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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3065248..3068878+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003794-T1 ID=KJC3_003794-T1|Name=KJC3_003794-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3631bp|location=Sequence derived from alignment at ch3:3065248..3068878+ (Aspergillus niger KJC3)
CCTCGCTCCTACTTCTTTGTCGGTCTGTGGCTCTATCAGCCTGCTTGATT
TCCTTCGGAAACACCTGGACTTAATTGCTCGAACTTCCGACCTGGACGAG
CTTCATGGTCTCCATCACGACCGAGTACATCAGCGTCGGGGGCAATAGGC
ATCCCGCCGCCGCTGACTGGGACGTCCAGTCAGGCGTGCTTGCCTTTGGC
GCAGATAACAATGTTGCTCTCTGGGATCCCCGAGTAAGTTACTCCTCAAA
TATTTGCTTGGTTACTTTCAAGATGGTGGTGGTTGATGCTGATGGTGGGG
CCTTGGGTGATGATGTAGGAGAGCTCGCAGCGCGGGGTCTATTCGCTTCT
TGTCGGCCACACCGACAAGGTCAGTGTCGTTCGGTTCTACACATGCCCTT
CCACCGGCACGAAACTTCTCTTGACTGGTTCTGTTGATCATACGGTCCGG
TTATGGCGCCCCGATCCAGTAAATCCCCGCCAGTTCGTTCACGCGCATAC
TTTGGAAGGACATACCGGCTCAGTCAATACTATCGCCGTAGCTGAAGGAT
TAGACATTATCGCATCGGGCGCAGCTGATGCTAGTGTGAAGATATGGAAG
ATCAGCGCGCAGGGAGAGCCAAAGGGCGAACTCTTGGAATCCATTCCCAT
GAAGCCACGCTTCTTTCCGTTGGCTTTGGCATTGACCCCGCTCCAAACGG
AGTCGAACGATAGACCTGTGGCTTTCGCGGTGGCAGGGACCACCAACATT
GTGCAGATATATGCAGCAGAGAACACTCTTGTCGACCCCGATTTCAAGCT
TGCGGCTGTGCTGTCCGGACACGAGGCGTGGGTGCGCTCCTTGTCTTTCA
CATCGGATAAGCAAAGCAAGATGGGCGATTTGCTGTTGGCCTCGGCAAGC
CAAGACAAGTATGTTCGACTCTGGCGATTCCAACGTGGAGAGGTTACGCA
GGCCACGCCGGCGTGTGATGATGATCCTATGCTGGGTGGCTTCGAGCCCA
CGCTATCGAATAAGGCGCACCAGTTCACCGCGGCGGGGACCAAATACTCT
GTTACATTCGAAGCTCTCTTGTTCGGAAATGAGGATTGGATTTACACGAC
TGCGTGGAACCCTGACCCGGAGCGCCAGCAACTCCTCACTGCATCGGCAG
ACAACACATTGACCATTTGGGAACAAGATCCGGTTTCGGGAGTGTGGCTT
TCTGCCGAAAGAATGGGAGAGATCAGTGTTCAGAAAGGTTCCACTACAGC
TACTGGTAGTACTGGTGGGTTCTGGATTGGTCTTTGGGCCCCAGACGGCA
AGCAAGTCGTGAGTCTGGGCCGCACTGGAAGCTGGCGCTCGTGGAAGTAT
GATGCGGAAACCGATATGTGGGCGCAATCCTTGGGTATCTCAGGGCATGT
GCGGGCATCCAACGGGGTCCAATGGGAGCCTACTGGAGGATATCTCCTGT
CGACAAGTGCGGATCAAACGACACGTCTGCATGCTCAGTGGCTGCGTGAT
