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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3127303..3129766- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003816-T1 ID=KJC3_003816-T1|Name=KJC3_003816-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2464bp|location=Sequence derived from alignment at ch3:3127303..3129766- (Aspergillus niger KJC3)
AGCCCTTCAACCATTTCATCTCTGGGCTCGATGTCGTGCCGACACAGTTA
AGTATCGGCCTTGGTGACTTAAACTTTTTCCTTTTCTTGTTACTGCCCGT
TCTTTGCGGCGATTTGCATCCACCATGTTACCATTTATCAATCAAAGTAT
GTTGTGAACCTTCCGTCGCAGCACTTGAGAATGCGCGCCCCTCTTTCCTG
CGTGAAGATCATGCTAAAAGGCTCTCTTTCTAGTCTTTGAGTATCCAGCC
AATGCGACTGGAGCTTCGATTGATGAGCGTATGCCTCTCCCTCCCCGTCC
TGGCCCTTCTTCGTCCCCCGAATCAGTCCCTCACCGCTGAACAGTGAAGC
TCATTGCGTCATTCCTCCTCTCCTACCCCCTCGCCGGTCTGTTGAAGAGA
ATCCCCGACGCTCAACCCTGGAAGAAGAATGCCTTCATCATTGCCGTTTC
CTTGTTCTATCTCGTTGGCCTTTTCGACCTATGGGATGGCCTTCGCACTT
TGTTCTATAGCGCCGCCGGTACCTATCTGATCGCCTACTACATTGATGGA
TCGTTGATGCCCTGGATCGGCTTCATCTTCTTGATGGGCCACATGTCCAT
CAGCCACATCTACCGCCAGATCGTCAACGATCCTCAAGCGATTGATATCA
CTGGTGCCCAGATGGTCCTGGTCATGAAGCTCACGTCTTTCTGTTGGAAC
GTTCATGATGGTCGACTTCCCCAAAACCAGCTATCAGATCCTCAAAAATA
TGCCGCGATTACGCATTTTCCGAGCATCCTGGACTACATGGGCTACGTGC
TATTCTTCCCGGCTCTTTTCGGTGGTCCGTCCTTTGAATACGTCGACTAC
CGTCGCTGGCTCGACACTACTCTTTTCGAAGTCCCCCCGGGTACCGACCC
GTCGAAGGTGCCCCCGACCCGTAAGAAGCGCAAGATCCCTCGCAGTGGAA
CTCCTGCCACGAAGAAGGCCCTGGTTGGACTGGCATGGATCCTGGCATTC
CTACAGCTGGGGTCTTACTACAATCAAGAAACCATCCTGAGTCCCAGATA
CATGGGCTACTCCTTCCCTCGACGGGTCTGGATCATGCACATGGTCGGGC
TAACCGCACGCCTCAAGTACTACGGCGTCTGGTCCCTGACGGAAGGTGCT
TGTATCCTGTCTGGCATGGGATACAATGGCTTCGATCCCAAGTCCGGCAA
GGTCTTCTGGAACCGGTTGGAGAATATCGATCCCTGGAGTCTTGAGACCG
CGCAAAACTCCCACGGATATCTGGGCAGCTGGAACAAGAACACCAACCAT
TGGCTGCGAAACTATGTCTATTTGCGCGTCACCCCCAGGGGAAAGAAGCC
GGGCTTCCGCGCCAGCTTGGCCACGTTTACGACCAGCGCTTTCTGGCATG
GTTTCTACCCGGGATACTATCTGACATTCATCCTTGGATCGTTCATCCAG
ACGGGAGCCAAGAGTGAGTTCACCTGGTTAACCCACCCGTGCATTGATTT
CCCGTACTGACAATGCGCAGACTTCCGTCGTTATGTACGCCCGTTCTTCC
TCACTCCGGACGGGAGCAAGCCGACTCCCTACAAGCGCTACTATGACATT
ATGAGCTGGTTCGTGACTCAAGTCACCCTGTCCTTCACGGTGATGCCCTT
