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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2662122..2667287- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003704-T1 ID=KJC3_003704-T1|Name=KJC3_003704-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5166bp|location=Sequence derived from alignment at ch3:2662122..2667287- (Aspergillus niger KJC3)
CTTCATCATCGCCCTCCATCCATCCAGCCATCCTCCCTCTTGACTAACTC
ATCTTTCCCTCCCCCACGTCATTCTTCTCTTCTTGCCCTCTTTTTATCCA
TCTTCCTTTCACTATCTAGCTACCTGCTGGTCTACTACTCTACCTCCGCC
GGCTGAAAGAAAGAGAGAAGGAAAGAAAGAAAGAAAGAAAACAGGTCCAC
TTCAGTGCTTGTTGACTCCCACGCTAGACGCCTCTTTTTTCCCTCCCGTT
CCTTGACGTGGGCGGCTATCATTGGGTCTCGCCGTCCCCCTCCCCTTGAC
TGGCCGATCGGGGTCCTCTTCTTTTCTCTTACTACTCTGTGTACGCACTT
GACGACGACTGGAACGACTTACTATACTTACTTAAGTAAGTCAGTACACA
GTCGTCGCTATCTAGCTATCTAGTACTTTCGGCCTATCTCCCGTGCTGCC
CTTAATCAAGACGCACCCGCTTGCTTGCTGGGTGCCCCGGTTACTGGCGA
AAACTGGGTCAGCTTCTCTCGGGTACCGGCTTAGTGCTATCACTACCAAG
CAGCTAGCTAGATACACTACCACTACACCCACTACACACTATTCTCTTGC
TGGGTTCTTGATGGCTGGATGGTTGGTTGGCGGTGCTACTACTGCTGACT
GCCACTGCTACGTACTCACTGGCTTGCCTGCCTGTCTGACAGATTCCGCA
GTCGAAAGTTTCTGACTTCGCAATCGATTCCTTGCGTCTGACAGCCTGTC
GAAACCTGGCTTGTCCGTTCGCCATTCCCTCCTGCCAGCTGCCAATAGAC
ATCATCAAACTCTCTGGATTCCCCTCCATCCATCCCTCCCTCCCTCTTCA
CCTCCACCATCCACAACCGTCCGCCTCCCGCAAGCCTCGTTCCGGCCATA
CCTGCAGTTGGCCACCTGGATCGACATCGTTCTCTCGTCCTTCCCGTGAG
CTAACGCGCTTGGGGCCTTGTTCTAGACGTTCCATCTCACCGTCTTCTGA
TCGAGTTATGTGCACGGTTGCGCCCGCGTTGACGGCTTCGGTCTACTTGG
ATTATTACTTGGTTTCCTGAAAAAAGGGCCCGGGCTAGGAAAACAACAAC
AACAATATCCTCCGCTGGGGTGGGCTGCATCATCATTCACCACACACACA
CACGCACATTCTCTCCCCCCTGGTTCTTGCATCCCTCTCTACAACCATCC
CCTCCTCCTCGCAGAGTTGATATACTTTTTCCTCCGTCTGGTAATTCTCA
AGGCCATCAGCAGCATGTGGCTGTCGTCCATTCGTCCTCCCACTCGGTTG
ATTGTGTAACGTGGTTTGGTACGACAGACAGGAAACCGCTGTTCTGAATA
TCCCAACGCGGCGACCACTTAGCTGTCGCCATTTTTTCGAGCCCCCCGAA
TCTCCTGACACCCAGTGCTTTATTTTTTTGTTGTCTCTTTTTTTTTCTTA
CCCTCCCCCCTTCCGTCCTGGGGTCTCCTGCCGGCTGGTGGCTCACCGAT
ACTTCATTATTGGGATTTACGTTTCCTTTTTTCTTCCTTTTTTTTTACCC
TTTTTTCTCTCATCCTCCCCTGTCCGGACCTTTGTTCCGGTTCCCTCTCG
GACTTCGTGATTTCTACCGGTCTTGTCAGAAAGCTCTGACTCGCCAGAGA
TCATGGCGGCGGAGTCCGGGAGGTCACCTTATCCCAATGGGACCTCTGGT
GGATCTCGTATGGCCCACGGAGATGAGGCTGCCTTGTCTGCACCACGCCG
ATCTGCCAGTGAGAGTGACATGATAGAAGTGCCACGTTCAACCTTTAGAT
CCCAAGCCCAGGGCTCCGCCGCGTCACAGCTGCCTAAGTTCTCGCATGCG
