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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2836571..2839105+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003739-T1 ID=KJC3_003739-T1|Name=KJC3_003739-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2535bp|location=Sequence derived from alignment at ch3:2836571..2839105+ (Aspergillus niger KJC3)
CAATTGACATTCATTATCCAACTCCCGAATAATGACAACCTTATGCTAAC
TATACTGTCTCATGTAGCCCAACTCACACCAACATGTCAGACCACATAGC
GATCACGTGGTGCTTATGCAAGAATTTCGTGAACTCGAGCGAAATGGCGA
ATGCGGTTGGTTGGCATGGCGTAAACGGCTACCGTCGGGAGGGGTATACC
ACCAATCTGTTACGAGATTTTTTGCCTTGCCAAAAAAATTTCCTTCTTCT
TGTCTTATTTCCTTACTTCTGATACCCCTATTATAGTCGCACAGGGCCCT
CAATTGCAGCTCCGTAAATTATCTTACCTCACGATCAACCCATTTGACGA
AGATCTGCTATCTCCGATACCTACCATGTCCACGATAACCACCCCGGCCG
GTCCTCCGGTGGCCCTTGATACAATCACCCAGAATATCGGCAATACTCCC
TTGGTCAAGCTTAACAGGATTCCGCGCAGCCTGGGAATCGAAGCCACCGT
CTATGCCAAATGTGAATATTTCAATGCTGGCGGGAGCGTGAAGGATCGTA
TCGCTTTGCGCATGATTGAAGAAGCGGAACGATCTGGGCGCATCAAGCCT
GGCGATACTTTGATCGAACCTACCAGCGGTAACACGTAGGTCCCGTTGCG
CAAATCACGCACATGATCCTCAAAGAAGATGCCCTAACTCCTAATTTCTA
TCACTAGCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGTTAGTTG
AACCAGCATTTCGACGTTGGGATCTTGTTGGCTAATAACCATCTCGGAGT
ATGCAGGCTACAAGACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAG
AAAGTATCAGTATTGCGAGCGTTGAATGCTACCATTATCCGTACTCCCAA
CGAAGCGGCATTCGACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCT
TGGAGAAAGAGCTTCCGAATGCGCACATTTTGGACCAGTATGGAAACGTG
AACAACCCACTCGCCCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACA
GACAGAAGGCCGGATCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAA
CGATTACTGGTATCTCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAA
GTCATTGCAGCAGATCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCT
GAACGACGAGCATCTGAACGAGCCTTACAAGGTCGAGGGTATCGGATATG
ATTTCATTCCCGAGGTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAG
ACCGCCGACAAAGAGTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGA
AGGTCTTCTGGTTGGTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGC
AAGCCGCGAAGGATAATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTC
CTGCCCGACAGCATCAGAAGTTACCTTACCAAGGTAAGTTAATCTATACT
TTTTGGCTGCTTCTAATGAGTCCTCTAACATATCACAGTTTGCCGATGAC
GACTGGCTCGCTGCGAATGGCCTTCTGTCGGCGACCCCTGAGCCCACATC
CTTCCCAGCGCTACAGCCGCAGGCGAAGAGCGATGCCTTCGCCGGCTCAC
AGGTCAAGGCTTTGAGGTTGAAGCCGATAACTACAGTCCGATCCAATATC
CCCTGTGAAATTGCCATCGAAATGATGCGCGACAGAGGTTTCGACCAGCT
GCCCGTTCTTGCTCCTTCCGGGAAGAAGCTTGTCGGACTGCTTACCCTTG
GAAATGTTCTCAGCCGGCTGACACATGGACGTGCTACCGGGAAGAGCCCA
GTTGCTGATGTCATGTTCGATTTCAGCAGGATTCCGGAAATTGTCACGGA
TCCCAGAGATATGGGGCTTGCCAGCTCGCAGGCCGGCCAGAACGGTAGTG
CTAACGCGAAGCCTCATATCAGAGATCGGAAATTTGTGGAGATTACCATG
GACACGCCTTTGAGCGTTCTCAACCGATTCCTTGAATGGAACAGTGCAGC
TGTTGTCACTGAGCGAGATGACCAAGGAGCAATGAAGCCGGTTGCGGTGG
CGACCAAGGTCGATCTCCTCACCTGGATGCTTCACAACGACAACAGTGGC
ACCTCAGGTAATTAAGATTATGATATTCTAGCGACTGTAACTTAGATTTT
CAACCGGTTTGCTATCGATTGGAGAGTATCAACTATTTCTCCAATTTTCA
TGATTTCTTTTATTTTCTAATTTTCATGGGTGGATGGATGCCCTCCGGCA
CGCAGCTCCGAGTCATCCAGTCATATAACGGGGGCTATGCAATGGGCGAG
ATGGAGTTACTTGGAGCAATCTAGATAATTCAGGTCAAATGAGCCTCCAA
TCGAACAATCCCAATAAGTTGGGGGATCTTGCTGTGTGTAGGGCTGACGT
ACGTAACTCACAGAAGCCCGGCATGACGTCTCGAGTCCGCTATCTTGTAA
CTATATTGAAATAGCAATGCATTCGAACTGTGCCC back to topCoding sequence (CDS) from alignment at ch3:2836571..2839105+ >KJC3_003739-T1 ID=KJC3_003739-T1|Name=KJC3_003739-T1|organism=Aspergillus niger KJC3|type=CDS|length=6396bp|location=Sequence derived from alignment at ch3:2836571..2839105+ (Aspergillus niger KJC3)
ATGTCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAAT
CACCCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGC
GCAGCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAAT
GCTGGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGC
GGAACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCA
GCGGTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTAC
AAGACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGT
ATTGCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCAT
TCGACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAG
CTTCCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACT
CGCCCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCC
GGATCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGT
ATCTCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGC
AGATCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGC
ATCTGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCC
GAGGTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAA
AGAGTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGG
TTGGTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAG
GATAATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAG
CATCAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGA
ATGGCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAG
CCGCAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAG
GTTGAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCA
TCGAAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCT
TCCGGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCG
GCTGACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGT
TCGATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGG
CTTGCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCA
TATCAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCG
TTCTCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGA
GATGACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCT
CCTCACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAAA
TGTCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAATC
ACCCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGCG
CAGCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAATG
CTGGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGCG
GAACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCAG
CGGTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTACA
AGACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGTA
TTGCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCATT
CGACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAGC
TTCCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACTC
GCCCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCCG
GATCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGTA
TCTCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGCA
GATCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGCA
TCTGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCCG
AGGTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAAA
GAGTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGGT
TGGTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAGG
ATAATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAGC
ATCAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGAA
TGGCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAGC
CGCAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAGG
TTGAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCAT
CGAAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCTT
CCGGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCGG
CTGACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGTT
CGATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGGC
TTGCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCAT
ATCAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCGT
TCTCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGAG
ATGACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCTC
CTCACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAAAT
GTCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAATCA
CCCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGCGC
AGCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAATGC
TGGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGCGG
AACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCAGC
GGTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTACAA
GACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGTAT
TGCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCATTC
GACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAGCT
TCCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACTCG
CCCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCCGG
ATCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGTAT
CTCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGCAG
ATCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGCAT
CTGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCCGA
GGTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAAAG
AGTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGGTT
GGTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAGGA
TAATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAGCA
TCAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGAAT
GGCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAGCC
GCAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAGGT
TGAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCATC
GAAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCTTC
CGGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCGGC
TGACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGTTC
GATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGGCT
TGCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCATA
TCAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCGTT
CTCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGAGA
TGACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCTCC
TCACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAAATG
TCCACGATAACCACCCCGGCCGGTCCTCCGGTGGCCCTTGATACAATCAC
CCAGAATATCGGCAATACTCCCTTGGTCAAGCTTAACAGGATTCCGCGCA
GCCTGGGAATCGAAGCCACCGTCTATGCCAAATGTGAATATTTCAATGCT
GGCGGGAGCGTGAAGGATCGTATCGCTTTGCGCATGATTGAAGAAGCGGA
ACGATCTGGGCGCATCAAGCCTGGCGATACTTTGATCGAACCTACCAGCG
GTAACACCGGTATTGGTCTAGCTCTCGTTGCGGCCGTCAAGGGCTACAAG
ACTATCATCACTCTGCCTGAAAAGATGTCTGCCGAGAAAGTATCAGTATT
GCGAGCGTTGAATGCTACCATTATCCGTACTCCCAACGAAGCGGCATTCG
ACTCTCCGGAATCCCACATTGGCGTCGCAAAGCGCTTGGAGAAAGAGCTT
CCGAATGCGCACATTTTGGACCAGTATGGAAACGTGAACAACCCACTCGC
CCACGAGCTTGGAACCGCGGAGGAAATTTGGGTACAGACAGAAGGCCGGA
TCAGTGCGGTTGTCGCCGGTGCTGGCACTGGTGGAACGATTACTGGTATC
TCTCGCGGCCTCAAGAAGCACAACCCCGATATCCAAGTCATTGCAGCAGA
TCCTCATGGGTCCATTTTGGCACTTCCTGCGGCGCTGAACGACGAGCATC
TGAACGAGCCTTACAAGGTCGAGGGTATCGGATATGATTTCATTCCCGAG
GTTCTGGATCGCCAGGCAGTTGATAAGTGGTACAAGACCGCCGACAAAGA
GTCGTTCCAATACTCTCGGCGGTTAATCGCCGAGGAAGGTCTTCTGGTTG
GTGGAAGCAGTGGAAGTGCCATCTCCGCTTTGGCGCAAGCCGCGAAGGAT
AATAGATTCAAGAAGGATGACGTGGTTGTCGTCGTCCTGCCCGACAGCAT
CAGAAGTTACCTTACCAAGTTTGCCGATGACGACTGGCTCGCTGCGAATG
GCCTTCTGTCGGCGACCCCTGAGCCCACATCCTTCCCAGCGCTACAGCCG
CAGGCGAAGAGCGATGCCTTCGCCGGCTCACAGGTCAAGGCTTTGAGGTT
GAAGCCGATAACTACAGTCCGATCCAATATCCCCTGTGAAATTGCCATCG
AAATGATGCGCGACAGAGGTTTCGACCAGCTGCCCGTTCTTGCTCCTTCC
GGGAAGAAGCTTGTCGGACTGCTTACCCTTGGAAATGTTCTCAGCCGGCT
GACACATGGACGTGCTACCGGGAAGAGCCCAGTTGCTGATGTCATGTTCG
ATTTCAGCAGGATTCCGGAAATTGTCACGGATCCCAGAGATATGGGGCTT
GCCAGCTCGCAGGCCGGCCAGAACGGTAGTGCTAACGCGAAGCCTCATAT
CAGAGATCGGAAATTTGTGGAGATTACCATGGACACGCCTTTGAGCGTTC
TCAACCGATTCCTTGAATGGAACAGTGCAGCTGTTGTCACTGAGCGAGAT
GACCAAGGAGCAATGAAGCCGGTTGCGGTGGCGACCAAGGTCGATCTCCT
CACCTGGATGCTTCACAACGACAACAGTGGCACCTCAGGTAATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004122 | cystathionine beta-synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006535 | cysteine biosynthetic process from serine |
| GO:0019343 | cysteine biosynthetic process via cystathionine |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003739-T1.utr5p1 | KJC3_003739-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003739-T1.utr3p1 | KJC3_003739-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001216 |
| DBxref | InterPro:IPR001926 |
| DBxref | InterPro:IPR036052 |
| DBxref | InterPro:IPR005857 |
| DBxref | InterPro:IPR000644 |
| DBxref | PFAM:PF00291 |
| DBxref | PFAM:PF00571 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch3 | supercontig | ch3:2836571..2839105 + |
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