CATCTTCCTCGGATTTAGCAAGTCCATCGGCGTTTGGCAGAGCGTCTACT
TCTACGGGATCGTCGGCAACCTCCTCAGCATTGCCTTCTTTGCCAGCCCC
GCCAAGGGCATCCTCATCAAGAAGCTCAAGGCCCGCAACCGGCCTCATGT
TACACGCTCAACCAGCTCCGACACCCTGCAACAGCCAACACTAGGTCTTC
CAAGTGACGCTGTTCAGGCCTTTGATGAGGCCGTGCAGGAGATCCGGGGT
GAAATTGAAGCCAGGCGCAGACGCGGCAGTGCCGTTACCATGCCGACTGG
AGAAGAGCTGAAAGCAGTCGTGGAAAGCAAGATTGGCCGCAAGCTCACAT
GATCATCTGGATCCTGTGACTTCCTATGTGACCCAAATCCAAAAAAAAAA
AAAAAAAAAGGGGTCTTAAGACTCCAGGTCTCAGGACCTGCTACCAGTCT
GGCTTAGAGCCAACTAATTCGACACGTGTGAATGAGAACGATTGATGGGG
TTGACGATAGAATGTATATTAGACTTTTTACTGCTCCGAAGCGGCTGCGC
ATACTTGTCTCGTTGTTGGTGCTCCTTTGGGATGAGTGGCATCCTTATGA
TTCTTATTCTTCTATTATGTATGCTTTCCGGCGCTGACGTACACTTTCAA
TTCGTTCATACTTATATGCTACGAAGTCTCCGACAATAAGCGTAATGAGC
AAGTCTTACTTTCTTTTGCTTAGTTGAAGCCAGACGAGTATTTTCAGCAA
CTTCCTGTTCTCTTCAGTCTGACGGAATTGTCTATAATCATACCAATTAA
CAATGAGTCTACAG back to topCoding sequence (CDS) from alignment at ch3:3127303..3129766- >KJC3_003816-T1 ID=KJC3_003816-T1|Name=KJC3_003816-T1|organism=Aspergillus niger KJC3|type=CDS|length=6672bp|location=Sequence derived from alignment at ch3:3127303..3129766- (Aspergillus niger KJC3)
ACTTCCGTCGTTATGTACGCCCGTTCTTCCTCACTCCGGACGGGAGCAAG
CCGACTCCCTACAAGCGCTACTATGACATTATGAGCTGGTTCGTGACTCA
AGTCACCCTGTCCTTCACGGTGATGCCCTTCATCTTCCTCGGATTTAGCA
AGTCCATCGGCGTTTGGCAGAGCGTCTACTTCTACGGGATCGTCGGCAAC
CTCCTCAGCATTGCCTTCTTTGCCAGCCCCGCCAAGGGCATCCTCATCAA
GAAGCTCAAGGCCCGCAACCGGCCTCATGTTACACGCTCAACCAGCTCCG
ACACCCTGCAACAGCCAACACTAGGTCTTCCAAGTGACGCTGTTCAGGCC
TTTGATGAGGCCGTGCAGGAGATCCGGGGTGAAATTGAAGCCAGGCGCAG
ACGCGGCAGTGCCGTTACCATGCCGACTGGAGAAGAGCTGAAAGCAGTCG
TGGAAAGCAAGATTGGCCGCAAGCTCACATGATGAAGCTCATTGCGTCAT
TCCTCCTCTCCTACCCCCTCGCCGGTCTGTTGAAGAGAATCCCCGACGCT
CAACCCTGGAAGAAGAATGCCTTCATCATTGCCGTTTCCTTGTTCTATCT
CGTTGGCCTTTTCGACCTATGGGATGGCCTTCGCACTTTGTTCTATAGCG
CCGCCGGTACCTATCTGATCGCCTACTACATTGATGGATCGTTGATGCCC
TGGATCGGCTTCATCTTCTTGATGGGCCACATGTCCATCAGCCACATCTA
CCGCCAGATCGTCAACGATCCTCAAGCGATTGATATCACTGGTGCCCAGA
TGGTCCTGGTCATGAAGCTCACGTCTTTCTGTTGGAACGTTCATGATGGT
CGACTTCCCCAAAACCAGCTATCAGATCCTCAAAAATATGCCGCGATTAC
GCATTTTCCGAGCATCCTGGACTACATGGGCTACGTGCTATTCTTCCCGG
