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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3026765..3029473- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003785-T1 ID=KJC3_003785-T1|Name=KJC3_003785-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2709bp|location=Sequence derived from alignment at ch3:3026765..3029473- (Aspergillus niger KJC3)
TTTTTTTGTTTTTCTTATGTTGCTTTTCTTTTCTGTTCTTCTGATTCAAG
AAATAAAGTAGGAGGAATTAATTAAAGGGAATCAAGACGGCCCGAACAAA
ATAAGGGAAAGACAGAGAGAGAAGGGGAAAAAAAGAAAAAGGAAAAAAGC
CGAATAAACTTACCCAAGAAGACAGGCTGAAGAATCAAGCCGTATATTTG
CTTATTGGTGATCCCCCATTGTCAAAATCAATGTCATAGCCCACCTCGTT
GCGACTGCCGGCTACAATCCATTGTCTCTCTCCACTCTTCTTCTTCCTTG
CCCTACTCAAGAGTTTATATACATCTGGAGCCACTCTGGTCAATTCTTCC
CTCAGAGACACGCTCAGCTTGTGGGGAACTCAAATTTCCATTGCTGATAC
TGATGTTTGCTTTTTGAGATCTTGATCTTGATCTTGACTTGATACCCTAT
ATATTTTATTTGCTTGTTCCCGACCTGTTTGCTTCTTTACTTCATCATAA
ACTCCCTTTGCTTGGTGTCATATCAACAAGCAGCGTGGGCCCTGTCTTTC
GAAGATAGTGGGTGAGTGACAAAGTCTTTCAAATCAACAAGACTTACCCC
GCGAGGACAGTTTCGGACATTGTAGATGGGTTACTGAGACGTGATAGCAG
GCAGTATCCTATTCTTCCCATCGGACTATCTTGCTGTCTCTGTTCCGTTG
CTCATCTTGCTTTTCAGACGCTTGCAATCAGCTCGGTAGGAGTTGAAGGC
TCTTTAAGGCCCAGTGGTGGAGAGAACGCAAAGTCCAGCAACCCTTTCAT
TGCTAGTTTGTCGACATGGAAACCGCAGAACCAGTTTCATACGAATTCCC
CGGCCACGCCGTTGGGGCTGTTGCGCCTCGTCGAATGATGGGCTCGAATG
TCGGCCACAACTTCCCATTTTATACCAACCCGACTGGTGGCTATACACTT
CCGTTTCATCAATCTTCGTCACCAGCGTATAGCTTCGGACACACACTCAA
CCACCATCACCATCATCACCACCATCATCCGGGCTACCAGCATTACTTTG
TAGCCGGCCAGCAGCCGATCAATCCCCAGCCGGTCCGTCTATCCTCTGAG
CCGCCATCCATCCAGCAAATTCCCGATATTCGGCCGGCCAAGAATGCTGT
TAATCGTGTAGCCAGGGATCCTCTGATGAAGATCGAGCACAATGGGGCGT
CACAGCAACCTCCCGGGGCCCAGTCCTCGAGTAACGAAGAAGGTGCACAA
GGGAAGAGCTCCAGCTCCAATGAGGTGGAATTCTCGACAGAGGTAGATAT
CTTGATGAAGGCAATCCAGGCCAAAGCCAGTGCTCAGTCACCCGGAGTAC
AGTCTCTGCCGCCACTGCAACAATTGACACACGGGGGAAGCAATGGATAC
CCTCAGAGTTATTCAATGCCGGTGACGACCCCCCGGTGCACTGTTATGGT
CGAAGAAGCCCCATCGCGATCAGGCAAAAAACGCAAGTATGCTTGCACTT
TACCGCAGTGCGGCAAGAGCTTCGCGCAGAAGACGCATCTGGATATTCAT
ATGCGGGCTCACACGGGGGACAAGCCCTTTGTAGGTGGCATGAGAATAGA
CACTTATTGAAATATGACGCTAACCTAACCTTTCGTGCTAAGGTGTGCAA
AGAGCCTTCATGTGGACAGCGCTTCTCTCAGTTGGGTAATCTGAAGGTGA
GTTATTGGACGTTCGGCAAAAAAGCCCCCTATAAGAAGAGCATCAACAGC
ATTGAAGATGTTGCAGGCCGTCTAACAGAGACAATTGATAATTAGACTCA
TCAACGACGCCATACTGGAGAAAAGCCATTTTCTTGTGATATATGTCAGA
