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KJC3_003786-T1, KJC3_003786-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003786-T1
Unique NameKJC3_003786-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3035854..3040716-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003786-T1 ID=KJC3_003786-T1|Name=KJC3_003786-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4863bp|location=Sequence derived from alignment at ch3:3035854..3040716- (Aspergillus niger KJC3)
GCTCGCTTCGGGCGGCAAAACGGGCACGTCCATTGGGTGGCGGTGGTTCT
CCGGACCCGGAACAGCCGAGCGTGACCCGGAGGAACCTTACCTAAGAAAG
ACTAACGAACTCGAACCTGAACTGAACGGACCTTCAACTGTCACTTCATC
TCGCTCTCCTCCTCCTTCAGCCTCAGCTTCTGCTCCTCCTTCCCCTCTTC
CCTTGTCGTCCTTTCATCGTCTCGCCTTTCATCCATCGTCCGCCCCGGAT
CGTCGTCCACGCGCATTTATCCTCATTCAACATCCTTTCCCCTCATTTTC
TTCTGCTGTTTTCCCCTTTCCGACCACGTTGCCGCGCCGAGTCCTCAGGG
GGCGCGCTGTGATGCGGCTGCGGTGATCGATTTCCTCACACCAGTCTCTG
TCGCCTAACAGCGACTCCCGTCGCCCATATTTTCTTGTTTTCTCCCGGAG
TCGCGGATTACTCTTGCCGTTGAACTAGTTACCCCTTCGGTCGACCACCA
ACCAATTTCCCCACCACCACCACTGACTTTCCACCCAAGCGACTTTCGTT
CCACGTCTCGTTGCTCGGATTGTCTACCCCCTCTATCGTTGTTCAAGTGA
ACACGGGATTAAAACGACACAAATCTTTCGCGCTATGTATAACACTCATC
GCGGAATGGTTCCGGCTCCCAACTCCCGTCTGACGGAGTTGTTGGACCAA
CTGCGCCAGGAATTCGAGAATCAGTCTCGAAGCACTGGCGAGTTCGAACA
TCAGCGTATGTTTTGATATTTCCCTGGTCCTTTGTGTTCTTTGGATTGGC
TTTGCGACGGGGGGCTTGCTTGTTACGGCGCGTTTCCGTTGGGTTGCACC
TTGTGGCGCAGGTTAACGGCGTACGGGTGAACTCCGGAGTTTCAATGCAA
TGGAGAGCATCCTGTGTCGTCAATTGTTATATCTAACGTTATTTTCCCGC
CGTTGGTGTATATTGCTGACCCTTGGTTTCTACCGTCCCTAGTAACCGGA
CAGCTTCAAGAGATGGAGATGATCCGCCAGAAGGTCTATCAACTGGAACA
GGCACAACTCAAGATGAAACAAGAGTACGTGACTTGAGCCCCGGCGGCTC
ATCCTACCCCATAGCCGAATTAACGCCTTATCTATTGTTGTAGTTACGAA
GCAGAGATTCGGGTGCTGCGACATGAGCTTGAATCGCGCGGTGTTCAGCC
CGTGTCATCTCACATTGCCGGCCCGGCCCAGCACGCTGGACCTTCTCAGG
CTCCGCCACCGGCCCTGGGTCACGGCCCTAGCAATCTGTTTGGTGGCATC
ATGACCAACCAAGGAGGTAGTGGCCCCGGTCTTCCAGTTGCCCCTCCCCC
TCCCCAGGATCAGCAGCCTCCCCAGCATACCCTTCAACAGCCTGCTGCCG
CGGCCCAGCAAGGAGCGCCGCAACCACCGCAGAGCTCTTTTGGAGGATAT
CAGCCTGGTGCTGCTGTGAACGGTATGTTATGACTATGTTTGATAGACAA
ATTGCCTGACCTCTGACCTCGTGATCGCCTCGATCTCTAAACAGGTTATG
GACCTCCCCCTCCTCCTGCTGCCTCCCCCGGCCCTGGCAAGCGGCCCCGT