CTCTTTTCGGTGGTCCGTCCTTTGAATACGTCGACTACCGTCGCTGGCTC
GACACTACTCTTTTCGAAGTCCCCCCGGGTACCGACCCGTCGAAGGTGCC
CCCGACCCGTAAGAAGCGCAAGATCCCTCGCAGTGGAACTCCTGCCACGA
AGAAGGCCCTGGTTGGACTGGCATGGATCCTGGCATTCCTACAGCTGGGG
TCTTACTACAATCAAGAAACCATCCTGAGTCCCAGATACATGGGCTACTC
CTTCCCTCGACGGGTCTGGATCATGCACATGGTCGGGCTAACCGCACGCC
TCAAGTACTACGGCGTCTGGTCCCTGACGGAAGGTGCTTGTATCCTGTCT
GGCATGGGATACAATGGCTTCGATCCCAAGTCCGGCAAGGTCTTCTGGAA
CCGGTTGGAGAATATCGATCCCTGGAGTCTTGAGACCGCGCAAAACTCCC
ACGGATATCTGGGCAGCTGGAACAAGAACACCAACCATTGGCTGCGAAAC
TATGTCTATTTGCGCGTCACCCCCAGGGGAAAGAAGCCGGGCTTCCGCGC
CAGCTTGGCCACGTTTACGACCAGCGCTTTCTGGCATGGTTTCTACCCGG
GATACTATCTGACATTCATCCTTGGATCGTTCATCCAGACGGGAGCCAAG
ATCTTTGAGTATCCAGCCAATGCGACTGGAGCTTCGATTGATGAGCATGT
TACCATTTATCAATCAAAACTTCCGTCGTTATGTACGCCCGTTCTTCCTC
ACTCCGGACGGGAGCAAGCCGACTCCCTACAAGCGCTACTATGACATTAT
GAGCTGGTTCGTGACTCAAGTCACCCTGTCCTTCACGGTGATGCCCTTCA
TCTTCCTCGGATTTAGCAAGTCCATCGGCGTTTGGCAGAGCGTCTACTTC
TACGGGATCGTCGGCAACCTCCTCAGCATTGCCTTCTTTGCCAGCCCCGC
CAAGGGCATCCTCATCAAGAAGCTCAAGGCCCGCAACCGGCCTCATGTTA
CACGCTCAACCAGCTCCGACACCCTGCAACAGCCAACACTAGGTCTTCCA
AGTGACGCTGTTCAGGCCTTTGATGAGGCCGTGCAGGAGATCCGGGGTGA
AATTGAAGCCAGGCGCAGACGCGGCAGTGCCGTTACCATGCCGACTGGAG
AAGAGCTGAAAGCAGTCGTGGAAAGCAAGATTGGCCGCAAGCTCACATGA
TGAAGCTCATTGCGTCATTCCTCCTCTCCTACCCCCTCGCCGGTCTGTTG
AAGAGAATCCCCGACGCTCAACCCTGGAAGAAGAATGCCTTCATCATTGC
CGTTTCCTTGTTCTATCTCGTTGGCCTTTTCGACCTATGGGATGGCCTTC
GCACTTTGTTCTATAGCGCCGCCGGTACCTATCTGATCGCCTACTACATT
GATGGATCGTTGATGCCCTGGATCGGCTTCATCTTCTTGATGGGCCACAT
GTCCATCAGCCACATCTACCGCCAGATCGTCAACGATCCTCAAGCGATTG
ATATCACTGGTGCCCAGATGGTCCTGGTCATGAAGCTCACGTCTTTCTGT
TGGAACGTTCATGATGGTCGACTTCCCCAAAACCAGCTATCAGATCCTCA
AAAATATGCCGCGATTACGCATTTTCCGAGCATCCTGGACTACATGGGCT
ACGTGCTATTCTTCCCGGCTCTTTTCGGTGGTCCGTCCTTTGAATACGTC
GACTACCGTCGCTGGCTCGACACTACTCTTTTCGAAGTCCCCCCGGGTAC
CGACCCGTCGAAGGTGCCCCCGACCCGTAAGAAGCGCAAGATCCCTCGCA
GTGGAACTCCTGCCACGAAGAAGGCCCTGGTTGGACTGGCATGGATCCTG
GCATTCCTACAGCTGGGGTCTTACTACAATCAAGAAACCATCCTGAGTCC
CAGATACATGGGCTACTCCTTCCCTCGACGGGTCTGGATCATGCACATGG
TCGGGCTAACCGCACGCCTCAAGTACTACGGCGTCTGGTCCCTGACGGAA
GGTGCTTGTATCCTGTCTGGCATGGGATACAATGGCTTCGATCCCAAGTC
