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KJC3_003753-T1, KJC3_003753-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003753-T1
Unique NameKJC3_003753-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2865665..2867781+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003753-T1 ID=KJC3_003753-T1|Name=KJC3_003753-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2117bp|location=Sequence derived from alignment at ch3:2865665..2867781+ (Aspergillus niger KJC3)
CGACAGTCTTTGTGCACCCTTGAACACAACAACGCCCCTTTGGCCTTATC
ATTGGCTTCATGTTGTCAAAGCCATACACTGTCCGGGATCTGCGTTTCGC
ATGCACCGAGGGCTGAAAGCATCATGTCTTGTCAGGAACTTGACAGTGAT
ACTATTCTCGATTCAACCTCAGCAAAAAAGCGCAACAATTCTGAAGCAAC
CGAGTATCCCCGAAGGCGCGCAACTATAGCGGTATGTTGGATCTCTTCCC
CTCTACAACCCTCACCAAGTACCACCCGGTGCCGTCACATTTCCTATCCC
CTGGTACTAGCTCTGCTACGAAAACAAGTAATACTAATGTGCGTGCGCTG
CTACAGTGCCAGATCTGTCGTCTACGGAAAACGAGATGTAACGGAGCCCG
CCCAAGATGCCAGCTCTGCGTAGACCTGGATGCAGATTGTGTCTATCGTG
AGCCGGGCATCAAACTAGATGCCGGTGACAAACTGATTATCGAAAAGCTG
AACAGAATAGAAGTCTTACTTCAGTCGAAGTTTGCAGACCCCATCGGCCA
GTCTCCCCTGTCATCGAATTCTTCCACGGCTGCCAACCTTGTCCAAATTA
GTAGCGATGATGCTGTCAGTCTCGCCAACATACCTACCAGGACAATCGCG
GTGGGTCTTGGATCATGGGCAAATCCACCGACAAGCATCTCAACTATGCC
CAGAGTACATACGACACCGGCTTTGCACCTTCTACAATGGCCTCTCATTC
GAGAACTGGTCGCTGTTCCTTATGATCCTCATACACTTCTACAGCTAGAA
ATGGCTCGTGAGCCACTTCGGCTCGAACCTCCTGTGAGCTTAGATTTATC
AAACGCACTTACTCACGCTCGACTTTTTTTCGAGCGCGTAAATGTTTGGT
ACGCTTGTGTCAACCCATTGACGTGGCCTCGCTATTACAAGATGGCTCTT
TCTCGGGACTTCGAGAGAGGGCCTGAAAGCTGCGTTGTACTCTTGGTTTT
GGCACTGGGCAGTGCCAGTCAATATGGAAGTATATCTTGCCTTTCCGCAG
ATGAGGAACTTCCAGGACTATCATATTTCTCCGCAGCTTGGACCCTTTTG
CCGGCTGTTATGACGCGCAATTCGGTGCTTGCAGCGCAATGTGTCATCTT
GGCATCTGCATATTTATTTTACATGGTCAGGCCCCTTGAGGCCTGGACGC
TACTATCAAATGCCAGCATGAAATTACAATTACTCTTAGGTAACCCCTCT
CGTGTTCCGGGGCAATGGAAGGAGCTGAGTACAAGAGTGTACTGGAACAC
CTTACTATTTGAAAGTGATTTGCTTGCCGAATTAGACCTACCACACTCGG
GGATTGTGCATTTTGAAGAGCTCGTCGATCTCCCTGGGGGCTTTGAACCG
GAAGATGAAGAAGATGAAGAAGACGAAGGAAGCATACGAATTGAAGAGAA
ACTAGTAGATGCGATGATAGGTCAGGATGAGCTCTGGTATTTCTTGGCTG
AAATTGCCCTAAGAAGGCTGCTCAACAGAGTCAGTCATATGATCTACCAA
AAAGACAGCATCTTGACACTCGCATCTCTCGGTCCTATCGCCTCAGAGCT
AGATTTCCAGCTGTCTCAATGGTATGAAAGCCTTCCTCAGCCTGTCCGGT
TTCCTCTATCTGGGGGCCCAACTTTAAGCCCCATTCAGACAGTTTTAAGG
CTTCGCTACTTTGCCTGCCGTACAATAATATATCGGCCTTACATCCTGGC
GGTCTTCCAGAATGAGTATGCATGCAGTGACCCGACAGTAAAAGACTGCT
GCCTGCGGTGCTTGGACGCGACATTGAATCAACTCGAGCATATAGACAGA
CATCGTGAAGGTCACCTGCCGTACCTCTGGCAAGGTGCCCTTTCCATGGT
