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KJC3_003711-T1, KJC3_003711-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003711-T1
Unique NameKJC3_003711-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2718506..2720176-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003711-T1 ID=KJC3_003711-T1|Name=KJC3_003711-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1671bp|location=Sequence derived from alignment at ch3:2718506..2720176- (Aspergillus niger KJC3)
CAACGAACATCATCCGCCAACGACCGTCGATACGCCGACATCAAGATGTG
AGTCCATCTTCAGCTCTTGATTTTTGCTGCATCAAGGGGGGAAAATACTG
TTCGTCGCTGGACTGTATATCCTCCCCCTCTTCCCCCGTTCAGACGCCCC
GGATTCGCCTCCAGATGGCACTTTTTCGTGTCATACGCAGCAGCAACCCC
CCGATCGGTTTGGACTTCATGCTGACCGACTGCTTTTTTTTGCACCACAC
AGGGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTG
CGGCAAGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCA
ACGCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATC
ATCCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGC
CGCCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTA
CCAAGGAGGCTCGTATGCCCAGGTATGCTCGTTGTCCAACCCCTTTGAGT
GCCATTGCAAGGATTTTCTCGGTCGCCCACGACTATCAGCGAGATGCCAT
ATGCGAAGGAAAATGATAAAATGGATGAGTGCTGATGGATATCGGATTAA
AGCCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGCTCGT
CCGCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCACGAGCTCT
ACCACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCATCGAG
CACGTAAGTTTCGCCGCCATTTGCTTTTTTGATGAAATCGCTATACTCTC
GAGACTACGAAACGGAACGAGTGTATACGGTCTTCTGTTGGGAAGATGAG
GAAATAGGGGCTAACATGATCTCTTTCCATACTACAGATCCAGAAGGCCA
AGGCTGAGCGTCACCGTGAGCGCGTCCTCAAGGAGGAGATGGATGCTAAG
CGTGCCAAGAACAAGGCTCTCCGTGAGAGACGTCTGGAGCGCAAGGAGGC
CAAGCAGAACGCCCTCATTGCTGAGGCTCAGGAGTAATTTTCCTCAGCTA
AGGAACTTGGGCGGTGCGGAGGTTGAAACGGGGGAGGGAATCGATCAGCC
CACGGACTCTGATCGACCACTCCGTGTTCGTTGCAGGTCTGGCTCGGTGG
CTCGATTCATCCGGGACGGGGTTGTTTGGATCGTATCGGGAGCCTGGAAC
AGGGTTGGGGATCAAGGATATGCACCATCATCACCATCATCGTCATCCCC
GTCTCTTCCTCTTCACGGGGAAGAGCATGTGAAAGGACCACGCAAAAAAA
AGGAAAAAGACCTAACTGTTAAAGCAAAACAATGGCATGGCGCTTTGTGT
GATACGAAATTTCCAATTTTTTTTTACTATTTCTTCATCCTTTCGCCAAC
TCTTTCCTTCCTGGACCGTGAAAATCGCCTTTGAACTGCTATTCGATATT
AAAATCCAGCCAACTCCCGCCCGGATATATCTGTCCCTCTGCTGCTTTCT
GCCCAAGCACACGCTGCTTTTTCTTTCCTCTTTTTCCTCTGCACTGAACA
TGTAATGTCGTAACGCACATCCTGAATATCATTCCGAGGGTTAACACAAT
AGTCGGTTCCTTGTAATGGTC
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Coding sequence (CDS) from alignment at ch3:2718506..2720176-

>KJC3_003711-T1 ID=KJC3_003711-T1|Name=KJC3_003711-T1|organism=Aspergillus niger KJC3|type=CDS|length=2292bp|location=Sequence derived from alignment at ch3:2718506..2720176- (Aspergillus niger KJC3)
ATCCAGAAGGCCAAGGCTGAGCGTCACCGTGAGCGCGTCCTCAAGGAGGA
GATGGATGCTAAGCGTGCCAAGAACAAGGCTCTCCGTGAGAGACGTCTGG
AGCGCAAGGAGGCCAAGCAGAACGCCCTCATTGCTGAGGCTCAGGAGTAA
CCAGATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGCTCGTCC
GCTACCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCACGAGCTCTAC
CACCTGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCATCGAGCA
CGGTCAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTGC
GGCAAGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCAA
CGCCAACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATCA
TCCGCAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGCC
GCCGCCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTAC
CAAGGAGGCTCGTATGCCCAGATATCCAGAAGGCCAAGGCTGAGCGTCAC
CGTGAGCGCGTCCTCAAGGAGGAGATGGATGCTAAGCGTGCCAAGAACAA
GGCTCTCCGTGAGAGACGTCTGGAGCGCAAGGAGGCCAAGCAGAACGCCC
TCATTGCTGAGGCTCAGGAGTAACCAGATCCTCTGGATGCGCCGCATGCG
TATTCTCCGTCGCCTGCTCGTCCGCTACCGTGCCTCCGGCAAGATCGACA
AGCACCTGTACCACGAGCTCTACCACCTGAGCAAGGGTAACACCTTCAAG
CACAAGCGTTCCCTCATCGAGCACGGTCAACCTTCGCACCCAGAAGCGCC
TCGCCGCCTCCGTGGTGGGCTGCGGCAAGCGCAAGATTTGGCTCGACCCC
AATGAGATGAATGAGATCTCCAACGCCAACTCCCGCCAGACCATCCGCAA
GCTCGTCAGCGATGGCCTCATCATCCGCAAGCCCGTCACCATGCACTCCC
GCTCCCGTGCCCGTGAGCTCGCCGCCGCCCGCCGCATCGGCAGACACCGT
GGTCTGGGTAAGCGCAAGGGTACCAAGGAGGCTCGTATGCCCAGATATCC
AGAAGGCCAAGGCTGAGCGTCACCGTGAGCGCGTCCTCAAGGAGGAGATG
GATGCTAAGCGTGCCAAGAACAAGGCTCTCCGTGAGAGACGTCTGGAGCG
CAAGGAGGCCAAGCAGAACGCCCTCATTGCTGAGGCTCAGGAGTAACCAG
ATCCTCTGGATGCGCCGCATGCGTATTCTCCGTCGCCTGCTCGTCCGCTA
CCGTGCCTCCGGCAAGATCGACAAGCACCTGTACCACGAGCTCTACCACC
TGAGCAAGGGTAACACCTTCAAGCACAAGCGTTCCCTCATCGAGCACGGT
CAACCTTCGCACCCAGAAGCGCCTCGCCGCCTCCGTGGTGGGCTGCGGCA
AGCGCAAGATTTGGCTCGACCCCAATGAGATGAATGAGATCTCCAACGCC
AACTCCCGCCAGACCATCCGCAAGCTCGTCAGCGATGGCCTCATCATCCG
CAAGCCCGTCACCATGCACTCCCGCTCCCGTGCCCGTGAGCTCGCCGCCG
CCCGCCGCATCGGCAGACACCGTGGTCTGGGTAAGCGCAAGGGTACCAAG
GAGGCTCGTATGCCCAGATATCCAGAAGGCCAAGGCTGAGCGTCACCGTG
AGCGCGTCCTCAAGGAGGAGATGGATGCTAAGCGTGCCAAGAACAAGGCT
CTCCGTGAGAGACGTCTGGAGCGCAAGGAGGCCAAGCAGAACGCCCTCAT
TGCTGAGGCTCAGGAGTAACCAGATCCTCTGGATGCGCCGCATGCGTATT
CTCCGTCGCCTGCTCGTCCGCTACCGTGCCTCCGGCAAGATCGACAAGCA
CCTGTACCACGAGCTCTACCACCTGAGCAAGGGTAACACCTTCAAGCACA
AGCGTTCCCTCATCGAGCACGGTCAACCTTCGCACCCAGAAGCGCCTCGC
CGCCTCCGTGGTGGGCTGCGGCAAGCGCAAGATTTGGCTCGACCCCAATG
AGATGAATGAGATCTCCAACGCCAACTCCCGCCAGACCATCCGCAAGCTC
GTCAGCGATGGCCTCATCATCCGCAAGCCCGTCACCATGCACTCCCGCTC
CCGTGCCCGTGAGCTCGCCGCCGCCCGCCGCATCGGCAGACACCGTGGTC
TGGGTAAGCGCAAGGGTACCAAGGAGGCTCGTATGCCCAGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0022625cytosolic large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003711KJC3_003711Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003711-T1KJC3_003711-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003711-T1.cdsKJC3_003711-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003711-T1.utr3p1KJC3_003711-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003711-T1.exon4KJC3_003711-T1.exon4Aspergillus niger KJC3exon
KJC3_003711-T1.exon3KJC3_003711-T1.exon3Aspergillus niger KJC3exon
KJC3_003711-T1.exon2KJC3_003711-T1.exon2Aspergillus niger KJC3exon
KJC3_003711-T1.exon1KJC3_003711-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003711-T1.utr5p1KJC3_003711-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035970
DBxrefInterPro:IPR033935
DBxrefInterPro:IPR023638
DBxrefInterPro:IPR015972
DBxrefInterPro:IPR000196
DBxrefPFAM:PF01280
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2718506..2720176 -
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