GTTCCTGGCGTCTCCACCTCAACGTCTACCACCAACTCGGCTATATCCTC
CCGCGAGTCCTCCCCCGTCCGCTCCTCTCGTCCGCGCAAAACCAGTGCAA
CCCCCCGTCACTCTACTTCTCGATCTCGCAAAGGCAGCATCGATCGCAGT
CCCAATCGTTCCATTGCATCGACGAATACTGGTTCTGGCACGCTCCCCTC
CGCCACGGTCGTACAACGAGCGCTGTCCCAGAACAGCAGACCTCCCGTCC
TCAGCCCACCCCCCAATGCCGAAGCGTTCTCCGATGTGCCCAGTCCGGAC
AAGTCCACCATGCCATTATGGGCCACAACGCGGCGGTCGGAACCACAAGA
ACCTACTCTTCCGAATACCTCTATCAAACGGTCAGTGCCGGATGACTTTG
CGACAAAGCCAGACCGGAGTGCTCCCCGTGCCGTAAATAGGGGCCAGGGG
TCGGCTCTGGAAACCGTTCAGGAGATGGCCAGTGATCAGTCCACACCGTC
GACCGATACGATCATGAACCGACCCCTGACTGAAGAGTCTCAGTTACAAA
AGATCGATGAGTCGGACGCCACCCCCAAGGCGTCGCGGTTCAACAATGAG
AGTGGCAGCGATAGTGGAGGGAACAAGAGCTCCGAGCCAATGGAGGGTTA
TCGCCGTCATTCTGCTTCGAAGACCCGGGGGACCAACGCCCTTCTCTCCA
AGCAGTCCTCTACGTCTTTGAGCGGCGGTCCTCGTGCCAAACCGGCGGAT
GGATCTGTCCGGAACATGATTGTCGAGACAGAGACCGTCAGCTCCATCCC
CCAGGTATCCTTAGCTGTGGCTACCGGGGACCGGGGCAACACTGGTCGGG
TTGATCCGTCGGGCACTCTTCGCATGAAGGGTAGCCAGGAGACAATCCGG
GCCAAGAAAGATAAGAAGCGGGTGCGCAAACCGGCGACCTTGGCCAGCGG
CGCTGCATCCTCCAAGGCGGACATTTTCGAAGCTAAGGTGGCCAGCGCCG
TTGACGAGGCCGATGTGTCCGACTCGGACGAAACGTTTGTGTACGAGTCC
AACCCTCCAGACCCGTATCCCGTGCGGCAGAATCGGTACCATTCCCGGAC
CCCCAGTGCCACCTCCATGGCCAGTCAGGTCGATCAGCTTTCTGCGGTTC
GCAGTCGGCCAGGAATTCGGGATGGCAACCACAGTGTGACCGGCAAGCGC
AGCATGAAGTTTACGAATAATACATTTGCTAGCGGAGCGGACGATCCCGG
CGAAGAGAGTGCCCGAAGCCACTCCCGAGTCGATAACGGCGGCACCCACA
CGCCCCGCCACCATCACATCGGGCGATACGGACGCAACAACAACCTGTAT
CCGTCCCTATTCGATCATGAGTCACCGTTCCCTCAGCCTCAGACACACCT
CAAGTCGCCCCGGCATTTTATCAGCGGCGGGTACCGGCAGTCCCGGCATC
CGGGGTCTCGCGCTGGACCCAACTACCGCACGATCAGCGGCACCAAAAAG
TCGAACGATGGCTACGGCTACGATTTTGATGCTGAAGGGGCGGATGATGA
GCGGACGCCGCTGGTAGGATCCCCCCGAGTGACACGCAGCCGTCATGGCG
CTGGTCGACGCCCCAATAGTGCTAGCCTACGCCAGATGGAATACCTCCAA
CAGCGGCAACGCGGGTATTTTTCGCGGTACGGTGCGTGTGTGATCATCAG
CCTGCTGCTCTTATTGCTCGTCGGGGGTGTGACGTCGTTCGTGGTGGCCT
CCACGAAGGCTCTCGTGGACGTGGAGATTCTAGACATCCAGAATGTTCTT
GCTTCCGAGCAGGAGATTATGTTGGATCTGAACGTACAAGCCATCAATCC
GAACTTGTTCCCCGTGTCCATTGACGATATGGATATGAACATCTTTGCCA
AGAGTCGATTCGTTGGGACCGACGAGCTTTGGCGCAAACTCAGCTCCGAC
TCGAGCTCCGTCCCCAGAGTGGAGAACAGCAGAAAACGAGCCGAGATGGC
TCTCATCGCTCGCTGCGCTGGCGATGCGAGTTGTCTGTCGAATAGCACCC
TATCGGTGCACGGCAAGAAGACCAAGGGCGGCGTGGACAAGGGCACGGAT
CCCATCGAGTCTGATCCGGCGGGCGATCCCCAGACTATGCTGCTGGGTCG
GGTGTTCCGATTTGATTCTCCTCTATCTTTCGAGCCGTCGCCATGGAATT