CGGCAAGGTCTTCTGGAACCGGTTGGAGAATATCGATCCCTGGAGTCTTG
AGACCGCGCAAAACTCCCACGGATATCTGGGCAGCTGGAACAAGAACACC
AACCATTGGCTGCGAAACTATGTCTATTTGCGCGTCACCCCCAGGGGAAA
GAAGCCGGGCTTCCGCGCCAGCTTGGCCACGTTTACGACCAGCGCTTTCT
GGCATGGTTTCTACCCGGGATACTATCTGACATTCATCCTTGGATCGTTC
ATCCAGACGGGAGCCAAGATCTTTGAGTATCCAGCCAATGCGACTGGAGC
TTCGATTGATGAGCATGTTACCATTTATCAATCAAAACTTCCGTCGTTAT
GTACGCCCGTTCTTCCTCACTCCGGACGGGAGCAAGCCGACTCCCTACAA
GCGCTACTATGACATTATGAGCTGGTTCGTGACTCAAGTCACCCTGTCCT
TCACGGTGATGCCCTTCATCTTCCTCGGATTTAGCAAGTCCATCGGCGTT
TGGCAGAGCGTCTACTTCTACGGGATCGTCGGCAACCTCCTCAGCATTGC
CTTCTTTGCCAGCCCCGCCAAGGGCATCCTCATCAAGAAGCTCAAGGCCC
GCAACCGGCCTCATGTTACACGCTCAACCAGCTCCGACACCCTGCAACAG
CCAACACTAGGTCTTCCAAGTGACGCTGTTCAGGCCTTTGATGAGGCCGT
GCAGGAGATCCGGGGTGAAATTGAAGCCAGGCGCAGACGCGGCAGTGCCG
TTACCATGCCGACTGGAGAAGAGCTGAAAGCAGTCGTGGAAAGCAAGATT
GGCCGCAAGCTCACATGATGAAGCTCATTGCGTCATTCCTCCTCTCCTAC
CCCCTCGCCGGTCTGTTGAAGAGAATCCCCGACGCTCAACCCTGGAAGAA
GAATGCCTTCATCATTGCCGTTTCCTTGTTCTATCTCGTTGGCCTTTTCG
ACCTATGGGATGGCCTTCGCACTTTGTTCTATAGCGCCGCCGGTACCTAT
CTGATCGCCTACTACATTGATGGATCGTTGATGCCCTGGATCGGCTTCAT
CTTCTTGATGGGCCACATGTCCATCAGCCACATCTACCGCCAGATCGTCA
ACGATCCTCAAGCGATTGATATCACTGGTGCCCAGATGGTCCTGGTCATG
AAGCTCACGTCTTTCTGTTGGAACGTTCATGATGGTCGACTTCCCCAAAA
CCAGCTATCAGATCCTCAAAAATATGCCGCGATTACGCATTTTCCGAGCA
TCCTGGACTACATGGGCTACGTGCTATTCTTCCCGGCTCTTTTCGGTGGT
CCGTCCTTTGAATACGTCGACTACCGTCGCTGGCTCGACACTACTCTTTT
CGAAGTCCCCCCGGGTACCGACCCGTCGAAGGTGCCCCCGACCCGTAAGA
AGCGCAAGATCCCTCGCAGTGGAACTCCTGCCACGAAGAAGGCCCTGGTT
GGACTGGCATGGATCCTGGCATTCCTACAGCTGGGGTCTTACTACAATCA
AGAAACCATCCTGAGTCCCAGATACATGGGCTACTCCTTCCCTCGACGGG
TCTGGATCATGCACATGGTCGGGCTAACCGCACGCCTCAAGTACTACGGC
GTCTGGTCCCTGACGGAAGGTGCTTGTATCCTGTCTGGCATGGGATACAA
TGGCTTCGATCCCAAGTCCGGCAAGGTCTTCTGGAACCGGTTGGAGAATA
TCGATCCCTGGAGTCTTGAGACCGCGCAAAACTCCCACGGATATCTGGGC
AGCTGGAACAAGAACACCAACCATTGGCTGCGAAACTATGTCTATTTGCG
CGTCACCCCCAGGGGAAAGAAGCCGGGCTTCCGCGCCAGCTTGGCCACGT
TTACGACCAGCGCTTTCTGGCATGGTTTCTACCCGGGATACTATCTGACA
TTCATCCTTGGATCGTTCATCCAGACGGGAGCCAAGATCTTTGAGTATCC
AGCCAATGCGACTGGAGCTTCGATTGATGAGCATGTTACCATTTATCAAT
CAAAACTTCCGTCGTTATGTACGCCCGTTCTTCCTCACTCCGGACGGGAG
