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KJC3_003758-T1, KJC3_003758-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003758-T1
Unique NameKJC3_003758-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2881498..2882814+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003758-T1 ID=KJC3_003758-T1|Name=KJC3_003758-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1317bp|location=Sequence derived from alignment at ch3:2881498..2882814+ (Aspergillus niger KJC3)
TACAAACTTAGCTGTAGTTCCTGAATTGTCTCTGACTTCCTTACATCCTG
CCCATTCTTGCTTCACTCGCATCCACACCACCCATTGTTGATTTGCCTAC
ACAGTCCAGCATACAACCTTACAACCTCACTGGCTAACACACAATGTCTC
GACCTGGTACTACGCTTTATGTCACCGGCTTCGGGCACGGGACACGAGCT
CGCGACCTTGCCTACGAATTCGAACGGTACGTGCCGCTCATCGATTGCTA
CGCGCTACCATGACTATACGACCCGTGTCCATTCTCGCAATTCACCTCGG
CTGAGTCCCGCAAACCGACGTCGGTGCCGCTCTCTATATCATATTGTGAT
AGAGATTTGCTTGTTTAATCCGATTTCCTTGGAGAGGGGACTCCTTGAAG
GGGGATCCTCCGAAAGAGATTTCCTCTCACAGTTGCCTTGCACCATATAT
TTAATGATTGAAATGCATGTGGATCGTCTTCTAACATTGACTTAGATATG
GACGTCTTGTCCGCTGTGACATCCCAGCGCCACGTACCCCTTCCAGCAGA
CTGTATGTTAAATCGAGGCTTCACACCCTAAATGTTACTTGCTCATGACA
TAAGGTTTGCCTTTGTGGAGTACGAGAGCCGCCGTGACGCAGATGATGCA
TACCATGAAATGCATAACAAGCGAATTGGCCGCGATGATTTGTTGAAAAT
TGAGGTAAGTAGAAGACTCGGATTTCATAACTTGACTGACATGGCCAAAG
TGGGCACGTACTCCTCCATCTGCTTCTTGGCGTTTCGATTCTGGTCGGGA
CCGGCGACGTGACCGTACTCCGCCACGACGTGGCCGCTCTCCTTCCCCTA
GACGTGGTCGTGGCGACTATTCTCCCCGAAGGGACGACAGGTACGACCGG
GATTATGACCGACATGACCGCGACTATGACCGCCGCGATCGCGACTATGA
CCGCCGTGACCGCGACTATGATCGCCGCGATCGGGACCGTGAACGTTCTC
GTGACCGCTCTCGAAGCCCTGATGAGAGGGATCGCGATATCAAGGATGAA
AGAGAGCGCCGTGATGACGATCGTGAACGACGCGAGGACGAGCGGGAGAA
TATCCCAAACGGTGAAGACAGGAAAGGTTTGCTCTTTGATACATGTACCC
ACTCCTAGTCGGTGCTGATCATCTGCCGCAGTCCCCTTAGAACCCTTGAC
CTCAGCTCATGATGAGCTTGATACAGCCGAGTAGGTTATTTTGGCTTCAT
GAACTATCAGATCTCGTACCATGCACCCGGCCAAAGACGTCAATCTGTGC
CGGATCGTATTCCAAGG
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Coding sequence (CDS) from alignment at ch3:2881498..2882814+

>KJC3_003758-T1 ID=KJC3_003758-T1|Name=KJC3_003758-T1|organism=Aspergillus niger KJC3|type=CDS|length=3345bp|location=Sequence derived from alignment at ch3:2881498..2882814+ (Aspergillus niger KJC3)