GGACTGAAGTCATGGCATGAATTTTCACGACCTCAGATTCATGGATACGA
TTTGAATTGCGTGGATACCCTGGGCCCGGCTCGGTTCGTGTCCGGCGCGG
AAGAAAAGCTACTGCGAGTATTTAACGAGCCTGCGCCTATCGCACAGCTC
CTAGAGAAGCTTTCGGGGTTCAAGCAGACGACCGAAGGGGCATTATCGGA
CACGGCACAGATTCCCGTCCTAGGACTGTCTAACCAGGCCCCGGCCGATG
ATGCGCCTACAGGTGAAGATGGAGTAGAGGGCGAGGAAGTTGGCAAAGCT
CAGGCCAATCAGGCGCTTTTGGCGGAATCGGAGCAACCGCCATTGGAAGA
CCAGCTCGCTCGCTACACATTATGGCCAGAGCATGAGAAGCTGTATGGTC
ACGGGTACGAGATCTCAGCCGTGGCTGTCAGCCACGACCGCACACTTATT
GCCACCGCTTGCAAGGCGAGCTCGATTGATCATGCCGTGGTGCGTCTGTA
CGACACGTCAGACTGGCACGAGATTCGTCCATCTCTTGCCGCGCACACCT
TGACCATTACTAGTCTCGCCTTCTCCAGTGACGACCAGTACCTTCTGAGT
GTCGGACGTGACCGGCAATGGGCTGTTTACGAACGCAGCGAACAGGACCC
CTCTACTTTCTCCCTTCTAATTTCGAACCCGAAGGGTCATTCCCGAATGA
TCCTCGATGCCGCATGGGCACCTGCGTCGGGAAAGCCCATCTTCGCAACC
GCCGGCCGGGACAAGTCAGTGAAGCTGTGGCAGAAGACCGAAGGCTCCTT
TGAGTGCAAATCCACCATCCCGCTGACAACGCCTGTCACTGCACTGGCGT
TCCTTCCGCAGATATATAGCAACTCCTTCTTCGTGGCCACGGGCGAGGAA
AGCGGAGCAGTGTCTGTCTACCGAGTCGCAGTCGACAGCCTGGAAGCCAG
CCAATTGTCAAGCATCGATAAGCTTGCATCTCCTTCGAAGGCGATCACGC
AGCTGTCCTGGCGGCCGGTACCGGATGTAGATACACGGGATTTTGCACTG
GCGGTAGCAAGTGAGGACACTTCAACTCGGATATATAGTTTCTCGGACAT
GGTCTCATAACCAAAAAGGCCGTATATGTACAGAACCAAAAACTAAATGG
GCAGAAAACCGAAGTTATAATACCATGGGTTGAAATCGTGCACAAATGTT
GAAAGCCCGGACTCCTTAAATGTTGAATATATCCCTTCCGGGTCCTGAAA
TCCTTCTAGAAACACAAATAGTTGAATGATGCTCCGAACCCCTGCTATGC
ATATCCAGTATAGTGGTTGTTGAACCAATCATGTTGAACGATGCCAAAGA
AAGAACTTAATAAGAGCAGATGAAACAGGTGAAAAAGCGGATGGGATTGA
GGAGAGGCGCACTCGCATGTCATCACGCAGCAGGCCGCTTTTCCAAGCCA
TACCCGCCCAAACCCTCCAGCGACGGGTAAGTCTTAGCCTGACTGGTGAA
CCCATTTCTCGGACCCCTAGAATGCAAGTCCTCTTTGAGCCATTTCAGCA
CAAGCTCACCGAGCTGACTATTTTCGGAGGTCTCCTTAACCTCTTCGCGG
AACTTCTCAATGGGACCCCACTGACGCACGCTTCCCAAATGCATATGGAC
TAGATGCGTAGGCCACAGCGACAAGTTATCCAAGATATGGGTCGCATAGA
CGATAGTACAGGGTCTGGTCTCAGTCTCACGCTTAAGAAAGGCCAGGAAA
TTGGAGCGAGAGAGGAGGTCCAAATCGACAGTGATTTCATCCAGAAGGAG
GACTTGCCAGGGCCGGAGGAGGCCCATAGCTAGCTGGACGCGGCGACGTT
CGCCGTCCGAAACGGCATGCATGCGCCAGCGGAGATCGATGTCTAGGATG
