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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2894860..2895911- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003763-T1 ID=KJC3_003763-T1|Name=KJC3_003763-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1052bp|location=Sequence derived from alignment at ch3:2894860..2895911- (Aspergillus niger KJC3)
GTGCGATAGCCAGTCAACTTTCAGGTGTCCCATCAATAACAGCAGCCATG
GGTATGTTCAAATCGACGTGGTGATATATTCATTTGCTGAAGAATCTCGC
GGGTTGCGACTTTTTTTTTTTGGCTCAACACCATGGACATTTCCTGTTTT
CACTTGGCAAATACTGATTTTGGGATACAGGTATCGACTTGGACCGCCAC
CATGTGCGCGGCACCCATCGCAAGGCGCCCAAGAGCGAGAACGTCTACCT
GCAAGTCTTGGTGAAGCTCTACCGATTCCTCGCCCGTATGTCTCCGTCTT
CTGAGTGCAGCCGATTTCAGCAATGGGAAACTGATTGGTGGTGGTATTTT
TACAGGTCGTACGGAATCCAACTTCAACAAGGTCGTCTTGCGCCGCCTTT
TCATGTCCAGGATCAATCGCCCCCCCGTTTCGCTCTCGCGCATTGTATCC
AATGTGACCGACTCCCACAAGGGCAAGACTATCGTTGTGATCGGCACCAT
CACTGACGACAACCGTCTTCTGACTGTCCCGAAGCTGTCTATTGCAGCAC
TTCGTTTCACGGCTACTGCTCGGGCCAGGATTGAGAAGGCTGGTGGTGAG
GTCTTGACTTTGGACCAGCTCGCTCTGCGTGCCCCTACTGGAGCAAACAC
TCTCCTTCTCCGCGGACCTAAGAATGCTCGGGAGGCAGTGAAGCACTTCG
GTTTCGGCCCCCACAGCCACAAGGCATGTTATATACTCTTCGCGCAATAT
ATGGTTTGCATAACTAACCTTGAAACAGAAACCCTACGTTCGCAGCAAGG
GACGTAAGTTCGAGAGAGCCCGTGGACGCAGAAGGTCTCGCGGTTTCAAG
GTGTAAGGAACGCTGGTTAAATATTTTCCGTTTCTTGTGTCTGGTAGCGG
TTCATCGTGCTGGTGAAGACGACTTGCGGAATCATGCATACCCGGGAGTC
TTCCTTATCGGCCGTTGCTCCAACTTTTTTAGAACGCCCGATGCCAGACC
AAATATTATGAGGGTTCCAGGCGAGCTTAACTGGATGAAAATGAAAATGG
AG back to topCoding sequence (CDS) from alignment at ch3:2894860..2895911- >KJC3_003763-T1 ID=KJC3_003763-T1|Name=KJC3_003763-T1|organism=Aspergillus niger KJC3|type=CDS|length=798bp|location=Sequence derived from alignment at ch3:2894860..2895911- (Aspergillus niger KJC3)
AAACCCTACGTTCGCAGCAAGGGACGTAAGTTCGAGAGAGCCCGTGGACG
CAGAAGGTCTCGCGGTTTCAAGGTGTAAATGTCCAGGATCAATCGCCCCC
CCGTTTCGCTCTCGCGCATTGTATCCAATGTGACCGACTCCCACAAGGGC
AAGACTATCGTTGTGATCGGCACCATCACTGACGACAACCGTCTTCTGAC
TGTCCCGAAGCTGTCTATTGCAGCACTTCGTTTCACGGCTACTGCTCGGG
CCAGGATTGAGAAGGCTGGTGGTGAGGTCTTGACTTTGGACCAGCTCGCT
CTGCGTGCCCCTACTGGAGCAAACACTCTCCTTCTCCGCGGACCTAAGAA
TGCTCGGGAGGCAGTGAAGCACTTCGGTTTCGGCCCCCACAGCCACAAGA
AACCCTACGTTCGCAGCAAGGGACGTAAGTTCGAGAGAGCCCGTGGACGC
AGAAGGTCTCGCGGTTTCAAGGTGTAAATGTCCAGGATCAATCGCCCCCC
CGTTTCGCTCTCGCGCATTGTATCCAATGTGACCGACTCCCACAAGGGCA
AGACTATCGTTGTGATCGGCACCATCACTGACGACAACCGTCTTCTGACT
GTCCCGAAGCTGTCTATTGCAGCACTTCGTTTCACGGCTACTGCTCGGGC
CAGGATTGAGAAGGCTGGTGGTGAGGTCTTGACTTTGGACCAGCTCGCTC
TGCGTGCCCCTACTGGAGCAAACACTCTCCTTCTCCGCGGACCTAAGAAT
GCTCGGGAGGCAGTGAAGCACTTCGGTTTCGGCCCCCACAGCCACAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003763-T1.utr3p1 | KJC3_003763-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036227 |
| DBxref | InterPro:IPR021131 |
| DBxref | PFAM:PF17135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2894860..2895911 - |
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