GCTCCTCCCGGCCCGGCCACTCCTCAACAGACCCACCAGCTGGCCTACAC
ATCCGATCCCCGCGTCTCCTCGCCGCAATTGGCCCGCCCCACGCCTCCTA
GCCAGGCCCTCGTGCGAGATCGTCCGGGAAACATGCTGGCCAATTGGAAT
CCTGACGATCTGCCGGCGTCGCAAAAGCGAGAGGGCGCCGATTGGTATGC
CGTGTTCAATCCTGAGGTGCAGCGCGTGCTGGATGTGGAACTTGTTCATC
ACCTTGTCCACGACAGCGTTGTGTGCTGTGTTCGTTTCAGCCGTGACGGC
AAGTACCTTGCGACCGGCTGCAATCGCTCTGCGCAGATCTTTGACGTGAC
CACGGGTCAGAATGTTGCGACGCTGCAGGACGAAAATGTGGACAAGAACG
GCGACCTTTACATTCGCAGCGTCTGCTTCAGCCCTGATGGCAAGTATCTT
GCGACTGGCGCTGAAGACAAGCAGATTCGGGTATGTGGTCCCGCTGTAAC
ATCACTCGTCATCGTTGATGCCGCTTTGGTGCGCTGTTATACAGAACTGT
TGAGGCTAACCTTTTTTTTCTTCTTCTTTTTACCGTTAGGTGTGGGACAT
CAATGCTCGGACGATTAAGCATATCTTTACCGGTCACGAACAGGATATTT
ACTCTCTTGATTTCGCTGGCAATGGTCGGTACATTGCGTCCGGTAGTGGA
GACAAGACTGTTCGCCTTTGGGATATCCTGGACGGCAAGTTGGTCTACAC
CCTGAGCATCGAAGACGGTGTGACCACCGTTGCTATGTCTCCAGATGGTC
ACTATGTCGCTGCAGGCTCTCTCGATAAGAGTGTGCGAGTTTGGGATACC
ACTACCGGCTACCTTGTGGAACGGTTGGAGAGCCCCGATGGCCACAAGGA
CAGCGTGTACTCGGTTGCCTTCGCCCCCAACGGCCGGGACCTTGTCAGTG
GTAGTCTGGACAAGACCATCAAACTTTGGGAGCTCAACGTGCCCCGTGGC
GCCTACCCCGGAAGCGGAGTCAAGGGTGGTAAATGCGTCCGCACTTTCGA
AGGTCACAAGGTAAGTACATACTTTCCGATAGCAAAAGACCAATACTGGT
TTCGTGGTTGCTGACCTCACGGGTTAGGACTTTGTGCTCAGCGTCTGCCT
GACACCCGACGGACATTGGGTCATGAGCGGTTCTAAAGACCGAGGCGTTC
AGTTCTGGGACCCCATCACCGGAAATGCGCAGATGATGCTCCAGGGACAC
AAGAACTCAGGTTCGTACCTAAACCCCCCGAGCACCATGTCTGGCTTGCT
AGGTGATCTTGGTTTTCGCTAACTCGGTGACAGTCATCTCCGTGGCGCCC
AGCCCTACTAATAACCTGTTTGCCACTGGCAGTGGTGACATGCGGGCAAG
AATCTGGAGGTACGTTTTTACTAGCTTACAAGGCATTGATTGTCCTGGTG
GCTTTGTTTTTCCTTCTTCTCTATCATGAGCATTGTTGACAAGGTCGCTC
GAACAGATACTCTACCTACACTGGACGGTGATGAGAATGATTTGGGAAAG
TTTTGGCGCAATTATGGAATTATGTTTCTTCTTTTCGAATCTTCCGTTTC
CGATTCTCTCTGCTTGTCGCGTCTTGTTCGACGTCACTACCGGGATTTGC
GTTGCAAAAGGCCAATTGCTTTTATTGTCACAGCTCCCATGCACGGGGAA
GTGACCTTGGGGGGTTTTTTTTCAAAGGAGACGAACTGCTACAAGCGAAG
CGAAACAAAAAAAGAGGAAGAAAACAAAATACAATAAAAAGGCTGTACTG
GTAGTAATTTCGCGCTGATTTTGTGGTTGTGAATTTATTCTGAGGAAGCT
GAATGCAATTGTCACGAGAGCAGTGTGATGATCGGTGGGGGGCAGATGCT
TCCTTAGCGGTTGCCATCGTGCAGAGACAACGATAATGATAATCCAGTGG
GCTTGTTGACTGCGGCATATTGTAGTCGGCTAGAAGATCAATCACCCCCT
CCCGATGCTTCAGTTGACTTCATGGTCCACATGATTTGCTGGCTCCGACA
AAGTAGCCATTTAAGAGCGCAGGGATGTACTTCTCTGGCTACCTATACCC
