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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2710919..2714684- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003709-T1 ID=KJC3_003709-T1|Name=KJC3_003709-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3766bp|location=Sequence derived from alignment at ch3:2710919..2714684- (Aspergillus niger KJC3)
GGGACAGTCCCATCTTTCGGATGAAGAATTGATCAGTTGGTCCTTGTCCG
AGAGACGATCAGACGTTGACAGCTATAGTGGCATCTACTGGGTGCAAATC
CTCCTTAGACTCAATTCTCGGATTTCAAATCTCATGAAATCACCCACGAG
GTGACCTAATCGATTTATATGTATGCATGATAATATCCCCGGATAAGGAC
GGAGTTGCACTTGCGCAATACTCGAGAAGAGGAGACAGAATTGCCACCGC
GGGACTTGTGATCTCCATCTTCCCTTCCAGGGATCACGTCTACTACAGTC
CCCTCCTTCACCCAGAATTGGGGGGGCATGTATTGGTCGAAACGCCATCA
GGAAAGGGTGGATCGGAAGTCAATTGACATCACAGCCCATAGAGAGGGTT
TCTGTTCTTTCGAAGAGCCCAAGAATGGGGGAGGGCGCTGGGCAGCCATG
GTTATCCCCATACTTTTTCCTTCCCCCGCAATATTGGGCCCGGGGAAATC
GCCAGGCACCTTCTCGGCGGGTAAAATAGAATTCAGAGGCAAAAATGTTT
AGTGGATTTACGGATGGATGAAATGAATGGATACGTATTGGCGATAAGAT
GGGAAGGGAAGAAAGGGAACGAATTGAATGGGTCCAACTCCACTTGGAGG
GGAGAATGATGGATTCCATGAAGCCCGGGAGTGTCGAAGGACTAACGAGA
GGCTAAGGCAAACTGAAGGCGACTAACCATTTGACCATTCGACTCTTTCA
TTCACTGCTATCTTATTTCAATGCATGCACTTCCCCCCCCCTCTCTCTCC
CTCTCCACTGCCATCCTCGCCTTTATCCAACATCCATCCAACAATTCCCA
CTGCCTCTTCTCCTCCATTCCTGGTTGCCACTATCGGTTAACAACAAAGT
CCCATTCTTTCCGCTGACTGGTTCATCTGCTTTCCACTACTTGATTTCCG
CCCTCTCATTTGTCTTTCCTCCTGTGTGCCTCGTGCTTCTCTTATTTTCC
CCCCACTGCCGGTTAGCTTCACATCGCAAAGTGATGAACTAAAGTCACTC
AGCCTCCGTCTAGTGCTGAGATCTCGCATCGCATCCACATCGCATCCCTA
TTAGTCTGTTGATTCGATTCCATTCGGCGCATAGAGTACTAGAGAAGACA
CAAACCATCACTGGTTCCCGTTCCGCCTTCCCGCACTTTAATTACGGGCA
TCATGTTTGGCTGGTGTAGTACCTTGGGTAAGCTTCGCCCTCCCGCTCGG
TCGTCAATCGCCTTCCCCTTGCTTTCTTTAGTCTCGTCCCGTCTCTTGTG
CGCTTCCTTCTGCTTTCTGTGAGTCGTGCGAAATTGGCGTGGGACCATCG
GAAAGTGGTTAGAGTGGTGTTGGTGGTGGTGTGATGATGGAGAGTCCCGG
TCGCTGACCCGGTCGCGCCTTGTCCCATCGTCTCCAGCTTCTAAGAGACA
ACTTGTGTGTCAGCATTTGATCCATGTTCAATTGCATTTATGGCCCCCAA
CCCTCCAGGCCTGCTGTCAGCCTGGCTGACTGACCTGAGCGCACTCACAG
AGCCCACTTTCTAATACTGACACGCGATGCAGGCCTGCCCTCCGTGAGCT