ATGTCTCGACCTGGTACTACGCTTTATGTCACCGGCTTCGGGCACGGGAC
ACGAGCTCGCGACCTTGCCTACGAATTCGAACGATATGGACGTCTTGTCC
GCTGTGACATCCCAGCGCCACGTACCCCTTCCAGCAGACTGTTTGCCTTT
GTGGAGTACGAGAGCCGCCGTGACGCAGATGATGCATACCATGAAATGCA
TAACAAGCGAATTGGCCGCGATGATTTGTTGAAAATTGAGTGGGCACGTA
CTCCTCCATCTGCTTCTTGGCGTTTCGATTCTGGTCGGGACCGGCGACGT
GACCGTACTCCGCCACGACGTGGCCGCTCTCCTTCCCCTAGACGTGGTCG
TGGCGACTATTCTCCCCGAAGGGACGACAGGTACGACCGGGATTATGACC
GACATGACCGCGACTATGACCGCCGCGATCGCGACTATGACCGCCGTGAC
CGCGACTATGATCGCCGCGATCGGGACCGTGAACGTTCTCGTGACCGCTC
TCGAAGCCCTGATGAGAGGGATCGCGATATCAAGGATGAAAGAGAGCGCC
GTGATGACGATCGTGAACGACGCGAGGACGAGCGGGAGAATATCCCAAAC
GGTGAAGACAGGAAAGTCCCCTTAGAACCCTTGACCTCAGCTCATGATGA
GCTTGATACAGCCGAGTAGATGTCTCGACCTGGTACTACGCTTTATGTCA
CCGGCTTCGGGCACGGGACACGAGCTCGCGACCTTGCCTACGAATTCGAA
CGATATGGACGTCTTGTCCGCTGTGACATCCCAGCGCCACGTACCCCTTC
CAGCAGACTGTTTGCCTTTGTGGAGTACGAGAGCCGCCGTGACGCAGATG
ATGCATACCATGAAATGCATAACAAGCGAATTGGCCGCGATGATTTGTTG
AAAATTGAGTGGGCACGTACTCCTCCATCTGCTTCTTGGCGTTTCGATTC
TGGTCGGGACCGGCGACGTGACCGTACTCCGCCACGACGTGGCCGCTCTC
CTTCCCCTAGACGTGGTCGTGGCGACTATTCTCCCCGAAGGGACGACAGG
TACGACCGGGATTATGACCGACATGACCGCGACTATGACCGCCGCGATCG
CGACTATGACCGCCGTGACCGCGACTATGATCGCCGCGATCGGGACCGTG
AACGTTCTCGTGACCGCTCTCGAAGCCCTGATGAGAGGGATCGCGATATC
AAGGATGAAAGAGAGCGCCGTGATGACGATCGTGAACGACGCGAGGACGA
GCGGGAGAATATCCCAAACGGTGAAGACAGGAAAGTCCCCTTAGAACCCT
TGACCTCAGCTCATGATGAGCTTGATACAGCCGAGTAGATGTCTCGACCT
GGTACTACGCTTTATGTCACCGGCTTCGGGCACGGGACACGAGCTCGCGA
CCTTGCCTACGAATTCGAACGATATGGACGTCTTGTCCGCTGTGACATCC
CAGCGCCACGTACCCCTTCCAGCAGACTGTTTGCCTTTGTGGAGTACGAG
AGCCGCCGTGACGCAGATGATGCATACCATGAAATGCATAACAAGCGAAT
TGGCCGCGATGATTTGTTGAAAATTGAGTGGGCACGTACTCCTCCATCTG
CTTCTTGGCGTTTCGATTCTGGTCGGGACCGGCGACGTGACCGTACTCCG
CCACGACGTGGCCGCTCTCCTTCCCCTAGACGTGGTCGTGGCGACTATTC
TCCCCGAAGGGACGACAGGTACGACCGGGATTATGACCGACATGACCGCG
ACTATGACCGCCGCGATCGCGACTATGACCGCCGTGACCGCGACTATGAT
CGCCGCGATCGGGACCGTGAACGTTCTCGTGACCGCTCTCGAAGCCCTGA
TGAGAGGGATCGCGATATCAAGGATGAAAGAGAGCGCCGTGATGACGATC
GTGAACGACGCGAGGACGAGCGGGAGAATATCCCAAACGGTGAAGACAGG
AAAGTCCCCTTAGAACCCTTGACCTCAGCTCATGATGAGCTTGATACAGC
CGAGTAGATGTCTCGACCTGGTACTACGCTTTATGTCACCGGCTTCGGGC
ACGGGACACGAGCTCGCGACCTTGCCTACGAATTCGAACGATATGGACGT