AACGATTTGCTCAACGAGGCAACGTCCGTGCTCACAAGATCACCCATCAA
CATGCCAAACCATTCACTTGTCTCCTGGATGACTGCGGAAAGCAGTTCAC
CCAGCTTGGAAACCTTAAGGTGCGGAGACCAATAATTCATCAACCCCGAA
ACCAATCCCCTCAATGATAGCTGACTGCTATAACAGTCACACCAGAACAA
GTTCCATGCCACAACCCTACGAAATCTTACTATGAAATTCTCCCAAGTGA
CAGAGGGAGATCACATGAGCCCACAAGACAGAAAGCTCTGGGAATACTTT
GCCACTTTGTATAAGAACAGCAACAAAGGAATCAAGGGCCGCGGGAAAGA
TCGCAGGATCTCGCCTACTTCACGGTCTGATCCTGGCTCCGAATCCCGCA
GAAGGATCGAGCCACTCAGCAGCACTGATGACAAGATGCGCCGAGCAAGC
TATGGAGATACATCTATGTATAACGGAGGTTCTAGCAGCGATGACGACGA
CGCAGAACCATACTTTATTGAGAGGCAGGCTCATTGATATACCGGCCTTC
TTCATATTTCTTACAATCTTGTCGCGTCATCCACATTCCCCTCTTTTGTT
ATTACGATACCAGTCTCGTTCGTGTTGATTTTATCTGCCTTATACTTCCC
GCATATCATGTTGAATATGGTGTTCGCGTGAATTAGGGCTTTCACAGACG
TTTTCGTTCGGCTTAAAGACTCTTCTTATGTACATCAGCGTGTTTCCTTT
CATTCTCATCCCTTTCCTTGGACATATATACCTGTGGTGGACAAAGTCTT
TTTAGTATGTTCTGGTTCTCATCATGTTGATCCGTATGATTATATCAAAA
CTGCTACAA back to topCoding sequence (CDS) from alignment at ch3:3026765..3029473- >KJC3_003785-T1 ID=KJC3_003785-T1|Name=KJC3_003785-T1|organism=Aspergillus niger KJC3|type=CDS|length=5376bp|location=Sequence derived from alignment at ch3:3026765..3029473- (Aspergillus niger KJC3)
TCACACCAGAACAAGTTCCATGCCACAACCCTACGAAATCTTACTATGAA
ATTCTCCCAAGTGACAGAGGGAGATCACATGAGCCCACAAGACAGAAAGC
TCTGGGAATACTTTGCCACTTTGTATAAGAACAGCAACAAAGGAATCAAG
GGCCGCGGGAAAGATCGCAGGATCTCGCCTACTTCACGGTCTGATCCTGG
CTCCGAATCCCGCAGAAGGATCGAGCCACTCAGCAGCACTGATGACAAGA
TGCGCCGAGCAAGCTATGGAGATACATCTATGTATAACGGAGGTTCTAGC
AGCGATGACGACGACGCAGAACCATACTTTATTGAGAGGCAGGCTCATTG
AACTCATCAACGACGCCATACTGGAGAAAAGCCATTTTCTTGTGATATAT
GTCAGAAACGATTTGCTCAACGAGGCAACGTCCGTGCTCACAAGATCACC
CATCAACATGCCAAACCATTCACTTGTCTCCTGGATGACTGCGGAAAGCA
GTTCACCCAGCTTGGAAACCTTAAGGTGTGCAAAGAGCCTTCATGTGGAC
AGCGCTTCTCTCAGTTGGGTAATCTGAAGATGGAAACCGCAGAACCAGTT
TCATACGAATTCCCCGGCCACGCCGTTGGGGCTGTTGCGCCTCGTCGAAT
GATGGGCTCGAATGTCGGCCACAACTTCCCATTTTATACCAACCCGACTG
GTGGCTATACACTTCCGTTTCATCAATCTTCGTCACCAGCGTATAGCTTC
GGACACACACTCAACCACCATCACCATCATCACCACCATCATCCGGGCTA
CCAGCATTACTTTGTAGCCGGCCAGCAGCCGATCAATCCCCAGCCGGTCC
GTCTATCCTCTGAGCCGCCATCCATCCAGCAAATTCCCGATATTCGGCCG
GCCAAGAATGCTGTTAATCGTGTAGCCAGGGATCCTCTGATGAAGATCGA
GCACAATGGGGCGTCACAGCAACCTCCCGGGGCCCAGTCCTCGAGTAACG
AAGAAGGTGCACAAGGGAAGAGCTCCAGCTCCAATGAGGTGGAATTCTCG
ACAGAGGTAGATATCTTGATGAAGGCAATCCAGGCCAAAGCCAGTGCTCA