CAGAGCCGGAGAAAGAGCGCCGTCCTCCTCCCGCCCCCACGCTCCTTGAC
TTCCCCGTCTACCAGCTGCCGGAACTTTCGGATAAGGACCCGGAGGCTAC
TCTGTCGAGACTGAGTGAAGTGCTGGCGTCAATTCGACGACCACAGGATA
TCAACACGCAGAAATTCGAGGCGCTCAATCTGAGACTCGAAGAGAATGTG
TCTGCAGCAGACATCGTTCGTCCGAGCGGGGCAAATACAGCTCCTCCGCT
CCCTTGGGATAACTTGTCAGCTCGCTCATCCCCGGTAGATGAGGATGGCT
GTCCTATCCTGATGGACAACGGCAATTCATATCCCTCCAGAGACCGATTC
GAGGCGTTGCAGAACGAGCTCCTACTGGATAACGATGACGCTTTCAGAGA
GGTGGGCAGACTGCCGCCCCGCGACGGGCGTCCAAGGGTGCGTGTGGCTC
AAACGAGGAAATTCTGGACAGGCCTAGAACGGATGGCCCAATATTGGGAT
ACCAGTTTGGACGAGTACTACGAGCGCCCGAAATCACCGCCCCCTCCGGC
AGAGCAAGAAGAAGGCACAGACAAGATGCAGACGGATGGGGATGCCCAAC
CGCCAGCGGCCGAAGACAATTCGGAAACATCCATGGACGTCGACCCAGCG
CCGCCTGCAGAAGCGACAAAAGACGGTTCACAGGCGCAGCCAGACACAAA
GGAAGAAATGGTTACTATGTACAAGGGCCGCCGTCTTGGTGCCGGACACG
AGATGCCAGAGGATGTGCGCGAGGAGACCGTTCGAGCCTTGGCCGAAATG
GCTGCTTGGCCCTTTGGCTGCCAGGCAGCCCCTCCTATCTCTCCACCTCG
GCTGGCTGTGAAGACCTTGCTCTTCCCTGTCCGACACACTTTCCAGGCCG
CACGATCGCCAAAGGACCGTCAACTGGCGCGAAGCGGTATAATGGAAGGG
CCTATCTTTGCAGCTCAGTGCCGACCCGAGACCTCGTGGCGCGGGCCACA
CGATGCCCCAGGCTCTGGCATGGGAGAAGTGTGTGATTTGCTTCGGGAGG
TGGGTGCCATGCTCCTGACAGCTCAGGAACGGGCGAGACAAGGGGAAGCA
GAGGTGAGACCAGGTGAAGGCAAGTGGTGGACAACAGTGCCCCGATGGGG
CGGCGCTCCCAACGACTCCGTCAGTGACAATGAGAAGGAGACACATGGGG
AGGACAAGCTGCCATCGGAGTCTGGATATGCTCGCAAACGCTCCAAGTAC
GAGCACCCGTTCCTCGCATCGCGTCGACCGAGTTCGGCGCGAAAAATGAG
TAACAGCGACAGGTGGAAGATTATTCAGCCTGGGCCGGGTCTTTGGGATA
AGCGGATGCGGTATATACAGATTGGAAAGCCGCTCGACAGTGCATTTGAC
GATGTAAGCGTCCTGCTCCAATGCATGCTTTGTTTAGGTTACATTTACAG
AGACTAACTGAAACGGCAGATCTATCTATTGTCCTCTATCAATCATCATG
TGTCGATCCTTCATCTGCGTGTACACCGAAGATATCTCGAAGTTATCACC
AATGGGTCCAGCAACTTCCCGCCTGTAACCGACACGCCGGAGCAACCGTG
GTATGTTCTACAGCTACGACGTACCCGGTGGTACGACCTCCTCAAGGGTG
AAGACCGTGTGGAGGCGCTGAAGGGTATTTGGCGCATCTTCCACTATCTC
CTTCGACAGCAGCCGGAGACTCAGTTTCTGAACTGAGGCTGGGTTGGTGT
TCGTGTTTGACTCTTTTGTTTCATATACCACTTTTGTTCGCATTTGATAT
TAGACGACCGGAAGCAGCATCTACATTGCATGGCATGATCAGAGGGTATT
ATGACGGCTTGGATGTATTTGGCATTATGACATTCAGTTGGGCATTTACT
TTGGTTTCTCATCGGCTGAATCGATGTTCCTGTCTTAGATTGACTAGACG