CTTGTCCGCTGTGACATCCCAGCGCCACGTACCCCTTCCAGCAGACTGTT
TGCCTTTGTGGAGTACGAGAGCCGCCGTGACGCAGATGATGCATACCATG
AAATGCATAACAAGCGAATTGGCCGCGATGATTTGTTGAAAATTGAGTGG
GCACGTACTCCTCCATCTGCTTCTTGGCGTTTCGATTCTGGTCGGGACCG
GCGACGTGACCGTACTCCGCCACGACGTGGCCGCTCTCCTTCCCCTAGAC
GTGGTCGTGGCGACTATTCTCCCCGAAGGGACGACAGGTACGACCGGGAT
TATGACCGACATGACCGCGACTATGACCGCCGCGATCGCGACTATGACCG
CCGTGACCGCGACTATGATCGCCGCGATCGGGACCGTGAACGTTCTCGTG
ACCGCTCTCGAAGCCCTGATGAGAGGGATCGCGATATCAAGGATGAAAGA
GAGCGCCGTGATGACGATCGTGAACGACGCGAGGACGAGCGGGAGAATAT
CCCAAACGGTGAAGACAGGAAAGTCCCCTTAGAACCCTTGACCTCAGCTC
ATGATGAGCTTGATACAGCCGAGTAGATGTCTCGACCTGGTACTACGCTT
TATGTCACCGGCTTCGGGCACGGGACACGAGCTCGCGACCTTGCCTACGA
ATTCGAACGATATGGACGTCTTGTCCGCTGTGACATCCCAGCGCCACGTA
CCCCTTCCAGCAGACTGTTTGCCTTTGTGGAGTACGAGAGCCGCCGTGAC
GCAGATGATGCATACCATGAAATGCATAACAAGCGAATTGGCCGCGATGA
TTTGTTGAAAATTGAGTGGGCACGTACTCCTCCATCTGCTTCTTGGCGTT
TCGATTCTGGTCGGGACCGGCGACGTGACCGTACTCCGCCACGACGTGGC
CGCTCTCCTTCCCCTAGACGTGGTCGTGGCGACTATTCTCCCCGAAGGGA
CGACAGGTACGACCGGGATTATGACCGACATGACCGCGACTATGACCGCC
GCGATCGCGACTATGACCGCCGTGACCGCGACTATGATCGCCGCGATCGG
GACCGTGAACGTTCTCGTGACCGCTCTCGAAGCCCTGATGAGAGGGATCG
CGATATCAAGGATGAAAGAGAGCGCCGTGATGACGATCGTGAACGACGCG
AGGACGAGCGGGAGAATATCCCAAACGGTGAAGACAGGAAAGTCCCCTTA
GAACCCTTGACCTCAGCTCATGATGAGCTTGATACAGCCGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003758KJC3_003758Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003758-T1KJC3_003758-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003758-T1.utr5p1KJC3_003758-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003758-T1.exon1KJC3_003758-T1.exon1Aspergillus niger KJC3exon
KJC3_003758-T1.exon2KJC3_003758-T1.exon2Aspergillus niger KJC3exon
KJC3_003758-T1.exon3KJC3_003758-T1.exon3Aspergillus niger KJC3exon
KJC3_003758-T1.exon4KJC3_003758-T1.exon4Aspergillus niger KJC3exon
KJC3_003758-T1.exon5KJC3_003758-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003758-T1.cdsKJC3_003758-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003758-T1.utr3p1KJC3_003758-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034403
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2881498..2882814 +
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