You are here

Home

KJC3_003771-T1, KJC3_003771-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003771-T1
Unique NameKJC3_003771-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2997800..2999353+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003771-T1 ID=KJC3_003771-T1|Name=KJC3_003771-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1554bp|location=Sequence derived from alignment at ch3:2997800..2999353+ (Aspergillus niger KJC3)
CATCGAAGCACAATCACCTGTTGGGCGCTTTCTATCTCCATGATCGGTCT
CTTACTTCATAGAGTTCACTAGGTCACTATACTCTACGACTTTGACCCTT
AACTCTTGGGGTAAATTGGCTGGCTTGCTTCTAACTAGTCTGTCGCGTCA
CAACACCCCGCTATCGCGCTTGTTGGGAACGTCTTTTCATCCTTTGCCAG
ACGAGTCTGTAAAAGTGCTGTTGCGCACGTCTTATATCTAAGTACAAGTG
ACTGGGCTAGTCATTTAATCATGGAACAAACTGCACAAACCCCTGGAACA
CAGCAGGGCAGGCAGCAGCCTGTGTACGACACCAGAAATGGCGGGCATTA
TGGTAAATATTCATCGAAATCCCCTACACGTGTTAATATCTACACACATA
CGCACACACATATACACGTGAAAATCCACGTTGACGGCTGATGGCATGTC
TCTAGGTGCTAGCGCAGCGGTATGGTCGCCTTCGAAGCTTACGAGTACGC
CTACGTTCTTAAAGCTAACATGCTATATCCGTCTAGCTTTCTGCGCAAGG
CTATGCGCCTGTTGCTGAGCTCTATACCGGGACATGGGCGAATGTGAGTT
TTATATATTGGTAGAGAATAGATAGTGACTGACATTTCATCAGGTCAACC
AAGGCCTGCAGGGAACCGCCCGCGATATACTTACAACATATTGGCAGCAC
ATCATCAACCATCTAGAGTCGGACAACCATGATTACAAGATACACCAACT
ACCACTGGCTCGCATCAAAAAGGTCATGAAGGCTGACCCAGAGGTTAAAA
TGATATCAGCGGAAGCACCAATACTTTTTGCCAAAGGCTGTGATATCTTT
ATCACTGAACTGACCATGCGGGCATGGATTCATGCCGAGGACAACAAGCG
GCGTACGCTACAGAGGTCTGATATTGCAGCAGCACTATCAAAATCTGACA
TGTTTGATTTCCTCATTGACATAGTACCTCGCGAGGAGGCCACGTCCCAT
GCAAAGCGGTCTAGCCAGACAGCTGGAGCTTCTGCAGGCGTCCCCGGCCC
TGCAGGAGCCACCGGCCAACTGCCACCATCCCAACACGGTGTTCCCCACC
ACATGCCTCCGCCGGACTATAGTACCCTCGGTCAGCATGGGCTCCAAGAT
CAAGAATATCGGCCGCCAACGATGTATGCTGGAGCTGTGCAGTCTGACCC
GACGGCTGCTTATGGTCAGCATCAGCCTCAGATGTTTGAAGGAATGTATG
CAGCGTATCCGCATCTACCACCCCAGCAGGTATGTTCAAGCATATTATTA
CGAGAACCCCACTCCCCTTCTCGTTCCTTTCCTTTCCATGTACTACTAGT
TGTCCTCTATATTTTGACGTTGGCTAATGCACCGGACACCAATCAGTGAG
TGGTGACGGCACTCAGAGCCAGGTACAACCTGAGCGGCACACTAAGATTA
TACGTACAACGGCACCATGCCATGGTTTCGGTTACCCCGGTAAAGGAAGT
GGCCGGCTATGTACTGTGTAGCAACAGCTGTGTTGCAGATTTACGGAGTT
ATCG
back to top

Coding sequence (CDS) from alignment at ch3:2997800..2999353+

>KJC3_003771-T1 ID=KJC3_003771-T1|Name=KJC3_003771-T1|organism=Aspergillus niger KJC3|type=CDS|length=3960bp|location=Sequence derived from alignment at ch3:2997800..2999353+ (Aspergillus niger KJC3)
ATGGAACAAACTGCACAAACCCCTGGAACACAGCAGGGCAGGCAGCAGCC
TGTGTACGACACCAGAAATGGCGGGCATTATGGTGCTAGCGCAGCGCTTT