TGTGAAAGACTGCTCCACAATAGAAATGCATGATGTTGCACAGGACCTGA
GGGGAGGAAATGCGCTCTATTTTAGGCAAAGCAATGCATATTCTGTCGGT
AACCGCGCCGTCAGTCTCTTGAAGCAGACAGCAGTATGAGTGAGATACCA
TTGTAACCTGACACCTTCTCACAATAACAGCGCCATACTCGAGATTCCAG
AACAAAAAGAAATCAA back to topCoding sequence (CDS) from alignment at ch3:2710919..2714684- >KJC3_003709-T1 ID=KJC3_003709-T1|Name=KJC3_003709-T1|organism=Aspergillus niger KJC3|type=CDS|length=5139bp|location=Sequence derived from alignment at ch3:2710919..2714684- (Aspergillus niger KJC3)
ATCTATCTATTGTCCTCTATCAATCATCATGTGTCGATCCTTCATCTGCG
TGTACACCGAAGATATCTCGAAGTTATCACCAATGGGTCCAGCAACTTCC
CGCCTGTAACCGACACGCCGGAGCAACCGTGGTATGTTCTACAGCTACGA
CGTACCCGGTGGTACGACCTCCTCAAGGGTGAAGACCGTGTGGAGGCGCT
GAAGGGTATTTGGCGCATCTTCCACTATCTCCTTCGACAGCAGCCGGAGA
CTCAGTTTCTGAACTGAGCCTGCCCTCCGTGAGCTCAGAGCCGGAGAAAG
AGCGCCGTCCTCCTCCCGCCCCCACGCTCCTTGACTTCCCCGTCTACCAG
CTGCCGGAACTTTCGGATAAGGACCCGGAGGCTACTCTGTCGAGACTGAG
TGAAGTGCTGGCGTCAATTCGACGACCACAGGATATCAACACGCAGAAAT
TCGAGGCGCTCAATCTGAGACTCGAAGAGAATGTGTCTGCAGCAGACATC
GTTCGTCCGAGCGGGGCAAATACAGCTCCTCCGCTCCCTTGGGATAACTT
GTCAGCTCGCTCATCCCCGGTAGATGAGGATGGCTGTCCTATCCTGATGG
ACAACGGCAATTCATATCCCTCCAGAGACCGATTCGAGGCGTTGCAGAAC
GAGCTCCTACTGGATAACGATGACGCTTTCAGAGAGGTGGGCAGACTGCC
GCCCCGCGACGGGCGTCCAAGGGTGCGTGTGGCTCAAACGAGGAAATTCT
GGACAGGCCTAGAACGGATGGCCCAATATTGGGATACCAGTTTGGACGAG
TACTACGAGCGCCCGAAATCACCGCCCCCTCCGGCAGAGCAAGAAGAAGG
CACAGACAAGATGCAGACGGATGGGGATGCCCAACCGCCAGCGGCCGAAG
ACAATTCGGAAACATCCATGGACGTCGACCCAGCGCCGCCTGCAGAAGCG
ACAAAAGACGGTTCACAGGCGCAGCCAGACACAAAGGAAGAAATGGTTAC
TATGTACAAGGGCCGCCGTCTTGGTGCCGGACACGAGATGCCAGAGGATG
TGCGCGAGGAGACCGTTCGAGCCTTGGCCGAAATGGCTGCTTGGCCCTTT
GGCTGCCAGGCAGCCCCTCCTATCTCTCCACCTCGGCTGGCTGTGAAGAC
CTTGCTCTTCCCTGTCCGACACACTTTCCAGGCCGCACGATCGCCAAAGG
ACCGTCAACTGGCGCGAAGCGGTATAATGGAAGGGCCTATCTTTGCAGCT
CAGTGCCGACCCGAGACCTCGTGGCGCGGGCCACACGATGCCCCAGGCTC
TGGCATGGGAGAAGTGTGTGATTTGCTTCGGGAGGTGGGTGCCATGCTCC
TGACAGCTCAGGAACGGGCGAGACAAGGGGAAGCAGAGGTGAGACCAGGT
GAAGGCAAGTGGTGGACAACAGTGCCCCGATGGGGCGGCGCTCCCAACGA
CTCCGTCAGTGACAATGAGAAGGAGACACATGGGGAGGACAAGCTGCCAT