GTCACCCGGAGTACAGTCTCTGCCGCCACTGCAACAATTGACACACGGGG
GAAGCAATGGATACCCTCAGAGTTATTCAATGCCGGTGACGACCCCCCGG
TGCACTGTTATGGTCGAAGAAGCCCCATCGCGATCAGGCAAAAAACGCAA
GTATGCTTGCACTTTACCGCAGTGCGGCAAGAGCTTCGCGCAGAAGACGC
ATCTGGATATTCATATGCGGGCTCACACGGGGGACAAGCCCTTTTCACAC
CAGAACAAGTTCCATGCCACAACCCTACGAAATCTTACTATGAAATTCTC
CCAAGTGACAGAGGGAGATCACATGAGCCCACAAGACAGAAAGCTCTGGG
AATACTTTGCCACTTTGTATAAGAACAGCAACAAAGGAATCAAGGGCCGC
GGGAAAGATCGCAGGATCTCGCCTACTTCACGGTCTGATCCTGGCTCCGA
ATCCCGCAGAAGGATCGAGCCACTCAGCAGCACTGATGACAAGATGCGCC
GAGCAAGCTATGGAGATACATCTATGTATAACGGAGGTTCTAGCAGCGAT
GACGACGACGCAGAACCATACTTTATTGAGAGGCAGGCTCATTGAACTCA
TCAACGACGCCATACTGGAGAAAAGCCATTTTCTTGTGATATATGTCAGA
AACGATTTGCTCAACGAGGCAACGTCCGTGCTCACAAGATCACCCATCAA
CATGCCAAACCATTCACTTGTCTCCTGGATGACTGCGGAAAGCAGTTCAC
CCAGCTTGGAAACCTTAAGGTGTGCAAAGAGCCTTCATGTGGACAGCGCT
TCTCTCAGTTGGGTAATCTGAAGATGGAAACCGCAGAACCAGTTTCATAC
GAATTCCCCGGCCACGCCGTTGGGGCTGTTGCGCCTCGTCGAATGATGGG
CTCGAATGTCGGCCACAACTTCCCATTTTATACCAACCCGACTGGTGGCT
ATACACTTCCGTTTCATCAATCTTCGTCACCAGCGTATAGCTTCGGACAC
ACACTCAACCACCATCACCATCATCACCACCATCATCCGGGCTACCAGCA
TTACTTTGTAGCCGGCCAGCAGCCGATCAATCCCCAGCCGGTCCGTCTAT
CCTCTGAGCCGCCATCCATCCAGCAAATTCCCGATATTCGGCCGGCCAAG
AATGCTGTTAATCGTGTAGCCAGGGATCCTCTGATGAAGATCGAGCACAA
TGGGGCGTCACAGCAACCTCCCGGGGCCCAGTCCTCGAGTAACGAAGAAG
GTGCACAAGGGAAGAGCTCCAGCTCCAATGAGGTGGAATTCTCGACAGAG
GTAGATATCTTGATGAAGGCAATCCAGGCCAAAGCCAGTGCTCAGTCACC
CGGAGTACAGTCTCTGCCGCCACTGCAACAATTGACACACGGGGGAAGCA
ATGGATACCCTCAGAGTTATTCAATGCCGGTGACGACCCCCCGGTGCACT
GTTATGGTCGAAGAAGCCCCATCGCGATCAGGCAAAAAACGCAAGTATGC
TTGCACTTTACCGCAGTGCGGCAAGAGCTTCGCGCAGAAGACGCATCTGG
ATATTCATATGCGGGCTCACACGGGGGACAAGCCCTTTTCACACCAGAAC
AAGTTCCATGCCACAACCCTACGAAATCTTACTATGAAATTCTCCCAAGT
GACAGAGGGAGATCACATGAGCCCACAAGACAGAAAGCTCTGGGAATACT
TTGCCACTTTGTATAAGAACAGCAACAAAGGAATCAAGGGCCGCGGGAAA
GATCGCAGGATCTCGCCTACTTCACGGTCTGATCCTGGCTCCGAATCCCG
CAGAAGGATCGAGCCACTCAGCAGCACTGATGACAAGATGCGCCGAGCAA
GCTATGGAGATACATCTATGTATAACGGAGGTTCTAGCAGCGATGACGAC
GACGCAGAACCATACTTTATTGAGAGGCAGGCTCATTGAACTCATCAACG
ACGCCATACTGGAGAAAAGCCATTTTCTTGTGATATATGTCAGAAACGAT
TTGCTCAACGAGGCAACGTCCGTGCTCACAAGATCACCCATCAACATGCC
AAACCATTCACTTGTCTCCTGGATGACTGCGGAAAGCAGTTCACCCAGCT
TGGAAACCTTAAGGTGTGCAAAGAGCCTTCATGTGGACAGCGCTTCTCTC
AGTTGGGTAATCTGAAGATGGAAACCGCAGAACCAGTTTCATACGAATTC
CCCGGCCACGCCGTTGGGGCTGTTGCGCCTCGTCGAATGATGGGCTCGAA