CTGCGCAAGGCTATGCGCCTGTTGCTGAGCTCTATACCGGGACATGGGCG
AATGTCAACCAAGGCCTGCAGGGAACCGCCCGCGATATACTTACAACATA
TTGGCAGCACATCATCAACCATCTAGAGTCGGACAACCATGATTACAAGA
TACACCAACTACCACTGGCTCGCATCAAAAAGGTCATGAAGGCTGACCCA
GAGGTTAAAATGATATCAGCGGAAGCACCAATACTTTTTGCCAAAGGCTG
TGATATCTTTATCACTGAACTGACCATGCGGGCATGGATTCATGCCGAGG
ACAACAAGCGGCGTACGCTACAGAGGTCTGATATTGCAGCAGCACTATCA
AAATCTGACATGTTTGATTTCCTCATTGACATAGTACCTCGCGAGGAGGC
CACGTCCCATGCAAAGCGGTCTAGCCAGACAGCTGGAGCTTCTGCAGGCG
TCCCCGGCCCTGCAGGAGCCACCGGCCAACTGCCACCATCCCAACACGGT
GTTCCCCACCACATGCCTCCGCCGGACTATAGTACCCTCGGTCAGCATGG
GCTCCAAGATCAAGAATATCGGCCGCCAACGATGTATGCTGGAGCTGTGC
AGTCTGACCCGACGGCTGCTTATGGTCAGCATCAGCCTCAGATGTTTGAA
GGAATGTATGCAGCGTATCCGCATCTACCACCCCAGCAGTGAATGGAACA
AACTGCACAAACCCCTGGAACACAGCAGGGCAGGCAGCAGCCTGTGTACG
ACACCAGAAATGGCGGGCATTATGGTGCTAGCGCAGCGCTTTCTGCGCAA
GGCTATGCGCCTGTTGCTGAGCTCTATACCGGGACATGGGCGAATGTCAA
CCAAGGCCTGCAGGGAACCGCCCGCGATATACTTACAACATATTGGCAGC
ACATCATCAACCATCTAGAGTCGGACAACCATGATTACAAGATACACCAA
CTACCACTGGCTCGCATCAAAAAGGTCATGAAGGCTGACCCAGAGGTTAA
AATGATATCAGCGGAAGCACCAATACTTTTTGCCAAAGGCTGTGATATCT
TTATCACTGAACTGACCATGCGGGCATGGATTCATGCCGAGGACAACAAG
CGGCGTACGCTACAGAGGTCTGATATTGCAGCAGCACTATCAAAATCTGA
CATGTTTGATTTCCTCATTGACATAGTACCTCGCGAGGAGGCCACGTCCC
ATGCAAAGCGGTCTAGCCAGACAGCTGGAGCTTCTGCAGGCGTCCCCGGC
CCTGCAGGAGCCACCGGCCAACTGCCACCATCCCAACACGGTGTTCCCCA
CCACATGCCTCCGCCGGACTATAGTACCCTCGGTCAGCATGGGCTCCAAG
ATCAAGAATATCGGCCGCCAACGATGTATGCTGGAGCTGTGCAGTCTGAC
CCGACGGCTGCTTATGGTCAGCATCAGCCTCAGATGTTTGAAGGAATGTA
TGCAGCGTATCCGCATCTACCACCCCAGCAGTGAATGGAACAAACTGCAC
AAACCCCTGGAACACAGCAGGGCAGGCAGCAGCCTGTGTACGACACCAGA
AATGGCGGGCATTATGGTGCTAGCGCAGCGCTTTCTGCGCAAGGCTATGC
GCCTGTTGCTGAGCTCTATACCGGGACATGGGCGAATGTCAACCAAGGCC
TGCAGGGAACCGCCCGCGATATACTTACAACATATTGGCAGCACATCATC
AACCATCTAGAGTCGGACAACCATGATTACAAGATACACCAACTACCACT
GGCTCGCATCAAAAAGGTCATGAAGGCTGACCCAGAGGTTAAAATGATAT
CAGCGGAAGCACCAATACTTTTTGCCAAAGGCTGTGATATCTTTATCACT
GAACTGACCATGCGGGCATGGATTCATGCCGAGGACAACAAGCGGCGTAC
GCTACAGAGGTCTGATATTGCAGCAGCACTATCAAAATCTGACATGTTTG
ATTTCCTCATTGACATAGTACCTCGCGAGGAGGCCACGTCCCATGCAAAG
CGGTCTAGCCAGACAGCTGGAGCTTCTGCAGGCGTCCCCGGCCCTGCAGG
AGCCACCGGCCAACTGCCACCATCCCAACACGGTGTTCCCCACCACATGC
CTCCGCCGGACTATAGTACCCTCGGTCAGCATGGGCTCCAAGATCAAGAA
TATCGGCCGCCAACGATGTATGCTGGAGCTGTGCAGTCTGACCCGACGGC
TGCTTATGGTCAGCATCAGCCTCAGATGTTTGAAGGAATGTATGCAGCGT
ATCCGCATCTACCACCCCAGCAGTGAATGGAACAAACTGCACAAACCCCT
GGAACACAGCAGGGCAGGCAGCAGCCTGTGTACGACACCAGAAATGGCGG