TCGACGAGTTCATCCCGGCGGTCAGGGTATGCGTTGCCGCCGACGGAGGC
GAGGAGGGTAGGGACGTCGATGTCGGTGCGGACGATGTTGTTGAGAACCC
ATTCCATGCCGAGGTAGGTTACGCCTTCCAGGCCGTCCTTGAAGGGGTCT
TTGCCTGCTACGGTGATGGTGTCTGTAGGAGCTAGACGTTTGCCTGCTAG
GAGGCGGAGGAGGGTGGTCTTGCCTGCGCCA back to topCoding sequence (CDS) from alignment at ch3:3065248..3068878+ >KJC3_003794-T1 ID=KJC3_003794-T1|Name=KJC3_003794-T1|organism=Aspergillus niger KJC3|type=CDS|length=4842bp|location=Sequence derived from alignment at ch3:3065248..3068878+ (Aspergillus niger KJC3)
ATGGTCTCCATCACGACCGAGTACATCAGCGTCGGGGGCAATAGGCATCC
CGCCGCCGCTGACTGGGACGTCCAGTCAGGCGTGCTTGCCTTTGGCGCAG
ATAACAATGTTGCTCTCTGGGATCCCCGAGAGAGCTCGCAGCGCGGGGTC
TATTCGCTTCTTGTCGGCCACACCGACAAGGTCAGTGTCGTTCGGTTCTA
CACATGCCCTTCCACCGGCACGAAACTTCTCTTGACTGGTTCTGTTGATC
ATACGGTCCGGTTATGGCGCCCCGATCCAGTAAATCCCCGCCAGTTCGTT
CACGCGCATACTTTGGAAGGACATACCGGCTCAGTCAATACTATCGCCGT
AGCTGAAGGATTAGACATTATCGCATCGGGCGCAGCTGATGCTAGTGTGA
AGATATGGAAGATCAGCGCGCAGGGAGAGCCAAAGGGCGAACTCTTGGAA
TCCATTCCCATGAAGCCACGCTTCTTTCCGTTGGCTTTGGCATTGACCCC
GCTCCAAACGGAGTCGAACGATAGACCTGTGGCTTTCGCGGTGGCAGGGA
CCACCAACATTGTGCAGATATATGCAGCAGAGAACACTCTTGTCGACCCC
GATTTCAAGCTTGCGGCTGTGCTGTCCGGACACGAGGCGTGGGTGCGCTC
CTTGTCTTTCACATCGGATAAGCAAAGCAAGATGGGCGATTTGCTGTTGG
CCTCGGCAAGCCAAGACAAGTATGTTCGACTCTGGCGATTCCAACGTGGA
GAGGTTACGCAGGCCACGCCGGCGTGTGATGATGATCCTATGCTGGGTGG
CTTCGAGCCCACGCTATCGAATAAGGCGCACCAGTTCACCGCGGCGGGGA
CCAAATACTCTGTTACATTCGAAGCTCTCTTGTTCGGAAATGAGGATTGG
ATTTACACGACTGCGTGGAACCCTGACCCGGAGCGCCAGCAACTCCTCAC
TGCATCGGCAGACAACACATTGACCATTTGGGAACAAGATCCGGTTTCGG
GAGTGTGGCTTTCTGCCGAAAGAATGGGAGAGATCAGTGTTCAGAAAGGT
TCCACTACAGCTACTGGTAGTACTGGTGGGTTCTGGATTGGTCTTTGGGC
CCCAGACGGCAAGCAAGTCGTGAGTCTGGGCCGCACTGGAAGCTGGCGCT
CGTGGAAGTATGATGCGGAAACCGATATGTGGGCGCAATCCTTGGGTATC
TCAGGGCATGTGCGGGCATCCAACGGGGTCCAATGGGAGCCTACTGGAGG
ATATCTCCTGTCGACAAGTGCGGATCAAACGACACGTCTGCATGCTCAGT
GGCTGCGTGATGGACTGAAGTCATGGCATGAATTTTCACGACCTCAGATT