GTAAGATCACCTTCAATCGGGATATCCGTAGTCCCCATTACGGGCACCTG
CACGTTGCGGGGGGGTGAAATCAGCAGTCGGCACCGCTATTCGGTCACCA
TGCATATAAATGCATGATCGTAAAACTATGATTGTCTTGGACATCCAGGA
AAAGAGCTGGCAGTGCCGTCACTAAGGGGCATAGGCTGCCATGCAATCTC
TCGGAATTGAACTAGCATTGGTAGTGGATGCAAGTTGTTGAATTGGTCAC
GGACCTATGTTCTCGCATTACGAAGAACTGCAGTAGCGGCGTACATCGCA
TTGGACTCCCATATCGAGAATATATAAACTCCGTGGTCCGTAGGGAATCC
ACTCGGGGATCTATGGGTCTAAAGCGAGATCGATACCTATCTAGTTGGTC
GGGCCCACGGACTTTTCCGGGAAGGCTAAGTAAGCACAGCAGGTGTACCG
GACATTTTTGAGGCACTGGCATAGCCGCCACCACCAGAGGAAGATCATAG
GTTTCCGTCAGCATCTGAGCTAAATGGAGTTGGATATCGGGATGTGGCAA
GGATCTCAGGATCTGCTTCGGCACAAGACATTTGGATTGTGATTAGCAAG
TAGCAAGACGGTCAGCACAAAGCTCCTTCTACATACTATACTATGAAGAG
TGACAGCCCTCGATTATTCAGATTGAAAGCGTGCATCGCCATGGCTATGC
TATGCCTGCGTATCTCGTCTCGTCGTCTTTCGCGTAAACGGCATAAACCC
GTAGAGGTGAATAAGCAGTGAGTACGAGGTATGGACCGGGCATGGCTCCA
GTGATCTGAGGGCAAGCAAGGCAGGTAGATCCCGGATAGCAATCGGTAAA
GTCACGATCACCCAGGGCTGTACTCCATCGTGCTTAGTAGTAGGAGTACG
TAGTTGGTAGGAAATGAGTGGGGGGAAGGAGCTCTGGAATCTGGATGGCC
TGCGGATGACGATCCTCCAACTAAATGGCTCCTCCTTGTGGGTTTCTGGG
ACTGTTCCCACTCGAAATGTCCATCTCAGTCGACTTAAACGAGGCTTGGT
AAGGGCCCGGAAAAAGCCATTGCCTGGGCTATGCCCGCGGTGTGATGGGA
ATCGACATGCTGCATTGGCATGGGACAACCCAGCAGGTGAGATTAGTTAT
AGGTCAGTAAAAG
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Coding sequence (CDS) from alignment at ch3:3035854..3040716-

>KJC3_003786-T1 ID=KJC3_003786-T1|Name=KJC3_003786-T1|organism=Aspergillus niger KJC3|type=CDS|length=9975bp|location=Sequence derived from alignment at ch3:3035854..3040716- (Aspergillus niger KJC3)
ATACTCTACCTACACTGGACGGTGATCATCTCCGTGGCGCCCAGCCCTAC
TAATAACCTGTTTGCCACTGGCAGTGGTGACATGCGGGCAAGAATCTGGA
GGACTTTGTGCTCAGCGTCTGCCTGACACCCGACGGACATTGGGTCATGA
GCGGTTCTAAAGACCGAGGCGTTCAGTTCTGGGACCCCATCACCGGAAAT
GCGCAGATGATGCTCCAGGGACACAAGAACTCAGGTGTGGGACATCAATG
CTCGGACGATTAAGCATATCTTTACCGGTCACGAACAGGATATTTACTCT
CTTGATTTCGCTGGCAATGGTCGGTACATTGCGTCCGGTAGTGGAGACAA
GACTGTTCGCCTTTGGGATATCCTGGACGGCAAGTTGGTCTACACCCTGA
GCATCGAAGACGGTGTGACCACCGTTGCTATGTCTCCAGATGGTCACTAT
GTCGCTGCAGGCTCTCTCGATAAGAGTGTGCGAGTTTGGGATACCACTAC
CGGCTACCTTGTGGAACGGTTGGAGAGCCCCGATGGCCACAAGGACAGCG
TGTACTCGGTTGCCTTCGCCCCCAACGGCCGGGACCTTGTCAGTGGTAGT