GCATTATGGTGCTAGCGCAGCGCTTTCTGCGCAAGGCTATGCGCCTGTTG
CTGAGCTCTATACCGGGACATGGGCGAATGTCAACCAAGGCCTGCAGGGA
ACCGCCCGCGATATACTTACAACATATTGGCAGCACATCATCAACCATCT
AGAGTCGGACAACCATGATTACAAGATACACCAACTACCACTGGCTCGCA
TCAAAAAGGTCATGAAGGCTGACCCAGAGGTTAAAATGATATCAGCGGAA
GCACCAATACTTTTTGCCAAAGGCTGTGATATCTTTATCACTGAACTGAC
CATGCGGGCATGGATTCATGCCGAGGACAACAAGCGGCGTACGCTACAGA
GGTCTGATATTGCAGCAGCACTATCAAAATCTGACATGTTTGATTTCCTC
ATTGACATAGTACCTCGCGAGGAGGCCACGTCCCATGCAAAGCGGTCTAG
CCAGACAGCTGGAGCTTCTGCAGGCGTCCCCGGCCCTGCAGGAGCCACCG
GCCAACTGCCACCATCCCAACACGGTGTTCCCCACCACATGCCTCCGCCG
GACTATAGTACCCTCGGTCAGCATGGGCTCCAAGATCAAGAATATCGGCC
GCCAACGATGTATGCTGGAGCTGTGCAGTCTGACCCGACGGCTGCTTATG
GTCAGCATCAGCCTCAGATGTTTGAAGGAATGTATGCAGCGTATCCGCAT
CTACCACCCCAGCAGTGAATGGAACAAACTGCACAAACCCCTGGAACACA
GCAGGGCAGGCAGCAGCCTGTGTACGACACCAGAAATGGCGGGCATTATG
GTGCTAGCGCAGCGCTTTCTGCGCAAGGCTATGCGCCTGTTGCTGAGCTC
TATACCGGGACATGGGCGAATGTCAACCAAGGCCTGCAGGGAACCGCCCG
CGATATACTTACAACATATTGGCAGCACATCATCAACCATCTAGAGTCGG
ACAACCATGATTACAAGATACACCAACTACCACTGGCTCGCATCAAAAAG
GTCATGAAGGCTGACCCAGAGGTTAAAATGATATCAGCGGAAGCACCAAT
ACTTTTTGCCAAAGGCTGTGATATCTTTATCACTGAACTGACCATGCGGG
CATGGATTCATGCCGAGGACAACAAGCGGCGTACGCTACAGAGGTCTGAT
ATTGCAGCAGCACTATCAAAATCTGACATGTTTGATTTCCTCATTGACAT
AGTACCTCGCGAGGAGGCCACGTCCCATGCAAAGCGGTCTAGCCAGACAG
CTGGAGCTTCTGCAGGCGTCCCCGGCCCTGCAGGAGCCACCGGCCAACTG
CCACCATCCCAACACGGTGTTCCCCACCACATGCCTCCGCCGGACTATAG
TACCCTCGGTCAGCATGGGCTCCAAGATCAAGAATATCGGCCGCCAACGA
TGTATGCTGGAGCTGTGCAGTCTGACCCGACGGCTGCTTATGGTCAGCAT
CAGCCTCAGATGTTTGAAGGAATGTATGCAGCGTATCCGCATCTACCACC
CCAGCAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003771KJC3_003771Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003771-T1KJC3_003771-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003771-T1.utr5p1KJC3_003771-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003771-T1.exon1KJC3_003771-T1.exon1Aspergillus niger KJC3exon
KJC3_003771-T1.exon2KJC3_003771-T1.exon2Aspergillus niger KJC3exon
KJC3_003771-T1.exon3KJC3_003771-T1.exon3Aspergillus niger KJC3exon
KJC3_003771-T1.exon4KJC3_003771-T1.exon4Aspergillus niger KJC3exon
KJC3_003771-T1.exon5KJC3_003771-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003771-T1.cdsKJC3_003771-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003771-T1.utr3p1KJC3_003771-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003958
DBxrefInterPro:IPR009072
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2997800..2999353 +
Powered by Drupal