CGGAGTCTGGATATGCTCGCAAACGCTCCAAGTACGAGCACCCGTTCCTC
GCATCGCGTCGACCGAGTTCGGCGCGAAAAATGAGTAACAGCGACAGGTG
GAAGATTATTCAGCCTGGGCCGGGTCTTTGGGATAAGCGGATGCGGTATA
TACAGATTGGAAAGCCGCTCGACAGTGCATTTGACGATATGTTTGGCTGG
TGTAGTACCTTGGATCTATCTATTGTCCTCTATCAATCATCATGTGTCGA
TCCTTCATCTGCGTGTACACCGAAGATATCTCGAAGTTATCACCAATGGG
TCCAGCAACTTCCCGCCTGTAACCGACACGCCGGAGCAACCGTGGTATGT
TCTACAGCTACGACGTACCCGGTGGTACGACCTCCTCAAGGGTGAAGACC
GTGTGGAGGCGCTGAAGGGTATTTGGCGCATCTTCCACTATCTCCTTCGA
CAGCAGCCGGAGACTCAGTTTCTGAACTGAGCCTGCCCTCCGTGAGCTCA
GAGCCGGAGAAAGAGCGCCGTCCTCCTCCCGCCCCCACGCTCCTTGACTT
CCCCGTCTACCAGCTGCCGGAACTTTCGGATAAGGACCCGGAGGCTACTC
TGTCGAGACTGAGTGAAGTGCTGGCGTCAATTCGACGACCACAGGATATC
AACACGCAGAAATTCGAGGCGCTCAATCTGAGACTCGAAGAGAATGTGTC
TGCAGCAGACATCGTTCGTCCGAGCGGGGCAAATACAGCTCCTCCGCTCC
CTTGGGATAACTTGTCAGCTCGCTCATCCCCGGTAGATGAGGATGGCTGT
CCTATCCTGATGGACAACGGCAATTCATATCCCTCCAGAGACCGATTCGA
GGCGTTGCAGAACGAGCTCCTACTGGATAACGATGACGCTTTCAGAGAGG
TGGGCAGACTGCCGCCCCGCGACGGGCGTCCAAGGGTGCGTGTGGCTCAA
ACGAGGAAATTCTGGACAGGCCTAGAACGGATGGCCCAATATTGGGATAC
CAGTTTGGACGAGTACTACGAGCGCCCGAAATCACCGCCCCCTCCGGCAG
AGCAAGAAGAAGGCACAGACAAGATGCAGACGGATGGGGATGCCCAACCG
CCAGCGGCCGAAGACAATTCGGAAACATCCATGGACGTCGACCCAGCGCC
GCCTGCAGAAGCGACAAAAGACGGTTCACAGGCGCAGCCAGACACAAAGG
AAGAAATGGTTACTATGTACAAGGGCCGCCGTCTTGGTGCCGGACACGAG
ATGCCAGAGGATGTGCGCGAGGAGACCGTTCGAGCCTTGGCCGAAATGGC
TGCTTGGCCCTTTGGCTGCCAGGCAGCCCCTCCTATCTCTCCACCTCGGC
TGGCTGTGAAGACCTTGCTCTTCCCTGTCCGACACACTTTCCAGGCCGCA
CGATCGCCAAAGGACCGTCAACTGGCGCGAAGCGGTATAATGGAAGGGCC
TATCTTTGCAGCTCAGTGCCGACCCGAGACCTCGTGGCGCGGGCCACACG
ATGCCCCAGGCTCTGGCATGGGAGAAGTGTGTGATTTGCTTCGGGAGGTG
GGTGCCATGCTCCTGACAGCTCAGGAACGGGCGAGACAAGGGGAAGCAGA
GGTGAGACCAGGTGAAGGCAAGTGGTGGACAACAGTGCCCCGATGGGGCG
GCGCTCCCAACGACTCCGTCAGTGACAATGAGAAGGAGACACATGGGGAG
GACAAGCTGCCATCGGAGTCTGGATATGCTCGCAAACGCTCCAAGTACGA
GCACCCGTTCCTCGCATCGCGTCGACCGAGTTCGGCGCGAAAAATGAGTA
ACAGCGACAGGTGGAAGATTATTCAGCCTGGGCCGGGTCTTTGGGATAAG
CGGATGCGGTATATACAGATTGGAAAGCCGCTCGACAGTGCATTTGACGA
TATGTTTGGCTGGTGTAGTACCTTGGATCTATCTATTGTCCTCTATCAAT