CTGGACAAGACCATCAAACTTTGGGAGCTCAACGTGCCCCGTGGCGCCTA
CCCCGGAAGCGGAGTCAAGGGTGGTAAATGCGTCCGCACTTTCGAAGGTC
ACAAGGTTATGGACCTCCCCCTCCTCCTGCTGCCTCCCCCGGCCCTGGCA
AGCGGCCCCGTGCTCCTCCCGGCCCGGCCACTCCTCAACAGACCCACCAG
CTGGCCTACACATCCGATCCCCGCGTCTCCTCGCCGCAATTGGCCCGCCC
CACGCCTCCTAGCCAGGCCCTCGTGCGAGATCGTCCGGGAAACATGCTGG
CCAATTGGAATCCTGACGATCTGCCGGCGTCGCAAAAGCGAGAGGGCGCC
GATTGGTATGCCGTGTTCAATCCTGAGGTGCAGCGCGTGCTGGATGTGGA
ACTTGTTCATCACCTTGTCCACGACAGCGTTGTGTGCTGTGTTCGTTTCA
GCCGTGACGGCAAGTACCTTGCGACCGGCTGCAATCGCTCTGCGCAGATC
TTTGACGTGACCACGGGTCAGAATGTTGCGACGCTGCAGGACGAAAATGT
GGACAAGAACGGCGACCTTTACATTCGCAGCGTCTGCTTCAGCCCTGATG
GCAAGTATCTTGCGACTGGCGCTGAAGACAAGCAGATTCGGTTACGAAGC
AGAGATTCGGGTGCTGCGACATGAGCTTGAATCGCGCGGTGTTCAGCCCG
TGTCATCTCACATTGCCGGCCCGGCCCAGCACGCTGGACCTTCTCAGGCT
CCGCCACCGGCCCTGGGTCACGGCCCTAGCAATCTGTTTGGTGGCATCAT
GACCAACCAAGGAGATGAAACAAGAATACTCTACCTACACTGGACGGTGA
TCATCTCCGTGGCGCCCAGCCCTACTAATAACCTGTTTGCCACTGGCAGT
GGTGACATGCGGGCAAGAATCTGGAGGACTTTGTGCTCAGCGTCTGCCTG
ACACCCGACGGACATTGGGTCATGAGCGGTTCTAAAGACCGAGGCGTTCA
GTTCTGGGACCCCATCACCGGAAATGCGCAGATGATGCTCCAGGGACACA
AGAACTCAGGTGTGGGACATCAATGCTCGGACGATTAAGCATATCTTTAC
CGGTCACGAACAGGATATTTACTCTCTTGATTTCGCTGGCAATGGTCGGT
ACATTGCGTCCGGTAGTGGAGACAAGACTGTTCGCCTTTGGGATATCCTG
GACGGCAAGTTGGTCTACACCCTGAGCATCGAAGACGGTGTGACCACCGT
TGCTATGTCTCCAGATGGTCACTATGTCGCTGCAGGCTCTCTCGATAAGA
GTGTGCGAGTTTGGGATACCACTACCGGCTACCTTGTGGAACGGTTGGAG
AGCCCCGATGGCCACAAGGACAGCGTGTACTCGGTTGCCTTCGCCCCCAA
CGGCCGGGACCTTGTCAGTGGTAGTCTGGACAAGACCATCAAACTTTGGG
AGCTCAACGTGCCCCGTGGCGCCTACCCCGGAAGCGGAGTCAAGGGTGGT
AAATGCGTCCGCACTTTCGAAGGTCACAAGGTTATGGACCTCCCCCTCCT
CCTGCTGCCTCCCCCGGCCCTGGCAAGCGGCCCCGTGCTCCTCCCGGCCC
GGCCACTCCTCAACAGACCCACCAGCTGGCCTACACATCCGATCCCCGCG
TCTCCTCGCCGCAATTGGCCCGCCCCACGCCTCCTAGCCAGGCCCTCGTG
CGAGATCGTCCGGGAAACATGCTGGCCAATTGGAATCCTGACGATCTGCC
GGCGTCGCAAAAGCGAGAGGGCGCCGATTGGTATGCCGTGTTCAATCCTG
AGGTGCAGCGCGTGCTGGATGTGGAACTTGTTCATCACCTTGTCCACGAC
AGCGTTGTGTGCTGTGTTCGTTTCAGCCGTGACGGCAAGTACCTTGCGAC
CGGCTGCAATCGCTCTGCGCAGATCTTTGACGTGACCACGGGTCAGAATG
TTGCGACGCTGCAGGACGAAAATGTGGACAAGAACGGCGACCTTTACATT
CGCAGCGTCTGCTTCAGCCCTGATGGCAAGTATCTTGCGACTGGCGCTGA
AGACAAGCAGATTCGGTTACGAAGCAGAGATTCGGGTGCTGCGACATGAG