CATGGATACGATTTGAATTGCGTGGATACCCTGGGCCCGGCTCGGTTCGT
GTCCGGCGCGGAAGAAAAGCTACTGCGAGTATTTAACGAGCCTGCGCCTA
TCGCACAGCTCCTAGAGAAGCTTTCGGGGTTCAAGCAGACGACCGAAGGG
GCATTATCGGACACGGCACAGATTCCCGTCCTAGGACTGTCTAACCAGGC
CCCGGCCGATGATGCGCCTACAGGTGAAGATGGAGTAGAGGGCGAGGAAG
TTGGCAAAGCTCAGGCCAATCAGGCGCTTTTGGCGGAATCGGAGCAACCG
CCATTGGAAGACCAGCTCGCTCGCTACACATTATGGCCAGAGCATGAGAA
GCTGTATGGTCACGGGTACGAGATCTCAGCCGTGGCTGTCAGCCACGACC
GCACACTTATTGCCACCGCTTGCAAGGCGAGCTCGATTGATCATGCCGTG
GTGCGTCTGTACGACACGTCAGACTGGCACGAGATTCGTCCATCTCTTGC
CGCGCACACCTTGACCATTACTAGTCTCGCCTTCTCCAGTGACGACCAGT
ACCTTCTGAGTGTCGGACGTGACCGGCAATGGGCTGTTTACGAACGCAGC
GAACAGGACCCCTCTACTTTCTCCCTTCTAATTTCGAACCCGAAGGGTCA
TTCCCGAATGATCCTCGATGCCGCATGGGCACCTGCGTCGGGAAAGCCCA
TCTTCGCAACCGCCGGCCGGGACAAGTCAGTGAAGCTGTGGCAGAAGACC
GAAGGCTCCTTTGAGTGCAAATCCACCATCCCGCTGACAACGCCTGTCAC
TGCACTGGCGTTCCTTCCGCAGATATATAGCAACTCCTTCTTCGTGGCCA
CGGGCGAGGAAAGCGGAGCAGTGTCTGTCTACCGAGTCGCAGTCGACAGC
CTGGAAGCCAGCCAATTGTCAAGCATCGATAAGCTTGCATCTCCTTCGAA
GGCGATCACGCAGCTGTCCTGGCGGCCGGTACCGGATGTAGATACACGGG
ATTTTGCACTGGCGGTAGCAAGTGAGGACACTTCAACTCGGATATATAGT
TTCTCGGACATGGTCTCATAAATGGTCTCCATCACGACCGAGTACATCAG
CGTCGGGGGCAATAGGCATCCCGCCGCCGCTGACTGGGACGTCCAGTCAG
GCGTGCTTGCCTTTGGCGCAGATAACAATGTTGCTCTCTGGGATCCCCGA
GAGAGCTCGCAGCGCGGGGTCTATTCGCTTCTTGTCGGCCACACCGACAA
GGTCAGTGTCGTTCGGTTCTACACATGCCCTTCCACCGGCACGAAACTTC
TCTTGACTGGTTCTGTTGATCATACGGTCCGGTTATGGCGCCCCGATCCA
GTAAATCCCCGCCAGTTCGTTCACGCGCATACTTTGGAAGGACATACCGG
CTCAGTCAATACTATCGCCGTAGCTGAAGGATTAGACATTATCGCATCGG
GCGCAGCTGATGCTAGTGTGAAGATATGGAAGATCAGCGCGCAGGGAGAG
CCAAAGGGCGAACTCTTGGAATCCATTCCCATGAAGCCACGCTTCTTTCC
GTTGGCTTTGGCATTGACCCCGCTCCAAACGGAGTCGAACGATAGACCTG
TGGCTTTCGCGGTGGCAGGGACCACCAACATTGTGCAGATATATGCAGCA
GAGAACACTCTTGTCGACCCCGATTTCAAGCTTGCGGCTGTGCTGTCCGG
ACACGAGGCGTGGGTGCGCTCCTTGTCTTTCACATCGGATAAGCAAAGCA
AGATGGGCGATTTGCTGTTGGCCTCGGCAAGCCAAGACAAGTATGTTCGA
CTCTGGCGATTCCAACGTGGAGAGGTTACGCAGGCCACGCCGGCGTGTGA
TGATGATCCTATGCTGGGTGGCTTCGAGCCCACGCTATCGAATAAGGCGC
