCGGAACTTCTTC
CGCTGCCTAGGTGGTGCATGTGGTTTGGCTGTCTCAGCTGCGATCTTGCA
GGCAACGCTGCGATCCAACCTCCCTGTGGGATACAGGGATATTGCTGAAT
CGTCCTATTCGCTCCCGTCGAGGGCCGGGATCCCCGATGCCGACTGGGAG
CAGATCCTTGACGCATATGCTAAGGCTTCCCACTCGGTGTTCATCTTCCA
AGTCCCGCTGATGGGGGCATGTCTTCTTGCCTGTGTTTTTATCCGTGACC
GGGGGCTGGAGAGGCCTAAGGATCAGTTTGAGATAGAAGAAGAGAAGAGG
CAAGAGGAAGAGAAGCGGCGGCAAGAACAGGCCCAAGCACAGGCCGAGAA
GCAGATTGCAGCTGGTAATAGTGAAGCCGAACCGGAGCAGGTTGCTGAAT
CCCATGCCAGTGGTGAGATGGAGAGTGCATCTCGCTCCGAAAAGAAAACG
GAACCAGAGCCGTAATGGTATTCTTCAAGAACAGGGTGATCTGCACTCTG
TTTTTGCAGAGCTTCCTTTTTGGAGCTGTGTACCAGTCGTCTCTCTACTA
CTTGCCCCTGTACTACCAGAACGCCCGGGATTGGTCCCCGATTGTTTCTG
CTGCACTAACGGCCCCGATGGTCGCCTGTCAGTCTGTGGCTTCCGTCTTA
TCTGGCCAGTATATTTCCCGGCGCAAACGTTACGGGGAGGTGATCTGGGC
TGGCTTTTTCTTCTGGACGCTATGAATCGACAACAGGCTGCGGAGAAAGC
CTTGCATGACCAGACTAATATCTTGCCTATCGGGCAATTGCTGGTTGTAT
TTACGGGGCTCGCAGTTTCTCTGCTGATCACCTTTGTGGATCAAAATGGT
ATCAGCGTTACTCTTCCCACAATTGCCAGGGATCTCAGCGCTCAGGATAC
CATTTCATGGGCAGGCACATCCTCCCTTATTGCAAATACCATGTTCACGG
TGCTTTATGGTCGGCTGTCTGATATCTTCGGCCGAAAGATAGTCTATTTG
TGTGCCTTGGCACTGCTTTGCATTGCCGATCTATTGTGCGGTCTATCTCA
GAATGCTCCAATGTTCTATGTCTTTCGAGGATTGGCCGGTGTAGCTGGCG
GCGGTGTTACCTCCCTAACGATGATCATTGTGTCTGACATCGTTACCCTC
AGAGACCGGGGCAAATACCAAGGAATCCTGGGTGCGGCCCTAGGGATGGG
CAACGTTATCGGTCCGTTCATCGCTGCAGCATTCGTCATGGACTCGACAT
GGCGAGGTTTCTTCTGGCTCATTTCTCCGCTCTCTGCATGCTCCATTGTC
GTGGGCTATTTCCTTATTCCAAATAATGCGCGGAAGGACAGCTTCCGGAA
AAATGCCCGCAAGATTGACTTTTATGGTATCTTATCTTCGTCCATTGGAA
TCATCTTCTTGTTGATCCCTATATCGGGAGGCGGCTCTTACTTTAACTGG
GATTCGGCGATGGTGATTAGCATGCTCACCATCGCGGGCTGCGCTTTGAT
TGCATTTCTCATAATCGAATGGAAAGTGGCAGTATTGCCTATGCTTCCAA
TGGAGCCGGTCTGATGCTTCTATTTGACCGTCACACCAGCCCAGGAGCTA
TTGCTGTTATTGTCGGTATCGCTGGGATAGGCGTTGGAGGCGTCTTCCAA
CCGACCATGGTCGCTTTTCAGGCGCATTGTACGAAGGCCCAGCGAGCTGT
TGTCATCTCGGACCGGAACTTCTTCCGCTGCCTAGGTGGTGCATGTGGTT
TGGCTGTCTCAGCTGCGATCTTGCAGGCAACGCTGCGATCCAACCTCCCT