CAAGCCGACTCCCTACAAGCGCTACTATGACATTATGAGCTGGTTCGTGA
CTCAAGTCACCCTGTCCTTCACGGTGATGCCCTTCATCTTCCTCGGATTT
AGCAAGTCCATCGGCGTTTGGCAGAGCGTCTACTTCTACGGGATCGTCGG
CAACCTCCTCAGCATTGCCTTCTTTGCCAGCCCCGCCAAGGGCATCCTCA
TCAAGAAGCTCAAGGCCCGCAACCGGCCTCATGTTACACGCTCAACCAGC
TCCGACACCCTGCAACAGCCAACACTAGGTCTTCCAAGTGACGCTGTTCA
GGCCTTTGATGAGGCCGTGCAGGAGATCCGGGGTGAAATTGAAGCCAGGC
GCAGACGCGGCAGTGCCGTTACCATGCCGACTGGAGAAGAGCTGAAAGCA
GTCGTGGAAAGCAAGATTGGCCGCAAGCTCACATGATGAAGCTCATTGCG
TCATTCCTCCTCTCCTACCCCCTCGCCGGTCTGTTGAAGAGAATCCCCGA
CGCTCAACCCTGGAAGAAGAATGCCTTCATCATTGCCGTTTCCTTGTTCT
ATCTCGTTGGCCTTTTCGACCTATGGGATGGCCTTCGCACTTTGTTCTAT
AGCGCCGCCGGTACCTATCTGATCGCCTACTACATTGATGGATCGTTGAT
GCCCTGGATCGGCTTCATCTTCTTGATGGGCCACATGTCCATCAGCCACA
TCTACCGCCAGATCGTCAACGATCCTCAAGCGATTGATATCACTGGTGCC
CAGATGGTCCTGGTCATGAAGCTCACGTCTTTCTGTTGGAACGTTCATGA
TGGTCGACTTCCCCAAAACCAGCTATCAGATCCTCAAAAATATGCCGCGA
TTACGCATTTTCCGAGCATCCTGGACTACATGGGCTACGTGCTATTCTTC
CCGGCTCTTTTCGGTGGTCCGTCCTTTGAATACGTCGACTACCGTCGCTG
GCTCGACACTACTCTTTTCGAAGTCCCCCCGGGTACCGACCCGTCGAAGG
TGCCCCCGACCCGTAAGAAGCGCAAGATCCCTCGCAGTGGAACTCCTGCC
ACGAAGAAGGCCCTGGTTGGACTGGCATGGATCCTGGCATTCCTACAGCT
GGGGTCTTACTACAATCAAGAAACCATCCTGAGTCCCAGATACATGGGCT
ACTCCTTCCCTCGACGGGTCTGGATCATGCACATGGTCGGGCTAACCGCA
CGCCTCAAGTACTACGGCGTCTGGTCCCTGACGGAAGGTGCTTGTATCCT
GTCTGGCATGGGATACAATGGCTTCGATCCCAAGTCCGGCAAGGTCTTCT
GGAACCGGTTGGAGAATATCGATCCCTGGAGTCTTGAGACCGCGCAAAAC
TCCCACGGATATCTGGGCAGCTGGAACAAGAACACCAACCATTGGCTGCG
AAACTATGTCTATTTGCGCGTCACCCCCAGGGGAAAGAAGCCGGGCTTCC
GCGCCAGCTTGGCCACGTTTACGACCAGCGCTTTCTGGCATGGTTTCTAC
CCGGGATACTATCTGACATTCATCCTTGGATCGTTCATCCAGACGGGAGC
CAAGATCTTTGAGTATCCAGCCAATGCGACTGGAGCTTCGATTGATGAGC
ATGTTACCATTTATCAATCAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003816-T1.utr3p1 | KJC3_003816-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003816-T1.utr5p1 | KJC3_003816-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926251E |
| DBxref | InterPro:IPR004299 |
| DBxref | PFAM:PF03062 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3127303..3129766 - |
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