ACCAGTTCACCGCGGCGGGGACCAAATACTCTGTTACATTCGAAGCTCTC
TTGTTCGGAAATGAGGATTGGATTTACACGACTGCGTGGAACCCTGACCC
GGAGCGCCAGCAACTCCTCACTGCATCGGCAGACAACACATTGACCATTT
GGGAACAAGATCCGGTTTCGGGAGTGTGGCTTTCTGCCGAAAGAATGGGA
GAGATCAGTGTTCAGAAAGGTTCCACTACAGCTACTGGTAGTACTGGTGG
GTTCTGGATTGGTCTTTGGGCCCCAGACGGCAAGCAAGTCGTGAGTCTGG
GCCGCACTGGAAGCTGGCGCTCGTGGAAGTATGATGCGGAAACCGATATG
TGGGCGCAATCCTTGGGTATCTCAGGGCATGTGCGGGCATCCAACGGGGT
CCAATGGGAGCCTACTGGAGGATATCTCCTGTCGACAAGTGCGGATCAAA
CGACACGTCTGCATGCTCAGTGGCTGCGTGATGGACTGAAGTCATGGCAT
GAATTTTCACGACCTCAGATTCATGGATACGATTTGAATTGCGTGGATAC
CCTGGGCCCGGCTCGGTTCGTGTCCGGCGCGGAAGAAAAGCTACTGCGAG
TATTTAACGAGCCTGCGCCTATCGCACAGCTCCTAGAGAAGCTTTCGGGG
TTCAAGCAGACGACCGAAGGGGCATTATCGGACACGGCACAGATTCCCGT
CCTAGGACTGTCTAACCAGGCCCCGGCCGATGATGCGCCTACAGGTGAAG
ATGGAGTAGAGGGCGAGGAAGTTGGCAAAGCTCAGGCCAATCAGGCGCTT
TTGGCGGAATCGGAGCAACCGCCATTGGAAGACCAGCTCGCTCGCTACAC
ATTATGGCCAGAGCATGAGAAGCTGTATGGTCACGGGTACGAGATCTCAG
CCGTGGCTGTCAGCCACGACCGCACACTTATTGCCACCGCTTGCAAGGCG
AGCTCGATTGATCATGCCGTGGTGCGTCTGTACGACACGTCAGACTGGCA
CGAGATTCGTCCATCTCTTGCCGCGCACACCTTGACCATTACTAGTCTCG
CCTTCTCCAGTGACGACCAGTACCTTCTGAGTGTCGGACGTGACCGGCAA
TGGGCTGTTTACGAACGCAGCGAACAGGACCCCTCTACTTTCTCCCTTCT
AATTTCGAACCCGAAGGGTCATTCCCGAATGATCCTCGATGCCGCATGGG
CACCTGCGTCGGGAAAGCCCATCTTCGCAACCGCCGGCCGGGACAAGTCA
GTGAAGCTGTGGCAGAAGACCGAAGGCTCCTTTGAGTGCAAATCCACCAT
CCCGCTGACAACGCCTGTCACTGCACTGGCGTTCCTTCCGCAGATATATA
GCAACTCCTTCTTCGTGGCCACGGGCGAGGAAAGCGGAGCAGTGTCTGTC
TACCGAGTCGCAGTCGACAGCCTGGAAGCCAGCCAATTGTCAAGCATCGA
TAAGCTTGCATCTCCTTCGAAGGCGATCACGCAGCTGTCCTGGCGGCCGG
TACCGGATGTAGATACACGGGATTTTGCACTGGCGGTAGCAAGTGAGGAC
ACTTCAACTCGGATATATAGTTTCTCGGACATGGTCTCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003794-T1.utr5p1 | KJC3_003794-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003794-T1.utr3p1 | KJC3_003794-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3065248..3068878 + |
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