CTCTCAGGCGTTGTTAATCATGGGGGCAACCATGTCACCGACTCTCTCAT
CGCTGTTGCCTCCAGCGACTCAGCTAGACGGTATCATATCTGGCGTCATA
ACGGAGGTTGGCAGATATGCGCGGCTTGCACCAAGTCTAAAGTTATCTGC
CGAGATCATTCGTGATGCGGAAAAGAGACGCCAGGTGTCCCTCGCGTCAG
CGGCCAGACGAGGTTGA
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Coding sequence (CDS) from alignment at ch3:2865665..2867781+

>KJC3_003753-T1 ID=KJC3_003753-T1|Name=KJC3_003753-T1|organism=Aspergillus niger KJC3|type=CDS|length=3738bp|location=Sequence derived from alignment at ch3:2865665..2867781+ (Aspergillus niger KJC3)
ATGTCTTGTCAGGAACTTGACAGTGATACTATTCTCGATTCAACCTCAGC
AAAAAAGCGCAACAATTCTGAAGCAACCGAGTATCCCCGAAGGCGCGCAA
CTATAGCGTGCCAGATCTGTCGTCTACGGAAAACGAGATGTAACGGAGCC
CGCCCAAGATGCCAGCTCTGCGTAGACCTGGATGCAGATTGTGTCTATCG
TGAGCCGGGCATCAAACTAGATGCCGGTGACAAACTGATTATCGAAAAGC
TGAACAGAATAGAAGTCTTACTTCAGTCGAAGTTTGCAGACCCCATCGGC
CAGTCTCCCCTGTCATCGAATTCTTCCACGGCTGCCAACCTTGTCCAAAT
TAGTAGCGATGATGCTGTCAGTCTCGCCAACATACCTACCAGGACAATCG
CGGTGGGTCTTGGATCATGGGCAAATCCACCGACAAGCATCTCAACTATG
CCCAGAGTACATACGACACCGGCTTTGCACCTTCTACAATGGCCTCTCAT
TCGAGAACTGGTCGCTGTTCCTTATGATCCTCATACACTTCTACAGCTAG
AAATGGCTCGTGAGCCACTTCGGCTCGAACCTCCTGTGAGCTTAGATTTA
TCAAACGCACTTACTCACGCTCGACTTTTTTTCGAGCGCGTAAATGTTTG
GTACGCTTGTGTCAACCCATTGACGTGGCCTCGCTATTACAAGATGGCTC
TTTCTCGGGACTTCGAGAGAGGGCCTGAAAGCTGCGTTGTACTCTTGGTT
TTGGCACTGGGCAGTGCCAGTCAATATGGAAGTATATCTTGCCTTTCCGC
AGATGAGGAACTTCCAGGACTATCATATTTCTCCGCAGCTTGGACCCTTT
TGCCGGCTGTTATGACGCGCAATTCGGTGCTTGCAGCGCAATGTGTCATC
TTGGCATCTGCATATTTATTTTACATGGTCAGGCCCCTTGAGGCCTGGAC
GCTACTATCAAATGCCAGCATGAAATTACAATTACTCTTAGGTAACCCCT
CTCGTGTTCCGGGGCAATGGAAGGAGCTGAGTACAAGAGTGTACTGGAAC
ACCTTACTATTTGAAAGTGATTTGCTTGCCGAATTAGACCTACCACACTC
GGGGATTGTGCATTTTGAAGAGCTCGTCGATCTCCCTGGGGGCTTTGAAC
CGGAAGATGAAGAAGATGAAGAAGACGAAGGAAGCATACGAATTGAAGAG
AAACTAGTAGATGCGATGATAGGTCAGGATGAGCTCTGGTATTTCTTGGC
TGAAATTGCCCTAAGAAGGCTGCTCAACAGAGTCAGTCATATGATCTACC
AAAAAGACAGCATCTTGACACTCGCATCTCTCGGTCCTATCGCCTCAGAG
CTAGATTTCCAGCTGTCTCAATGGTATGAAAGCCTTCCTCAGCCTGTCCG
GTTTCCTCTATCTGGGGGCCCAACTTTAAGCCCCATTCAGACAGTTTTAA
GGCTTCGCTACTTTGCCTGCCGTACAATAATATATCGGCCTTACATCCTG
GCGGTCTTCCAGAATGAGTATGCATGCAGTGACCCGACAGTAAAAGACTG
CTGCCTGCGGTGCTTGGACGCGACATTGAATCAACTCGAGCATATAGACA
GACATCGTGAAGGTCACCTGCCGTACCTCTGGCAAGGTGCCCTTTCCATG
GTCTCTCAGGCGTTGTTAATCATGGGGGCAACCATGTCACCGACTCTCTC
ATCGCTGTTGCCTCCAGCGACTCAGCTAGACGGTATCATATCTGGCGTCA
TAACGGAGGTTGGCAGATATGCGCGGCTTGCACCAAGTCTAAAGTTATCT
GCCGAGATCATTCGTGATGCGGAAAAGAGACGCCAGGTGTCCCTCGCGTC
AGCGGCCAGACGAGGTTGAATGTCTTGTCAGGAACTTGACAGTGATACTA