ATGTTCCTACGGCATCGAAAGGACAAATTCGGCTTGCCCGTCCGGGCAAC
AAGACGGAAGAAGGCGGCACGGAGCGATGGGAGCGGGTGCTTCAGCATGA
ATTTGACCTGATCGTCCGTGGTGTGGTCAAGTACCAGCTTCCACTGAGTT
CCCGTCTGCACTCAGCCTCTGTTAGTTCTAGCATCAAGGTAATCCCTAAC
GAGGACGATGACACGGATGGGGGCGGCAAGCATTCTCCGAACAACGAGAC
CGTCAGTATTTCGGGGACCAAGTATTATCGCCGGCTTCGACGCGCCCGAT
CCGAAAGTCCCGAGATCTCGACGTTTGAGACGGTGAGGAAGACCCTTGGG
TTCATCAAGCGAGCATTTACGGCGTGAAATTGGTTTCCCGTAGCTGTCGG
TCATGATCGCGTGGCTTCGCACTACTCAGCTGTGTCTCCTTCCCATACTT
TATCGTGCTGGCTTTCGTCTCAACGGTCTTTGGATCCCTGCCCTTTGCGG
AAGGTCAATCTATCCAGAATAAGGACTGAATGACCGGGTGTGACCCTTGC
ATATGGGGGTATCCCTCAAGAGGAGCAAGGGCTACTCCCCCTTGTGCCAC
TCGACATGGCGTATGACAGTACGCTATTGCGATAACGTGTTTCCTTTGTT
GGAGCTTTCATTTTATCAAACCTAGCGATTGGTCTATTTCTCAACTGATG
TGTAACGACCTGATAATTTCATCATGAAAAGAAAACGGCAGCAAAAGCAT
GGAGAACGGCACAGTTTTTTTTCTTCTTCTATTACAATAAAGGAAAAGAA
CGTTATGTATGCATCAGCACGGCGCTCTATACAGCTTTCTTTTTCTGGGA
GTATGTTTTTCACTTTTTCTTTCTCTTCTTACTTATTGTGTTGCTTGCTT
CAACTTGCGTGGTTGGTTTCTGGATGGGAGCGTTGTGTGTTTGATTAGAG
GGGAGCATCGGTGACGGGTGCACACGTTCTCTCTTGCTTTTGCTTCCGCA
TGGGGTGAGGGAAACCTACCATGCTTTTTTTGTATCTATGTATGTGTGTA
CATAATATTCTATATGAGGTGCTTGACTGTGCCACATTCGAAGAAGTTAA
TTGCATGATATGGTGG back to topCoding sequence (CDS) from alignment at ch3:2662122..2667287- >KJC3_003704-T1 ID=KJC3_003704-T1|Name=KJC3_003704-T1|organism=Aspergillus niger KJC3|type=CDS|length=2775bp|location=Sequence derived from alignment at ch3:2662122..2667287- (Aspergillus niger KJC3)
ATGGCGGCGGAGTCCGGGAGGTCACCTTATCCCAATGGGACCTCTGGTGG
ATCTCGTATGGCCCACGGAGATGAGGCTGCCTTGTCTGCACCACGCCGAT
CTGCCAGTGAGAGTGACATGATAGAAGTGCCACGTTCAACCTTTAGATCC
CAAGCCCAGGGCTCCGCCGCGTCACAGCTGCCTAAGTTCTCGCATGCGGT
TCCTGGCGTCTCCACCTCAACGTCTACCACCAACTCGGCTATATCCTCCC
GCGAGTCCTCCCCCGTCCGCTCCTCTCGTCCGCGCAAAACCAGTGCAACC
CCCCGTCACTCTACTTCTCGATCTCGCAAAGGCAGCATCGATCGCAGTCC
CAATCGTTCCATTGCATCGACGAATACTGGTTCTGGCACGCTCCCCTCCG
CCACGGTCGTACAACGAGCGCTGTCCCAGAACAGCAGACCTCCCGTCCTC
AGCCCACCCCCCAATGCCGAAGCGTTCTCCGATGTGCCCAGTCCGGACAA
GTCCACCATGCCATTATGGGCCACAACGCGGCGGTCGGAACCACAAGAAC
CTACTCTTCCGAATACCTCTATCAAACGGTCAGTGCCGGATGACTTTGCG
ACAAAGCCAGACCGGAGTGCTCCCCGTGCCGTAAATAGGGGCCAGGGGTC
GGCTCTGGAAACCGTTCAGGAGATGGCCAGTGATCAGTCCACACCGTCGA
CCGATACGATCATGAACCGACCCCTGACTGAAGAGTCTCAGTTACAAAAG
ATCGATGAGTCGGACGCCACCCCCAAGGCGTCGCGGTTCAACAATGAGAG
TGGCAGCGATAGTGGAGGGAACAAGAGCTCCGAGCCAATGGAGGGTTATC