TGTCGGCCACAACTTCCCATTTTATACCAACCCGACTGGTGGCTATACAC
TTCCGTTTCATCAATCTTCGTCACCAGCGTATAGCTTCGGACACACACTC
AACCACCATCACCATCATCACCACCATCATCCGGGCTACCAGCATTACTT
TGTAGCCGGCCAGCAGCCGATCAATCCCCAGCCGGTCCGTCTATCCTCTG
AGCCGCCATCCATCCAGCAAATTCCCGATATTCGGCCGGCCAAGAATGCT
GTTAATCGTGTAGCCAGGGATCCTCTGATGAAGATCGAGCACAATGGGGC
GTCACAGCAACCTCCCGGGGCCCAGTCCTCGAGTAACGAAGAAGGTGCAC
AAGGGAAGAGCTCCAGCTCCAATGAGGTGGAATTCTCGACAGAGGTAGAT
ATCTTGATGAAGGCAATCCAGGCCAAAGCCAGTGCTCAGTCACCCGGAGT
ACAGTCTCTGCCGCCACTGCAACAATTGACACACGGGGGAAGCAATGGAT
ACCCTCAGAGTTATTCAATGCCGGTGACGACCCCCCGGTGCACTGTTATG
GTCGAAGAAGCCCCATCGCGATCAGGCAAAAAACGCAAGTATGCTTGCAC
TTTACCGCAGTGCGGCAAGAGCTTCGCGCAGAAGACGCATCTGGATATTC
ATATGCGGGCTCACACGGGGGACAAGCCCTTTTCACACCAGAACAAGTTC
CATGCCACAACCCTACGAAATCTTACTATGAAATTCTCCCAAGTGACAGA
GGGAGATCACATGAGCCCACAAGACAGAAAGCTCTGGGAATACTTTGCCA
CTTTGTATAAGAACAGCAACAAAGGAATCAAGGGCCGCGGGAAAGATCGC
AGGATCTCGCCTACTTCACGGTCTGATCCTGGCTCCGAATCCCGCAGAAG
GATCGAGCCACTCAGCAGCACTGATGACAAGATGCGCCGAGCAAGCTATG
GAGATACATCTATGTATAACGGAGGTTCTAGCAGCGATGACGACGACGCA
GAACCATACTTTATTGAGAGGCAGGCTCATTGAACTCATCAACGACGCCA
TACTGGAGAAAAGCCATTTTCTTGTGATATATGTCAGAAACGATTTGCTC
AACGAGGCAACGTCCGTGCTCACAAGATCACCCATCAACATGCCAAACCA
TTCACTTGTCTCCTGGATGACTGCGGAAAGCAGTTCACCCAGCTTGGAAA
CCTTAAGGTGTGCAAAGAGCCTTCATGTGGACAGCGCTTCTCTCAGTTGG
GTAATCTGAAGATGGAAACCGCAGAACCAGTTTCATACGAATTCCCCGGC
CACGCCGTTGGGGCTGTTGCGCCTCGTCGAATGATGGGCTCGAATGTCGG
CCACAACTTCCCATTTTATACCAACCCGACTGGTGGCTATACACTTCCGT
TTCATCAATCTTCGTCACCAGCGTATAGCTTCGGACACACACTCAACCAC
CATCACCATCATCACCACCATCATCCGGGCTACCAGCATTACTTTGTAGC
CGGCCAGCAGCCGATCAATCCCCAGCCGGTCCGTCTATCCTCTGAGCCGC
CATCCATCCAGCAAATTCCCGATATTCGGCCGGCCAAGAATGCTGTTAAT
CGTGTAGCCAGGGATCCTCTGATGAAGATCGAGCACAATGGGGCGTCACA
GCAACCTCCCGGGGCCCAGTCCTCGAGTAACGAAGAAGGTGCACAAGGGA
AGAGCTCCAGCTCCAATGAGGTGGAATTCTCGACAGAGGTAGATATCTTG
ATGAAGGCAATCCAGGCCAAAGCCAGTGCTCAGTCACCCGGAGTACAGTC
TCTGCCGCCACTGCAACAATTGACACACGGGGGAAGCAATGGATACCCTC
AGAGTTATTCAATGCCGGTGACGACCCCCCGGTGCACTGTTATGGTCGAA
GAAGCCCCATCGCGATCAGGCAAAAAACGCAAGTATGCTTGCACTTTACC
GCAGTGCGGCAAGAGCTTCGCGCAGAAGACGCATCTGGATATTCATATGC
GGGCTCACACGGGGGACAAGCCCTTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003785-T1.utr3p1 | KJC3_003785-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3026765..3029473 - |
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