GTGGGATACAGGGATATTGCTGAATCGTCCTATTCGCTCCCGTCGAGGGC
CGGGATCCCCGATGCCGACTGGGAGCAGATCCTTGACGCATATGCTAAGG
CTTCCCACTCGGTGTTCATCTTCCAAGTCCCGCTGATGGGGGCATGTCTT
CTTGCCTGTGTTTTTATCCGTGACCGGGGGCTGGAGAGGCCTAAGGATCA
GTTTGAGATAGAAGAAGAGAAGAGGCAAGAGGAAGAGAAGCGGCGGCAAG
AACAGGCCCAAGCACAGGCCGAGAAGCAGATTGCAGCTGGTAATAGTGAA
GCCGAACCGGAGCAGGTTGCTGAATCCCATGCCAGTGGTGAGATGGAGAG
TGCATCTCGCTCCGAAAAGAAAACGGAACCAGAGCCGTAATGGTATTCTT
CAAGAACAGGGTGATCTGCACTCTGTTTTTGCAGAGCTTCCTTTTTGGAG
CTGTGTACCAGTCGTCTCTCTACTACTTGCCCCTGTACTACCAGAACGCC
CGGGATTGGTCCCCGATTGTTTCTGCTGCACTAACGGCCCCGATGGTCGC
CTGTCAGTCTGTGGCTTCCGTCTTATCTGGCCAGTATATTTCCCGGCGCA
AACGTTACGGGGAGGTGATCTGGGCTGGCTTTTTCTTCTGGACGCTATGA
ATCGACAACAGGCTGCGGAGAAAGCCTTGCATGACCAGACTAATATCTTG
CCTATCGGGCAATTGCTGGTTGTATTTACGGGGCTCGCAGTTTCTCTGCT
GATCACCTTTGTGGATCAAAATGGTATCAGCGTTACTCTTCCCACAATTG
CCAGGGATCTCAGCGCTCAGGATACCATTTCATGGGCAGGCACATCCTCC
CTTATTGCAAATACCATGTTCACGGTGCTTTATGGTCGGCTGTCTGATAT
CTTCGGCCGAAAGATAGTCTATTTGTGTGCCTTGGCACTGCTTTGCATTG
CCGATCTATTGTGCGGTCTATCTCAGAATGCTCCAATGTTCTATGTCTTT
CGAGGATTGGCCGGTGTAGCTGGCGGCGGTGTTACCTCCCTAACGATGAT
CATTGTGTCTGACATCGTTACCCTCAGAGACCGGGGCAAATACCAAGGAA
TCCTGGGTGCGGCCCTAGGGATGGGCAACGTTATCGGTCCGTTCATCGCT
GCAGCATTCGTCATGGACTCGACATGGCGAGGTTTCTTCTGGCTCATTTC
TCCGCTCTCTGCATGCTCCATTGTCGTGGGCTATTTCCTTATTCCAAATA
ATGCGCGGAAGGACAGCTTCCGGAAAAATGCCCGCAAGATTGACTTTTAT
GGTATCTTATCTTCGTCCATTGGAATCATCTTCTTGTTGATCCCTATATC
GGGAGGCGGCTCTTACTTTAACTGGGATTCGGCGATGGTGATTAGCATGC
TCACCATCGCGGGCTGCGCTTTGATTGCATTTCTCATAATCGAATGGAAA
GTGGCAGTATTGCCTATGCTTCCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003692-T1.utr3p1 | KJC3_003692-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003692-T1.utr5p1 | KJC3_003692-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06609 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2630517..2633103 - |
|
