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KJC3_003741-T1, KJC3_003741-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003741-T1
Unique NameKJC3_003741-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2840178..2842195-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003741-T1 ID=KJC3_003741-T1|Name=KJC3_003741-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2018bp|location=Sequence derived from alignment at ch3:2840178..2842195- (Aspergillus niger KJC3)
CTCCAGCAACCAACAAGCAACAACTTGGATGTCAGCCCGCTTCCGGACAG
GATTACAGCCCGCAGACTTGGTCTACTAATTGGCTGCGTCAGGACTGTTC
CTCTAACCAGACTGGGAGAAGACGAGGGACAAGAAGTTCTGCGCTCGCGG
ATTGGTAGCTTCTTGGATACATACTGCGGAACCTGGGCTCGACCTGTTCA
TGCCCTACACAATCCCTCTTCACTACTCCCCGGATAACTGAAAAACCCTT
CGTATCAATCCTGTTTATAGATTGATAAAATTCACCCACCATACTTCAGG
TGAGCATCTGTGAAAGATGCAATCTCACGGGAATTGGAAGACCCTTGAGG
GAATAGCTACCAGTCTGCTTGATGGCAGTCCCATTGCCATTGCGGTCACA
GTTTTCATTGCATTCGGGCTACCTATTCTGCTGCACTTGATCTTCTACCG
GACCGTCGCTTCTCCACCCTCCAGCAATTTCCTACTCCTTGGTCCCAGTG
GGGCTGGCAAGACCGCTCTCTTAAGCCTGGTATGTTCAATCTGACATGGC
CTCAATGCACATCACACAATCTTATCTAGCCTTGCTCTGTGCATTCCCCC
AAAGTGTAGCCTGTGCTAACAATCACTTTCCGTCTACAATAGCTCGAGAC
TAAATCGTCACGTGTTCCTCCCAAAGAGTCTCGGCTCACACATACTTCGC
AAACGTCAACTGTAGCTACCATCAGCCTTCCCGCCTCCATCCAGACTGCT
TCGAACCGCTACCGCTCTGTCAATGACACCTCCCTGAAGGATATTTCCAA
GAACCCCGTCAAGTACCGCTTATGGGATACTCCAGGCCATGGAAAACTGC
GGGGATCTCAGGGACTTGCGACATTGCTATCGATGTCAACATCCAAGGAT
GTAAAGTCCAAGTTGCGTGGAATCCTATTTATGGTCGACACGGCTGCTCT
TGTGGAGGCTGAAACATTGCGAGATACAGCTTCGTATCTGTATGATGTGC
TTTTAGCCCTCCAGAACCGGGCTCTTAAGAAGGGCAAGAATTCCGCGAAA
GCAGCCTCGGAGATCCCCGTTCTCGTGGTGGCCAACAAGCAAGACCTTTT
CACAGCCTTACCTCCAGGTTCCGTGCGTGAAAAGCTGGAGGCGGAGATTG
ACAGAATAAGGAAGTCCAAGAGCAAAGGTCTCATGGATGCTAGCGCTGAC
GCTGGAATTGATGAGGGCGAAGACGATATTCTGGGAAGTACTGACACTCG
GATTAAGTTCACCTTCAGAGGCCTAGAAGATGAAATTGGGCTGACTGTTG
ACATTGTCGGCGGCGCAGTCAAGAGTGATGAGGGCAACCTCGGGGCCGGC
GTCAGAAAGTGGGAGGAATGGATCGGTCAATGCCTCTGAACCGAATATTT
ATGTATGACTTGGGCCATTGACAGTGCTACTGGCCCCAGAGATGGGATGA
AACGATACAAGACATTTGTTAAAAATACAAACTCATACATACAATCCAGA
CAGTCCATACAAGCCCTATGCGCCGGCACGATCATCACGAGCAGAAACCG
GGAACCTTGGGATCATGATATACCTGAACTTTAGCCAAAAATATGCAATA
ACCTGCAAATTTTGACGGATACTTCTCGGAGGAGCTGCCGTCAGGACTCT
TCTTGCCCATGGCGGCCTAGATGCTCTATCACCTTGGTATCTATCCAATC
CAGTTACACAAGCAGGATTCTGAGGAGAAGAGTAAGGGACAGAGAGGGTG
AAATGTAAGGATATGGACCCAAAGGTCGCAGGCGAGAACCAGGTCATTTC
CAATGTCAGTCGTCCGCGTCTGGCTTGGCAGTAGGAATCTAGTATTGGCC
GCTAATACCATCGAGACGAATCCGATCGCTTGTAGCCAGATAGATGGCAG
TGGCGGCGCCGTCTTGGGTACTTTGCCCGATGATTGAAAAGATGTAAGGG
GACATTGCACCGAGAGTAAGTTCTACATACTCGTCCCAGGCCTTCCACTG
CTCTGTGACGATGTTCCC
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Coding sequence (CDS) from alignment at ch3:2840178..2842195-

>KJC3_003741-T1 ID=KJC3_003741-T1|Name=KJC3_003741-T1|organism=Aspergillus niger KJC3|type=CDS|length=1920bp|location=Sequence derived from alignment at ch3:2840178..2842195- (Aspergillus niger KJC3)