GCCGTCATTCTGCTTCGAAGACCCGGGGGACCAACGCCCTTCTCTCCAAG
CAGTCCTCTACGTCTTTGAGCGGCGGTCCTCGTGCCAAACCGGCGGATGG
ATCTGTCCGGAACATGATTGTCGAGACAGAGACCGTCAGCTCCATCCCCC
AGGTATCCTTAGCTGTGGCTACCGGGGACCGGGGCAACACTGGTCGGGTT
GATCCGTCGGGCACTCTTCGCATGAAGGGTAGCCAGGAGACAATCCGGGC
CAAGAAAGATAAGAAGCGGGTGCGCAAACCGGCGACCTTGGCCAGCGGCG
CTGCATCCTCCAAGGCGGACATTTTCGAAGCTAAGGTGGCCAGCGCCGTT
GACGAGGCCGATGTGTCCGACTCGGACGAAACGTTTGTGTACGAGTCCAA
CCCTCCAGACCCGTATCCCGTGCGGCAGAATCGGTACCATTCCCGGACCC
CCAGTGCCACCTCCATGGCCAGTCAGGTCGATCAGCTTTCTGCGGTTCGC
AGTCGGCCAGGAATTCGGGATGGCAACCACAGTGTGACCGGCAAGCGCAG
CATGAAGTTTACGAATAATACATTTGCTAGCGGAGCGGACGATCCCGGCG
AAGAGAGTGCCCGAAGCCACTCCCGAGTCGATAACGGCGGCACCCACACG
CCCCGCCACCATCACATCGGGCGATACGGACGCAACAACAACCTGTATCC
GTCCCTATTCGATCATGAGTCACCGTTCCCTCAGCCTCAGACACACCTCA
AGTCGCCCCGGCATTTTATCAGCGGCGGGTACCGGCAGTCCCGGCATCCG
GGGTCTCGCGCTGGACCCAACTACCGCACGATCAGCGGCACCAAAAAGTC
GAACGATGGCTACGGCTACGATTTTGATGCTGAAGGGGCGGATGATGAGC
GGACGCCGCTGGTAGGATCCCCCCGAGTGACACGCAGCCGTCATGGCGCT
GGTCGACGCCCCAATAGTGCTAGCCTACGCCAGATGGAATACCTCCAACA
GCGGCAACGCGGGTATTTTTCGCGGTACGGTGCGTGTGTGATCATCAGCC
TGCTGCTCTTATTGCTCGTCGGGGGTGTGACGTCGTTCGTGGTGGCCTCC
ACGAAGGCTCTCGTGGACGTGGAGATTCTAGACATCCAGAATGTTCTTGC
TTCCGAGCAGGAGATTATGTTGGATCTGAACGTACAAGCCATCAATCCGA
ACTTGTTCCCCGTGTCCATTGACGATATGGATATGAACATCTTTGCCAAG
AGTCGATTCGTTGGGACCGACGAGCTTTGGCGCAAACTCAGCTCCGACTC
GAGCTCCGTCCCCAGAGTGGAGAACAGCAGAAAACGAGCCGAGATGGCTC
TCATCGCTCGCTGCGCTGGCGATGCGAGTTGTCTGTCGAATAGCACCCTA
TCGGTGCACGGCAAGAAGACCAAGGGCGGCGTGGACAAGGGCACGGATCC
CATCGAGTCTGATCCGGCGGGCGATCCCCAGACTATGCTGCTGGGTCGGG
TGTTCCGATTTGATTCTCCTCTATCTTTCGAGCCGTCGCCATGGAATTAT
GTTCCTACGGCATCGAAAGGACAAATTCGGCTTGCCCGTCCGGGCAACAA
GACGGAAGAAGGCGGCACGGAGCGATGGGAGCGGGTGCTTCAGCATGAAT
TTGACCTGATCGTCCGTGGTGTGGTCAAGTACCAGCTTCCACTGAGTTCC
CGTCTGCACTCAGCCTCTGTTAGTTCTAGCATCAAGGTAATCCCTAACGA
GGACGATGACACGGATGGGGGCGGCAAGCATTCTCCGAACAACGAGACCG
TCAGTATTTCGGGGACCAAGTATTATCGCCGGCTTCGACGCGCCCGATCC
GAAAGTCCCGAGATCTCGACGTTTGAGACGGTGAGGAAGACCCTTGGGTT
CATCAAGCGAGCATTTACGGCGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003704-T1.utr3p1 | KJC3_003704-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024260 |
| DBxref | PFAM:PF12751 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2662122..2667287 - |
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