CATCATGTGTCGATCCTTCATCTGCGTGTACACCGAAGATATCTCGAAGT
TATCACCAATGGGTCCAGCAACTTCCCGCCTGTAACCGACACGCCGGAGC
AACCGTGGTATGTTCTACAGCTACGACGTACCCGGTGGTACGACCTCCTC
AAGGGTGAAGACCGTGTGGAGGCGCTGAAGGGTATTTGGCGCATCTTCCA
CTATCTCCTTCGACAGCAGCCGGAGACTCAGTTTCTGAACTGAGCCTGCC
CTCCGTGAGCTCAGAGCCGGAGAAAGAGCGCCGTCCTCCTCCCGCCCCCA
CGCTCCTTGACTTCCCCGTCTACCAGCTGCCGGAACTTTCGGATAAGGAC
CCGGAGGCTACTCTGTCGAGACTGAGTGAAGTGCTGGCGTCAATTCGACG
ACCACAGGATATCAACACGCAGAAATTCGAGGCGCTCAATCTGAGACTCG
AAGAGAATGTGTCTGCAGCAGACATCGTTCGTCCGAGCGGGGCAAATACA
GCTCCTCCGCTCCCTTGGGATAACTTGTCAGCTCGCTCATCCCCGGTAGA
TGAGGATGGCTGTCCTATCCTGATGGACAACGGCAATTCATATCCCTCCA
GAGACCGATTCGAGGCGTTGCAGAACGAGCTCCTACTGGATAACGATGAC
GCTTTCAGAGAGGTGGGCAGACTGCCGCCCCGCGACGGGCGTCCAAGGGT
GCGTGTGGCTCAAACGAGGAAATTCTGGACAGGCCTAGAACGGATGGCCC
AATATTGGGATACCAGTTTGGACGAGTACTACGAGCGCCCGAAATCACCG
CCCCCTCCGGCAGAGCAAGAAGAAGGCACAGACAAGATGCAGACGGATGG
GGATGCCCAACCGCCAGCGGCCGAAGACAATTCGGAAACATCCATGGACG
TCGACCCAGCGCCGCCTGCAGAAGCGACAAAAGACGGTTCACAGGCGCAG
CCAGACACAAAGGAAGAAATGGTTACTATGTACAAGGGCCGCCGTCTTGG
TGCCGGACACGAGATGCCAGAGGATGTGCGCGAGGAGACCGTTCGAGCCT
TGGCCGAAATGGCTGCTTGGCCCTTTGGCTGCCAGGCAGCCCCTCCTATC
TCTCCACCTCGGCTGGCTGTGAAGACCTTGCTCTTCCCTGTCCGACACAC
TTTCCAGGCCGCACGATCGCCAAAGGACCGTCAACTGGCGCGAAGCGGTA
TAATGGAAGGGCCTATCTTTGCAGCTCAGTGCCGACCCGAGACCTCGTGG
CGCGGGCCACACGATGCCCCAGGCTCTGGCATGGGAGAAGTGTGTGATTT
GCTTCGGGAGGTGGGTGCCATGCTCCTGACAGCTCAGGAACGGGCGAGAC
AAGGGGAAGCAGAGGTGAGACCAGGTGAAGGCAAGTGGTGGACAACAGTG
CCCCGATGGGGCGGCGCTCCCAACGACTCCGTCAGTGACAATGAGAAGGA
GACACATGGGGAGGACAAGCTGCCATCGGAGTCTGGATATGCTCGCAAAC
GCTCCAAGTACGAGCACCCGTTCCTCGCATCGCGTCGACCGAGTTCGGCG
CGAAAAATGAGTAACAGCGACAGGTGGAAGATTATTCAGCCTGGGCCGGG
TCTTTGGGATAAGCGGATGCGGTATATACAGATTGGAAAGCCGCTCGACA
GTGCATTTGACGATATGTTTGGCTGGTGTAGTACCTTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003709-T1.utr3p1 | KJC3_003709-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003709-T1.utr5p1 | KJC3_003709-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2710919..2714684 - |
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