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KJC3_003780-T1, KJC3_003780-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003780-T1
Unique NameKJC3_003780-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3020256..3021131-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003780-T1 ID=KJC3_003780-T1|Name=KJC3_003780-T1|organism=Aspergillus niger KJC3|type=mRNA|length=876bp|location=Sequence derived from alignment at ch3:3020256..3021131- (Aspergillus niger KJC3)
TATTAAGTCGTAGCTGGTATATACCGAACGGACTTGCGACGATTTGGATC
TGTCCTCATCCCCCACCCAAGCTTCGAAAGAGACCTTCACAATGGCCGCC
AACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGTACGTCACTAGCACC
TTTTTACGCATATCTTATCCATTATCCCAATGGAAACCCTAGGAGCCGTT
TCGCGCCTCGTCTTCCCCGGCTAATGTTACGACTACCTCAACAGGCACCC
AGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCC
CGTGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGGTACGAACCCT
GAACGCAAGGTCTGGGTCATGTTTTCGTGCTAATCTCAAATCACCTGCTT
AGTACGCCGGCTATGCCAACACCAAGGTACTTTACCCGCGCTTCATGCCA
TAGAGATTCTTCTGTCAGGGATTGGATGTTTAACGCTGCAACAACAGGCG
GTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAGAA
GCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTACG
GCCCTAACGCCTCCACCCGCAAGTAAGTCAATATGAGCAGTTGGCGTGCT
GTGATGTCCGTGAGGGAGGCGCGACAGTCTGCTGATACTGCTCTCGCATA
GGATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCT
GATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCA
GAAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCA
GAAAGGCCGAGGAGAAGTCGGAGTAA
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Coding sequence (CDS) from alignment at ch3:3020256..3021131-

>KJC3_003780-T1 ID=KJC3_003780-T1|Name=KJC3_003780-T1|organism=Aspergillus niger KJC3|type=CDS|length=2310bp|location=Sequence derived from alignment at ch3:3020256..3021131- (Aspergillus niger KJC3)
GATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTG
ATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAG
AAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAG
AAAGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGA
ACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCT
GCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAA
TACGCCGGCTATGCCAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAG
CGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCA
GAACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCT
GGCAGCTCACCCGATCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACG
GCTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATC
CGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGG
TGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCC
AGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAAC
CCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTACGGCCCTAACGC
CTCCACCCGCAATACGCCGGCTATGCCAACACCAAGGCACCCAGAATGCT
TTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCC
CCTGAACTTGCAGAACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCA
GCGACCTCATCTGGCAGCTCACCCGATCTACAAGGGTGTTGCCGACAAGA
CTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGACGCTGTCGCCCGC
GTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGAGACTCCCGCTCA
GAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGAAGTCGGAGTAAG
CGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCTGTCATCACCAAG
AAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGTTACCGTGACCTA
CGGCCCTAACGCCTCCACCCGCAATACGCCGGCTATGCCAACACCAAGGC
ACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGGTGGTTCTCAGTT
CTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTTTCAAGATGGCCG
CCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGATCTACAAGGGTG
TTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGATATCCGTGAGGAC
GCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAAGGCCAAGAAGGA
GACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAAAGGCCGAGGAGA
AGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGAACGGCGGTGTTGCT
GTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGCCAAGAACGTCGT
TACCGTGACCTACGGCCCTAACGCCTCCACCCGCAATACGCCGGCTATGC
CAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAGCGTAACAGCGGCGG
TGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGAACAAGCACTCTT
TCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCTGGCAGCTCACCCGA
TCTACAAGGGTGTTGCCGACAAGACTGCCAAGAACGGCTACCGCGCTGAT
ATCCGTGAGGACGCTGTCGCCCGCGTCAGCGCCATCCGCCGCTCCCAGAA
GGCCAAGAAGGAGACTCCCGCTCAGAAGCCCCGCGGTGCTAAGGCCAGAA
AGGCCGAGGAGAAGTCGGAGTAAGCGGTTGGTGTCCAGGCCACCGAGAAC
GGCGGTGTTGCTGTCATCACCAAGAAGCCCAGCAACCCCCAGCAGCCTGC
CAAGAACGTCGTTACCGTGACCTACGGCCCTAACGCCTCCACCCGCAATA
CGCCGGCTATGCCAACACCAAGGCACCCAGAATGCTTTTCTGGTCAAGCG
TAACAGCGGCGGTGGTTCTCAGTTCTCCCGTGACCCCCTGAACTTGCAGA
ACAAGCACTCTTTCAAGATGGCCGCCAACGTTTCCAGCGACCTCATCTGG
CAGCTCACCC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003780KJC3_003780Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003780-T1KJC3_003780-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003780-T1.cdsKJC3_003780-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003780-T1.exon5KJC3_003780-T1.exon5Aspergillus niger KJC3exon
KJC3_003780-T1.exon4KJC3_003780-T1.exon4Aspergillus niger KJC3exon
KJC3_003780-T1.exon3KJC3_003780-T1.exon3Aspergillus niger KJC3exon
KJC3_003780-T1.exon2KJC3_003780-T1.exon2Aspergillus niger KJC3exon
KJC3_003780-T1.exon1KJC3_003780-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003780-T1.utr5p1KJC3_003780-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029004
DBxrefPFAM:PF01778
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3020256..3021131 -
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