CTTGAATCGCGCGGTGTTCAGCCCGTGTCATCTCACATTGCCGGCCCGGC
CCAGCACGCTGGACCTTCTCAGGCTCCGCCACCGGCCCTGGGTCACGGCC
CTAGCAATCTGTTTGGTGGCATCATGACCAACCAAGGAGATGAAACAAGA
ATACTCTACCTACACTGGACGGTGATCATCTCCGTGGCGCCCAGCCCTAC
TAATAACCTGTTTGCCACTGGCAGTGGTGACATGCGGGCAAGAATCTGGA
GGACTTTGTGCTCAGCGTCTGCCTGACACCCGACGGACATTGGGTCATGA
GCGGTTCTAAAGACCGAGGCGTTCAGTTCTGGGACCCCATCACCGGAAAT
GCGCAGATGATGCTCCAGGGACACAAGAACTCAGGTGTGGGACATCAATG
CTCGGACGATTAAGCATATCTTTACCGGTCACGAACAGGATATTTACTCT
CTTGATTTCGCTGGCAATGGTCGGTACATTGCGTCCGGTAGTGGAGACAA
GACTGTTCGCCTTTGGGATATCCTGGACGGCAAGTTGGTCTACACCCTGA
GCATCGAAGACGGTGTGACCACCGTTGCTATGTCTCCAGATGGTCACTAT
GTCGCTGCAGGCTCTCTCGATAAGAGTGTGCGAGTTTGGGATACCACTAC
CGGCTACCTTGTGGAACGGTTGGAGAGCCCCGATGGCCACAAGGACAGCG
TGTACTCGGTTGCCTTCGCCCCCAACGGCCGGGACCTTGTCAGTGGTAGT
CTGGACAAGACCATCAAACTTTGGGAGCTCAACGTGCCCCGTGGCGCCTA
CCCCGGAAGCGGAGTCAAGGGTGGTAAATGCGTCCGCACTTTCGAAGGTC
ACAAGGTTATGGACCTCCCCCTCCTCCTGCTGCCTCCCCCGGCCCTGGCA
AGCGGCCCCGTGCTCCTCCCGGCCCGGCCACTCCTCAACAGACCCACCAG
CTGGCCTACACATCCGATCCCCGCGTCTCCTCGCCGCAATTGGCCCGCCC
CACGCCTCCTAGCCAGGCCCTCGTGCGAGATCGTCCGGGAAACATGCTGG
CCAATTGGAATCCTGACGATCTGCCGGCGTCGCAAAAGCGAGAGGGCGCC
GATTGGTATGCCGTGTTCAATCCTGAGGTGCAGCGCGTGCTGGATGTGGA
ACTTGTTCATCACCTTGTCCACGACAGCGTTGTGTGCTGTGTTCGTTTCA
GCCGTGACGGCAAGTACCTTGCGACCGGCTGCAATCGCTCTGCGCAGATC
TTTGACGTGACCACGGGTCAGAATGTTGCGACGCTGCAGGACGAAAATGT
GGACAAGAACGGCGACCTTTACATTCGCAGCGTCTGCTTCAGCCCTGATG
GCAAGTATCTTGCGACTGGCGCTGAAGACAAGCAGATTCGGTTACGAAGC
AGAGATTCGGGTGCTGCGACATGAGCTTGAATCGCGCGGTGTTCAGCCCG
TGTCATCTCACATTGCCGGCCCGGCCCAGCACGCTGGACCTTCTCAGGCT
CCGCCACCGGCCCTGGGTCACGGCCCTAGCAATCTGTTTGGTGGCATCAT
GACCAACCAAGGAGATGAAACAAGAATACTCTACCTACACTGGACGGTGA
TCATCTCCGTGGCGCCCAGCCCTACTAATAACCTGTTTGCCACTGGCAGT
GGTGACATGCGGGCAAGAATCTGGAGGACTTTGTGCTCAGCGTCTGCCTG
ACACCCGACGGACATTGGGTCATGAGCGGTTCTAAAGACCGAGGCGTTCA
GTTCTGGGACCCCATCACCGGAAATGCGCAGATGATGCTCCAGGGACACA
AGAACTCAGGTGTGGGACATCAATGCTCGGACGATTAAGCATATCTTTAC
CGGTCACGAACAGGATATTTACTCTCTTGATTTCGCTGGCAATGGTCGGT
ACATTGCGTCCGGTAGTGGAGACAAGACTGTTCGCCTTTGGGATATCCTG
GACGGCAAGTTGGTCTACACCCTGAGCATCGAAGACGGTGTGACCACCGT
TGCTATGTCTCCAGATGGTCACTATGTCGCTGCAGGCTCTCTCGATAAGA
GTGTGCGAGTTTGGGATACCACTACCGGCTACCTTGTGGAACGGTTGGAG