TTCTCGATTCAACCTCAGCAAAAAAGCGCAACAATTCTGAAGCAACCGAG
TATCCCCGAAGGCGCGCAACTATAGCGTGCCAGATCTGTCGTCTACGGAA
AACGAGATGTAACGGAGCCCGCCCAAGATGCCAGCTCTGCGTAGACCTGG
ATGCAGATTGTGTCTATCGTGAGCCGGGCATCAAACTAGATGCCGGTGAC
AAACTGATTATCGAAAAGCTGAACAGAATAGAAGTCTTACTTCAGTCGAA
GTTTGCAGACCCCATCGGCCAGTCTCCCCTGTCATCGAATTCTTCCACGG
CTGCCAACCTTGTCCAAATTAGTAGCGATGATGCTGTCAGTCTCGCCAAC
ATACCTACCAGGACAATCGCGGTGGGTCTTGGATCATGGGCAAATCCACC
GACAAGCATCTCAACTATGCCCAGAGTACATACGACACCGGCTTTGCACC
TTCTACAATGGCCTCTCATTCGAGAACTGGTCGCTGTTCCTTATGATCCT
CATACACTTCTACAGCTAGAAATGGCTCGTGAGCCACTTCGGCTCGAACC
TCCTGTGAGCTTAGATTTATCAAACGCACTTACTCACGCTCGACTTTTTT
TCGAGCGCGTAAATGTTTGGTACGCTTGTGTCAACCCATTGACGTGGCCT
CGCTATTACAAGATGGCTCTTTCTCGGGACTTCGAGAGAGGGCCTGAAAG
CTGCGTTGTACTCTTGGTTTTGGCACTGGGCAGTGCCAGTCAATATGGAA
GTATATCTTGCCTTTCCGCAGATGAGGAACTTCCAGGACTATCATATTTC
TCCGCAGCTTGGACCCTTTTGCCGGCTGTTATGACGCGCAATTCGGTGCT
TGCAGCGCAATGTGTCATCTTGGCATCTGCATATTTATTTTACATGGTCA
GGCCCCTTGAGGCCTGGACGCTACTATCAAATGCCAGCATGAAATTACAA
TTACTCTTAGGTAACCCCTCTCGTGTTCCGGGGCAATGGAAGGAGCTGAG
TACAAGAGTGTACTGGAACACCTTACTATTTGAAAGTGATTTGCTTGCCG
AATTAGACCTACCACACTCGGGGATTGTGCATTTTGAAGAGCTCGTCGAT
CTCCCTGGGGGCTTTGAACCGGAAGATGAAGAAGATGAAGAAGACGAAGG
AAGCATACGAATTGAAGAGAAACTAGTAGATGCGATGATAGGTCAGGATG
AGCTCTGGTATTTCTTGGCTGAAATTGCCCTAAGAAGGCTGCTCAACAGA
GTCAGTCATATGATCTACCAAAAAGACAGCATCTTGACACTCGCATCTCT
CGGTCCTATCGCCTCAGAGCTAGATTTCCAGCTGTCTCAATGGTATGAAA
GCCTTCCTCAGCCTGTCCGGTTTCCTCTATCTGGGGGCCCAACTTTAAGC
CCCATTCAGACAGTTTTAAGGCTTCGCTACTTTGCCTGCCGTACAATAAT
ATATCGGCCTTACATCCTGGCGGTCTTCCAGAATGAGTATGCATGCAGTG
ACCCGACAGTAAAAGACTGCTGCCTGCGGTGCTTGGACGCGACATTGAAT
CAACTCGAGCATATAGACAGACATCGTGAAGGTCACCTGCCGTACCTCTG
GCAAGGTGCCCTTTCCATGGTCTCTCAGGCGTTGTTAATCATGGGGGCAA
CCATGTCACCGACTCTCTCATCGCTGTTGCCTCCAGCGACTCAGCTAGAC
GGTATCATATCTGGCGTCATAACGGAGGTTGGCAGATATGCGCGGCTTGC
ACCAAGTCTAAAGTTATCTGCCGAGATCATTCGTGATGCGGAAAAGAGAC
GCCAGGTGTCCCTCGCGTCAGCGGCCAGACGAGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003753KJC3_003753Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003753-T1.utr5p1KJC3_003753-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003753-T1.exon1KJC3_003753-T1.exon1Aspergillus niger KJC3exon
KJC3_003753-T1.exon2KJC3_003753-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003753-T1.cdsKJC3_003753-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003753-T1KJC3_003753-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2865665..2867781 +
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