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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2636778..2637697- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003695-T1 ID=KJC3_003695-T1|Name=KJC3_003695-T1|organism=Aspergillus niger KJC3|type=mRNA|length=920bp|location=Sequence derived from alignment at ch3:2636778..2637697- (Aspergillus niger KJC3)
GCAGTAAACTCCCCCAGCAAGTTCAGAGTACCGTCAGTCTCCTGAGCGAC
ATTCTCCACACTTGACCCGGGAAAAATTTGTGATAAAACAAACCCTACCT
AGTCAGAAAGTTCTGTTCAGGTATGTCCAACTACTACTACGATTGTTTGC
CCTTTTTGGCAACGGTCTCGTTTGGCACCTGCCGGAGCTCCTAGAGCTTC
CCGCCTCGAGTCATTGAGCTAGAGTCGGGCAGCATTCTCATAATTTCTAT
GTTCAGCACGGAGAAATGCTATTGTCCTAGGGCTTATTATCCGGAGAAGT
GCAATAGACACTAATTCCGGCTCAATAGTGTCGATCATCATGGCTCCTCG
CTCTCAATTGGAGATCGCCACGGCATCTGTCGAGCGCCTGGTCAAAGAAG
AGGCCTCGTACCACCGTGAGCTGCAGCAGCAGACGGAAAGAGTCAAGAAG
CTGGAGTCCCAGGAGGGCGGCGATGACGAAAACAGAGAATATACACTGAG
GCAGGAGGTAAGTAACTAGTACAGTGGATATGCATAAAGGAGGTCGCTGA
CAATTGTTTTGATAGCGTCTGGCTCTCGAAGAAACCAAAAAGGTTCTCCC
GACATTGAAGCAGAAGATCGAGGATGCCATAGCCAAGCTCAATAGTTTGC
TGGTGAGTGACAAATTTCCCACAGGCTACTATATACAATTTATCTTGTGT
TGTCAGGAGGACTAAGCTTCTAAATTTATTGTTAGGTCGAGGAAGGAAAG
AAAGGCTCCGAAAGTAATGTCGAGCATATTAATGCTGCGAAGGAAGCCAT
CGCCAAAGCCCGAACAGCGGAGCGGGAGATCGCCTGAGATAGCTCATTTT
TCCATCTACTGGCACATGTACTTAATCCACAGCACGAAAAATTATTCAAT
AAATTGCCCCTGAGAAAAGC back to topCoding sequence (CDS) from alignment at ch3:2636778..2637697- >KJC3_003695-T1 ID=KJC3_003695-T1|Name=KJC3_003695-T1|organism=Aspergillus niger KJC3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch3:2636778..2637697- (Aspergillus niger KJC3)
GTCGAGGAAGGAAAGAAAGGCTCCGAAAGTAATGTCGAGCATATTAATGC
TGCGAAGGAAGCCATCGCCAAAGCCCGAACAGCGGAGCGGGAGATCGCCT
GACGTCTGGCTCTCGAAGAAACCAAAAAGGTTCTCCCGACATTGAAGCAG
AAGATCGAGGATGCCATAGCCAAGCTCAATAGTTTGCTGATGGCTCCTCG
CTCTCAATTGGAGATCGCCACGGCATCTGTCGAGCGCCTGGTCAAAGAAG
AGGCCTCGTACCACCGTGAGCTGCAGCAGCAGACGGAAAGAGTCAAGAAG
CTGGAGTCCCAGGAGGGCGGCGATGACGAAAACAGAGAATATACACTGAG
GCAGGAGGTCGAGGAAGGAAAGAAAGGCTCCGAAAGTAATGTCGAGCATA
TTAATGCTGCGAAGGAAGCCATCGCCAAAGCCCGAACAGCGGAGCGGGAG
ATCGCCTGACGTCTGGCTCTCGAAGAAACCAAAAAGGTTCTCCCGACATT
GAAGCAGAAGATCGAGGATGCCATAGCCAAGCTCAATAGTTTGCTGATGG
CTCCTCGCTCTCAATTGGAGATCGCCACGGCATCTGTCGAGCGCCTGGTC
AAAGAAGAGGCCTCGTACCACCGTGAGCTGCAGCAGCAGACGGAAAGAGT
CAAGAAGCTGGAGTCCCAGGAGGGCGGCGATGACGAAAACAGAGAATATA
CACTGAGGCAGGAGGTCGAGGAAGGAAAGAAAGGCTCCGAAAGTAATGTC
GAGCATATTAATGCTGCGAAGGAAGCCATCGCCAAAGCCCGAACAGCGGA
GCGGGAGATCGCCTGACGTCTGGCTCTCGAAGAAACCAAAAAGGTTCTCC
CGACATTGAAGCAGAAGATCGAGGATGCCATAGCCAAGCTCAATAGTTTG
CTGATGGCTCCTCGCTCTCAATTGGAGATCGCCACGGCATCTGTCGAGCG
CCTGGTCAAAGAAGAGGCCTCGTACCACCGTGAGCTGCAGCAGCAGACGG
AAAGAGTCAAGAAGCTGGAGTCCCAGGAGGGCGGCGATGACGAAAACAGA
GAATATACACTGAGGCAGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0048487 | beta-tubulin binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007021 | tubulin complex assembly |
| GO:0007023 | post-chaperonin tubulin folding pathway |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003695-T1.utr3p1 | KJC3_003695-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036126 |
| DBxref | InterPro:IPR004226 |
| DBxref | PFAM:PF02970 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2636778..2637697 - |
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