AGCCCCGATGGCCACAAGGACAGCGTGTACTCGGTTGCCTTCGCCCCCAA
CGGCCGGGACCTTGTCAGTGGTAGTCTGGACAAGACCATCAAACTTTGGG
AGCTCAACGTGCCCCGTGGCGCCTACCCCGGAAGCGGAGTCAAGGGTGGT
AAATGCGTCCGCACTTTCGAAGGTCACAAGGTTATGGACCTCCCCCTCCT
CCTGCTGCCTCCCCCGGCCCTGGCAAGCGGCCCCGTGCTCCTCCCGGCCC
GGCCACTCCTCAACAGACCCACCAGCTGGCCTACACATCCGATCCCCGCG
TCTCCTCGCCGCAATTGGCCCGCCCCACGCCTCCTAGCCAGGCCCTCGTG
CGAGATCGTCCGGGAAACATGCTGGCCAATTGGAATCCTGACGATCTGCC
GGCGTCGCAAAAGCGAGAGGGCGCCGATTGGTATGCCGTGTTCAATCCTG
AGGTGCAGCGCGTGCTGGATGTGGAACTTGTTCATCACCTTGTCCACGAC
AGCGTTGTGTGCTGTGTTCGTTTCAGCCGTGACGGCAAGTACCTTGCGAC
CGGCTGCAATCGCTCTGCGCAGATCTTTGACGTGACCACGGGTCAGAATG
TTGCGACGCTGCAGGACGAAAATGTGGACAAGAACGGCGACCTTTACATT
CGCAGCGTCTGCTTCAGCCCTGATGGCAAGTATCTTGCGACTGGCGCTGA
AGACAAGCAGATTCGGTTACGAAGCAGAGATTCGGGTGCTGCGACATGAG
CTTGAATCGCGCGGTGTTCAGCCCGTGTCATCTCACATTGCCGGCCCGGC
CCAGCACGCTGGACCTTCTCAGGCTCCGCCACCGGCCCTGGGTCACGGCC
CTAGCAATCTGTTTGGTGGCATCATGACCAACCAAGGAGATGAAACAAGA
ATACTCTACCTACACTGGACGGTGATCATCTCCGTGGCGCCCAGCCCTAC
TAATAACCTGTTTGCCACTGGCAGTGGTGACATGCGGGCAAGAATCTGGA
GGACTTTGTGCTCAGCGTCTGCCTGACACCCGACGGACATTGGGTCATGA
GCGGTTCTAAAGACCGAGGCGTTCAGTTCTGGGACCCCATCACCGGAAAT
GCGCAGATGATGCTCCAGGGACACAAGAACTCAGGTGTGGGACATCAATG
CTCGGACGATTAAGCATATCTTTACCGGTCACGAACAGGATATTTACTCT
CTTGATTTCGCTGGCAATGGTCGGTACATTGCGTCCGGTAGTGGAGACAA
GACTGTTCGCCTTTGGGATATCCTGGACGGCAAGTTGGTCTACACCCTGA
GCATCGAAGACGGTGTGACCACCGTTGCTATGTCTCCAGATGGTCACTAT
GTCGCTGCAGGCTCTCTCGATAAGAGTGTGCGAGTTTGGGATACCACTAC
CGGCTACCTTGTGGAACGGTTGGAGAGCCCCGATGGCCACAAGGACAGCG
TGTACTCGGTTGCCTTCGCCCCCAACGGCCGGGACCTTGTCAGTGGTAGT
CTGGACAAGACCATCAAACTTTGGGAGCTCAACGTGCCCCGTGGCGCCTA
CCCCGGAAGCGGAGTCAAGGGTGGTAAATGCGTCCGCACTTTCGAAGGTC
ACAAGGTTATGGACCTCCCCCTCCTCCTGCTGCCTCCCCCGGCCCTGGCA
AGCGGCCCCGTGCTCCTCCCGGCCCGGCCACTCCTCAACAGACCCACCAG
CTGGCCTACACATCCGATCCCCGCGTCTCCTCGCCGCAATTGGCCCGCCC
CACGCCTCCTAGCCAGGCCCTCGTGCGAGATCGTCCGGGAAACATGCTGG
CCAATTGGAATCCTGACGATCTGCCGGCGTCGCAAAAGCGAGAGGGCGCC
GATTGGTATGCCGTGTTCAATCCTGAGGTGCAGCGCGTGCTGGATGTGGA
ACTTGTTCATCACCTTGTCCACGACAGCGTTGTGTGCTGTGTTCGTTTCA
GCCGTGACGGCAAGTACCTTGCGACCGGCTGCAATCGCTCTGCGCAGATC
TTTGACGTGACCACGGGTCAGAATGTTGCGACGCTGCAGGACGAAAATGT
GGACAAGAACGGCGACCTTTACATTCGCAGCGTCTGCTTCAGCCCTGATG
