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KJC3_003742-T1, KJC3_003742-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003742-T1
Unique NameKJC3_003742-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2844284..2845752+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003742-T1 ID=KJC3_003742-T1|Name=KJC3_003742-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1469bp|location=Sequence derived from alignment at ch3:2844284..2845752+ (Aspergillus niger KJC3)
ACAGCAGGCGTCCCAGCATGCCGTTGATTGCAGGGGGTGACGGGAGTGTG
TCAACAGACATCTTTGGCCATCTTCTTTCTCCGTCAAATACTACTTAACG
CCTGTTTTCGGTAGCATTGAAATTCCAATTTTCCCCCTTCTTCTATCTCT
TTCTCTCTTCCCATCTTCCCATGATGAGACTCGCGCGTACAGTATACTTA
GTGCTGTCACTTCTCTCAGCTGCTCTTGCGGATATCGAATTCATCGACCC
AGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTTTACTGCTCACTGGA
GGGATTCCGGCACATTACCCCGGCTTGCTTCACTCGTACAGTATGACCTC
TATCTTTGTGCAGGCGGAGACACAGTGGGATCCCATGTGCGTGCTCTGTC
AATATTCTCGCCCCTTAAGCAAACTCTACTAATACCCACGTCTTTGATAC
AGGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAGGGCAAC
TCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGCAATGATGCAAACGC
ATAGTAAGGCTTCTTCCATAGCTCCCATGAAACGCGACAGCAGGTTTCGA
CCTCAGCTGTAACGTCCCTTTCACTGCTGACAATTGCACCTCGTGCAGCT
TCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTCAACTACTCG
GATCGCTTCACCCTCACGAACATGACCGGATCATTCTCCCCGACGGTTAT
CAATGGAATCCCTTCCGCTATGTACCCTACAGACTCCTTTCCCCCGGCCC
ATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTGGCTGGACCC
TTTACGATTCCCTATCAGTTGCAGACTGGACCTACCAGATACGCACCCAT
GGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAACCCCCCAAT
ATCCAACGAGCGCGTATTCCGTTGCTACAACGTATCTACCTCAGGCTACT
GTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTTATTAGCATTGA
GAATACAGTAAGTATAGCGTGGCTGGGTTGTGTCACGATTGATTCTGTTC
TTCTCTTCTCAAAGCTTGCGAATCTGGGCTAATGGCACTTCATTTCACAG
GCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGCGGTTTTTGGA
AAGATGGAAAGATTGAGGCGTTTGACAATTCTGATCTGTAAGGTCTAGAT
GTTCATGGCCTATTGCCTGATCGTTACAAGGCTTCCTCCCTACTTAGCAT
GCTTTCATGATAGCCTGTATGGGGCGTTCCCGAGCTAGAACGGAGCTCGA
GAATATATGTTGCACCTAACGCCAGGCATTTCCCAACTATGTTTGTTTGC
ATCAATGTGGTTACTATTATACTGGACAATGCTGGCCTCTTGGAGTTTAT
CTTAATCAGCAAGCCTACT
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Coding sequence (CDS) from alignment at ch3:2844284..2845752+

>KJC3_003742-T1 ID=KJC3_003742-T1|Name=KJC3_003742-T1|organism=Aspergillus niger KJC3|type=CDS|length=3168bp|location=Sequence derived from alignment at ch3:2844284..2845752+ (Aspergillus niger KJC3)
ATGATGAGACTCGCGCGTACAGTATACTTAGTGCTGTCACTTCTCTCAGC
TGCTCTTGCGGATATCGAATTCATCGACCCAGCAGCCGGCACAGTCATCA
GAGCTGGGGATGAGTTTACTGCTCACTGGAGGGATTCCGGCACATTACCC
CGGCTTGCTTCACTCGTACAGTATGACCTCTATCTTTGTGCAGGCGGAGA
CACAGTGGGATCCCATGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTT
TTGCCAAGGGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGC
AATGATGCAAACGCATACTTCCTTAGGATTGCCGCTTCTGGTCCTGATGC
CTCTGTTGTCAACTACTCGGATCGCTTCACCCTCACGAACATGACCGGAT
CATTCTCCCCGACGGTTATCAATGGAATCCCTTCCGCTATGTACCCTACA
GACTCCTTTCCCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAA
GAGGCAGGTGGCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGAC
CTACCAGATACGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTG
GGAACACCAACCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAAC
GTATCTACCTCAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACAT
ACTCCGTTATTAGCATTGAGAATACAGCATCTCCAGCACCGCATGCCGGA
GACACAAAAATGAAGCGGTTTTTGGAAAGATGGAAAGATTGAATGATGAG
ACTCGCGCGTACAGTATACTTAGTGCTGTCACTTCTCTCAGCTGCTCTTG
CGGATATCGAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGG
GATGAGTTTACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGC
TTCACTCGTACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGG
GATCCCATGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAG
GGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGCAATGATGC
AAACGCATACTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTG
TCAACTACTCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCC
CCGACGGTTATCAATGGAATCCCTTCCGCTATGTACCCTACAGACTCCTT
TCCCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGG
TGGCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACCAGA
TACGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACC
AACCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAACGTATCTAC
CTCAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTT
ATTAGCATTGAGAATACAGCATCTCCAGCACCGCATGCCGGAGACACAAA
AATGAAGCGGTTTTTGGAAAGATGGAAAGATTGAATGATGAGACTCGCGC
GTACAGTATACTTAGTGCTGTCACTTCTCTCAGCTGCTCTTGCGGATATC
GAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTT
TACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCG
TACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCAT
GAGGACATAGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAGGGCAACTC
AGTTACGTTTAAGATTGATTCCGAGGTTGGCGGCAATGATGCAAACGCAT
ACTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTCAACTAC
TCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCCCCGACGGT
TATCAATGGAATCCCTTCCGCTATGTACCCTACAGACTCCTTTCCCCCGG
CCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTGGCTGGA
CCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACCAGATACGCACC
CATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAACCCCCC
AATATCCAACGAGCGCGTATTCCGTTGCTACAACGTATCTACCTCAGGCT
ACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTTATTAGCAT
TGAGAATACAGCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGC
GGTTTTTGGAAAGATGGAAAGATTGAATGATGAGACTCGCGCGTACAGTA
TACTTAGTGCTGTCACTTCTCTCAGCTGCTCTTGCGGATATCGAATTCAT
CGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTTTACTGCTC
ACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCGTACAGTAT
GACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCATGAGGACAT
AGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAGGGCAACTCAGTTACGT
TTAAGATTGATTCCGAGGTTGGCGGCAATGATGCAAACGCATACTTCCTT
AGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTCAACTACTCGGATCG
CTTCACCCTCACGAACATGACCGGATCATTCTCCCCGACGGTTATCAATG
GAATCCCTTCCGCTATGTACCCTACAGACTCCTTTCCCCCGGCCCATATG
GATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTGGCTGGACCCTTTAC
GATTCCCTATCAGTTGCAGACTGGACCTACCAGATACGCACCCATGGCTA
AGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAACCCCCCAATATCCA
ACGAGCGCGTATTCCGTTGCTACAACGTATCTACCTCAGGCTACTGTTCA
GATGACACTGTCCGCCTCAGAAACATACTCCGTTATTAGCATTGAGAATA
CAGCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGCGGTTTTTG
GAAAGATGGAAAGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006078(1->6)-beta-D-glucan biosynthetic process
GO:0042546cell wall biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003742KJC3_003742Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003742-T1KJC3_003742-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003742-T1.utr5p1KJC3_003742-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003742-T1.exon1KJC3_003742-T1.exon1Aspergillus niger KJC3exon
KJC3_003742-T1.exon2KJC3_003742-T1.exon2Aspergillus niger KJC3exon
KJC3_003742-T1.exon3KJC3_003742-T1.exon3Aspergillus niger KJC3exon
KJC3_003742-T1.exon4KJC3_003742-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003742-T1.cdsKJC3_003742-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003742-T1.utr3p1KJC3_003742-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR008659
DBxrefInterPro:IPR018466
DBxrefPFAM:PF05390
DBxrefPFAM:PF10342
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2844284..2845752 +
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