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KJC3_003755-T1, KJC3_003755-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003755-T1
Unique NameKJC3_003755-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2874752..2875756-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003755-T1 ID=KJC3_003755-T1|Name=KJC3_003755-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1005bp|location=Sequence derived from alignment at ch3:2874752..2875756- (Aspergillus niger KJC3)
GAAAAGCTCGTCCACAATGAGCTTGCAAGAGAGAAATTATTGACGCATCC
GTGTCTTTCTAAATACATACAGCGGTAAAACTACGTTCGCCCCTTTCGGT
TTATCGGCCCCTTTCCTTGGCGGCAGACGTAGTTATGTCTTTCAGGGCCA
GAAAGCGCGTACCAGACTCTGAGAGTGATTTCGTCGACGGCTATCGGTCA
TCAAAAAGGACAAGGGGAGATGTCTCGAAGGAAAACACAGACTCTCGTCA
TTCTGATTCAGTTGCTGGCCAGGGGAAGCTTGACTCGAATGGAGACCTTT
ATTGGGAAATCTCCAAAGCACGCCGTGTGACCATCTCATCTTTCCGTGGA
AAGACCTTGGTCAATATAAGGGAATATTACGAGAAGGATGGCCACGAGCT
CCCTGGGAAGAAGGTTGGTTCCCTTTTTATACTAAAAGGCTTTGCTACGA
AACTCATCGTTTGCGCAGGGGATCTCTTTGCCAATTGATCAGTTTTCCTC
TCTTGTGAGCTTACTACCTCATATTGAAACCACTCTTCAGGATAAAGGAG
AATCAATCCCCCGGCCACAGTATGATAGTGACAGTAAAATCAACAGTGAG
AATAAAGAGGCCGGTGATGACTCCGTTGATGTTTCGGATGAGGATACGCG
CCGGAATATCGAAGCGACAAGTGAGGACGATAGCGAGTAGGCTTGCCCAC
TAAAGGGGCTAGAACTACCTTGAGGCAGACGGTCTGGTTTATTCAACAAC
GCCATCGCTGCTTATCTATCCCTGGGTTCCACTGGCGCTGCATTATAATG
GGAATGAATGGATCGGTTGGATTTATTATGAGCAGGTATGCAAGGCGTCG
AATATGCCATGAAACTCGCTCCAAACCACGAGAGTACGTATACAAGGTTT
TTAAATCGCTTCCCAAATGTCCTGTAGCTTTCAAGTATATCCAGCTAGTC
CCTCTGATTTCCAGTTGAAATTCTACCAGAAGTCTAGTACAAAATGTCAT
TTAAC
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Coding sequence (CDS) from alignment at ch3:2874752..2875756-

>KJC3_003755-T1 ID=KJC3_003755-T1|Name=KJC3_003755-T1|organism=Aspergillus niger KJC3|type=CDS|length=1002bp|location=Sequence derived from alignment at ch3:2874752..2875756- (Aspergillus niger KJC3)
GGGATCTCTTTGCCAATTGATCAGTTTTCCTCTCTTGTGAGCTTACTACC
TCATATTGAAACCACTCTTCAGGATAAAGGAGAATCAATCCCCCGGCCAC
AGTATGATAGTGACAGTAAAATCAACAGTGAGAATAAAGAGGCCGGTGAT
GACTCCGTTGATGTTTCGGATGAGGATACGCGCCGGAATATCGAAGCGAC
AAGTGAGGACGATAGCGAGTAGATGTCTTTCAGGGCCAGAAAGCGCGTAC
CAGACTCTGAGAGTGATTTCGTCGACGGCTATCGGTCATCAAAAAGGACA
AGGGGAGATGTCTCGAAGGAAAACACAGACTCTCGTCATTCTGATTCAGT
TGCTGGCCAGGGGAAGCTTGACTCGAATGGAGACCTTTATTGGGAAATCT
CCAAAGCACGCCGTGTGACCATCTCATCTTTCCGTGGAAAGACCTTGGTC
AATATAAGGGAATATTACGAGAAGGATGGCCACGAGCTCCCTGGGAAGAA
GGGGATCTCTTTGCCAATTGATCAGTTTTCCTCTCTTGTGAGCTTACTAC
CTCATATTGAAACCACTCTTCAGGATAAAGGAGAATCAATCCCCCGGCCA
CAGTATGATAGTGACAGTAAAATCAACAGTGAGAATAAAGAGGCCGGTGA
TGACTCCGTTGATGTTTCGGATGAGGATACGCGCCGGAATATCGAAGCGA
CAAGTGAGGACGATAGCGAGTAGATGTCTTTCAGGGCCAGAAAGCGCGTA
CCAGACTCTGAGAGTGATTTCGTCGACGGCTATCGGTCATCAAAAAGGAC
AAGGGGAGATGTCTCGAAGGAAAACACAGACTCTCGTCATTCTGATTCAG
TTGCTGGCCAGGGGAAGCTTGACTCGAATGGAGACCTTTATTGGGAAATC
TCCAAAGCACGCCGTGTGACCATCTCATCTTTCCGTGGAAAGACCTTGGT
CAATATAAGGGAATATTACGAGAAGGATGGCCACGAGCTCCCTGGGAAGA
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003755KJC3_003755Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003755-T1KJC3_003755-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003755-T1.cdsKJC3_003755-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003755-T1.utr3p1KJC3_003755-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003755-T1.exon2KJC3_003755-T1.exon2Aspergillus niger KJC3exon
KJC3_003755-T1.exon1KJC3_003755-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003755-T1.utr5p1KJC3_003755-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003173
DBxrefInterPro:IPR009044
DBxrefPFAM:PF02229
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2874752..2875756 -
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