GCAAGTATCTTGCGACTGGCGCTGAAGACAAGCAGATTCGGTTACGAAGC
AGAGATTCGGGTGCTGCGACATGAGCTTGAATCGCGCGGTGTTCAGCCCG
TGTCATCTCACATTGCCGGCCCGGCCCAGCACGCTGGACCTTCTCAGGCT
CCGCCACCGGCCCTGGGTCACGGCCCTAGCAATCTGTTTGGTGGCATCAT
GACCAACCAAGGAGATGAAACAAGAATACTCTACCTACACTGGACGGTGA
TCATCTCCGTGGCGCCCAGCCCTACTAATAACCTGTTTGCCACTGGCAGT
GGTGACATGCGGGCAAGAATCTGGAGGACTTTGTGCTCAGCGTCTGCCTG
ACACCCGACGGACATTGGGTCATGAGCGGTTCTAAAGACCGAGGCGTTCA
GTTCTGGGACCCCATCACCGGAAATGCGCAGATGATGCTCCAGGGACACA
AGAACTCAGGTGTGGGACATCAATGCTCGGACGATTAAGCATATCTTTAC
CGGTCACGAACAGGATATTTACTCTCTTGATTTCGCTGGCAATGGTCGGT
ACATTGCGTCCGGTAGTGGAGACAAGACTGTTCGCCTTTGGGATATCCTG
GACGGCAAGTTGGTCTACACCCTGAGCATCGAAGACGGTGTGACCACCGT
TGCTATGTCTCCAGATGGTCACTATGTCGCTGCAGGCTCTCTCGATAAGA
GTGTGCGAGTTTGGGATACCACTACCGGCTACCTTGTGGAACGGTTGGAG
AGCCCCGATGGCCACAAGGACAGCGTGTACTCGGTTGCCTTCGCCCCCAA
CGGCCGGGACCTTGTCAGTGGTAGTCTGGACAAGACCATCAAACTTTGGG
AGCTCAACGTGCCCCGTGGCGCCTACCCCGGAAGCGGAGTCAAGGGTGGT
AAATGCGTCCGCACTTTCGAAGGTCACAAGGTTATGGACCTCCCCCTCCT
CCTGCTGCCTCCCCCGGCCCTGGCAAGCGGCCCCGTGCTCCTCCCGGCCC
GGCCACTCCTCAACAGACCCACCAGCTGGCCTACACATCCGATCCCCGCG
TCTCCTCGCCGCAATTGGCCCGCCCCACGCCTCCTAGCCAGGCCCTCGTG
CGAGATCGTCCGGGAAACATGCTGGCCAATTGGAATCCTGACGATCTGCC
GGCGTCGCAAAAGCGAGAGGGCGCCGATTGGTATGCCGTGTTCAATCCTG
AGGTGCAGCGCGTGCTGGATGTGGAACTTGTTCATCACCTTGTCCACGAC
AGCGTTGTGTGCTGTGTTCGTTTCAGCCGTGACGGCAAGTACCTTGCGAC
CGGCTGCAATCGCTCTGCGCAGATCTTTGACGTGACCACGGGTCAGAATG
TTGCGACGCTGCAGGACGAAAATGTGGACAAGAACGGCGACCTTTACATT
CGCAGCGTCTGCTTCAGCCCTGATGGCAAGTATCTTGCGACTGGCGCTGA
AGACAAGCAGATTCGGTTACGAAGCAGAGATTCGGGTGCTGCGACATGAG
CTTGAATCGCGCGGTGTTCAGCCCGTGTCATCTCACATTGCCGGCCCGGC
CCAGCACGCTGGACCTTCTCAGGCTCCGCCACCGGCCCTGGGTCACGGCC
CTAGCAATCTGTTTGGTGGCATCATGACCAACCAAGGAGATGAAACAAGA
ATACTCTACCTACACTGGACGGTGATCATCTCCGTGGCGCCCAGCCCTAC
TAATAACCTGTTTGCCACTGGCAGTGGTGACATGCGGGCAAGAATCTGGA
GGACTTTGTGCTCAGCGTCTGCCTGACACCCGACGGACATTGGGTCATGA
GCGGTTCTAAAGACCGAGGCGTTCAGTTCTGGGACCCCATCACCGGAAAT
GCGCAGATGATGCTCCAGGGACACAAGAACTCAGGTGTGGGACATCAATG
CTCGGACGATTAAGCATATCTTTACCGGTCACGAACAGGATATTTACTCT
CTTGATTTCGCTGGCAATGGTCGGTACATTGCGTCCGGTAGTGGAGACAA
GACTGTTCGCCTTTGGGATATCCTGGACGGCAAGTTGGTCTACACCCTGA
GCATCGAAGACGGTGTGACCACCGTTGCTATGTCTCCAGATGGTCACTAT