CTCGAGACTAAATCGTCACGTGTTCCTCCCAAAGAGTCTCGGCTCACACA
TACTTCGCAAACGTCAACTGTAGCTACCATCAGCCTTCCCGCCTCCATCC
AGACTGCTTCGAACCGCTACCGCTCTGTCAATGACACCTCCCTGAAGGAT
ATTTCCAAGAACCCCGTCAAGTACCGCTTATGGGATACTCCAGGCCATGG
AAAACTGCGGGGATCTCAGGGACTTGCGACATTGCTATCGATGTCAACAT
CCAAGGATGTAAAGTCCAAGTTGCGTGGAATCCTATTTATGGTCGACACG
GCTGCTCTTGTGGAGGCTGAAACATTGCGAGATACAGCTTCGTATCTGTA
TGATGTGCTTTTAGCCCTCCAGAACCGGGCTCTTAAGAAGGGCAAGAATT
CCGCGAAAGCAGCCTCGGAGATCCCCGTTCTCGTGGTGGCCAACAAGCAA
GACCTTTTCACAGCCTTACCTCCAGGTTCCGTGCGTGAAAAGCTGGAGGC
GGAGATTGACAGAATAAGGAAGTCCAAGAGCAAAGGTCTCATGGATGCTA
GCGCTGACGCTGGAATTGATGAGGGCGAAGACGATATTCTGGGAAGTACT
GACACTCGGATTAAGTTCACCTTCAGAGGCCTAGAAGATGAAATTGGGCT
GACTGTTGACATTGTCGGCGGCGCAGTCAAGAGTGATGAGGGCAACCTCG
GGGCCGGCGTCAGAAAGTGGGAGGAATGGATCGGTCAATGCCTCTGAATG
CAATCTCACGGGAATTGGAAGACCCTTGAGGGAATAGCTACCAGTCTGCT
TGATGGCAGTCCCATTGCCATTGCGGTCACAGTTTTCATTGCATTCGGGC
TACCTATTCTGCTGCACTTGATCTTCTACCGGACCGTCGCTTCTCCACCC
TCCAGCAATTTCCTACTCCTTGGTCCCAGTGGGGCTGGCAAGACCGCTCT
CTTAAGCCTGCTCGAGACTAAATCGTCACGTGTTCCTCCCAAAGAGTCTC
GGCTCACACATACTTCGCAAACGTCAACTGTAGCTACCATCAGCCTTCCC
GCCTCCATCCAGACTGCTTCGAACCGCTACCGCTCTGTCAATGACACCTC
CCTGAAGGATATTTCCAAGAACCCCGTCAAGTACCGCTTATGGGATACTC
CAGGCCATGGAAAACTGCGGGGATCTCAGGGACTTGCGACATTGCTATCG
ATGTCAACATCCAAGGATGTAAAGTCCAAGTTGCGTGGAATCCTATTTAT
GGTCGACACGGCTGCTCTTGTGGAGGCTGAAACATTGCGAGATACAGCTT
CGTATCTGTATGATGTGCTTTTAGCCCTCCAGAACCGGGCTCTTAAGAAG
GGCAAGAATTCCGCGAAAGCAGCCTCGGAGATCCCCGTTCTCGTGGTGGC
CAACAAGCAAGACCTTTTCACAGCCTTACCTCCAGGTTCCGTGCGTGAAA
AGCTGGAGGCGGAGATTGACAGAATAAGGAAGTCCAAGAGCAAAGGTCTC
ATGGATGCTAGCGCTGACGCTGGAATTGATGAGGGCGAAGACGATATTCT
GGGAAGTACTGACACTCGGATTAAGTTCACCTTCAGAGGCCTAGAAGATG
AAATTGGGCTGACTGTTGACATTGTCGGCGGCGCAGTCAAGAGTGATGAG
GGCAACCTCGGGGCCGGCGTCAGAAAGTGGGAGGAATGGATCGGTCAATG
CCTCTGAATGCAATCTCACGGGAATTGGAAGACCCTTGAGGGAATAGCTA
CCAGTCTGCTTGATGGCAGTCCCATTGCCATTGCGGTCACAGTTTTCATT
GCATTCGGGCTACCTATTCTGCTGCACTTGATCTTCTACCGGACCGTCGC
TTCTCCACCCTCCAGCAATTTCCTACTCCTTGGTCCCAGTGGGGCTGGCA
AGACCGCTCTCTTAAGCCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003741KJC3_003741Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003741-T1KJC3_003741-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003741-T1.cdsKJC3_003741-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003741-T1.utr3p2KJC3_003741-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_003741-T1.utr3p1KJC3_003741-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003741-T1.exon3KJC3_003741-T1.exon3Aspergillus niger KJC3exon
KJC3_003741-T1.exon2KJC3_003741-T1.exon2Aspergillus niger KJC3exon
KJC3_003741-T1.exon1KJC3_003741-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003741-T1.utr5p1KJC3_003741-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR019009
DBxrefPFAM:PF09439
DBxrefPFAM:PF01926
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2840178..2842195 -
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