GTCGCTGCAGGCTCTCTCGATAAGAGTGTGCGAGTTTGGGATACCACTAC
CGGCTACCTTGTGGAACGGTTGGAGAGCCCCGATGGCCACAAGGACAGCG
TGTACTCGGTTGCCTTCGCCCCCAACGGCCGGGACCTTGTCAGTGGTAGT
CTGGACAAGACCATCAAACTTTGGGAGCTCAACGTGCCCCGTGGCGCCTA
CCCCGGAAGCGGAGTCAAGGGTGGTAAATGCGTCCGCACTTTCGAAGGTC
ACAAGGTTATGGACCTCCCCCTCCTCCTGCTGCCTCCCCCGGCCCTGGCA
AGCGGCCCCGTGCTCCTCCCGGCCCGGCCACTCCTCAACAGACCCACCAG
CTGGCCTACACATCCGATCCCCGCGTCTCCTCGCCGCAATTGGCCCGCCC
CACGCCTCCTAGCCAGGCCCTCGTGCGAGATCGTCCGGGAAACATGCTGG
CCAATTGGAATCCTGACGATCTGCCGGCGTCGCAAAAGCGAGAGGGCGCC
GATTGGTATGCCGTGTTCAATCCTGAGGTGCAGCGCGTGCTGGATGTGGA
ACTTGTTCATCACCTTGTCCACGACAGCGTTGTGTGCTGTGTTCGTTTCA
GCCGTGACGGCAAGTACCTTGCGACCGGCTGCAATCGCTCTGCGCAGATC
TTTGACGTGACCACGGGTCAGAATGTTGCGACGCTGCAGGACGAAAATGT
GGACAAGAACGGCGACCTTTACATTCGCAGCGTCTGCTTCAGCCCTGATG
GCAAGTATCTTGCGACTGGCGCTGAAGACAAGCAGATTCGGTTACGAAGC
AGAGATTCGGGTGCTGCGACATGAGCTTGAATCGCGCGGTGTTCAGCCCG
TGTCATCTCACATTGCCGGCCCGGCCCAGCACGCTGGACCTTCTCAGGCT
CCGCCACCGGCCCTGGGTCACGGCCCTAGCAATCTGTTTGGTGGCATCAT
GACCAACCAAGGAGATGAAACAAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RCO1KJC3_003786Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003786-T1KJC3_003786-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003786-T1.cdsKJC3_003786-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003786-T1.utr3p1KJC3_003786-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003786-T1.exon7KJC3_003786-T1.exon7Aspergillus niger KJC3exon
KJC3_003786-T1.exon6KJC3_003786-T1.exon6Aspergillus niger KJC3exon
KJC3_003786-T1.exon5KJC3_003786-T1.exon5Aspergillus niger KJC3exon
KJC3_003786-T1.exon4KJC3_003786-T1.exon4Aspergillus niger KJC3exon
KJC3_003786-T1.exon3KJC3_003786-T1.exon3Aspergillus niger KJC3exon
KJC3_003786-T1.exon2KJC3_003786-T1.exon2Aspergillus niger KJC3exon
KJC3_003786-T1.exon1KJC3_003786-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003786-T1.utr5p1KJC3_003786-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF08581
DBxrefPFAM:PF12894
Producttranscriptional regulatory protein rco1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3035854..3040716 -
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