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KJC3_003817-T2, KJC3_003817-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003817-T2
Unique NameKJC3_003817-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3129875..3132269+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003817-T2 ID=KJC3_003817-T2|Name=KJC3_003817-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2395bp|location=Sequence derived from alignment at ch3:3129875..3132269+ (Aspergillus niger KJC3)
TGCGTGTCTCAACCAATCCACCCGCCCTCCAAGTCAACTCACCCTCCTCT
GATCTACCACATTTTGGATGCTGATGTATCATCTCCCGTTTCCGATCTTG
AGAGTCTAGAATCATTTCCACGGATCTGCTAGACCAACCTTCTTCGTTTT
CCTCCTCTTGCCCCTCTCTCCACACCTCACCCCCTCATTCAACATGGATG
TCGTCGCGGCGGTGTCGGGTTACATCTCCAAGATGGTCACCGCGGGGGAC
CCTTCGCCGACAGGTGGTTCCAGCTCTTCATCGGCCAAGATGAAGATATT
GCTTCTCGACAGTGAGACAGTGGGACTTGCGATTCTCTCATTGATCCCTG
TGGAAGCTGTGCGCTAATCCAACGGCTCCAGGTACCCATTGTGTCCACCG
CCATCACCCAGTCCGCTTTGTTGAACCATGAAGTCTACCTCATCGATCGC
CTCGATAATGCCGCTCGCGAACGTATGCGACATCTCCGCTGCCTTTGTTT
CGTGCGCCCTTCCCCCACCTCCGTTCAATTCCTGATCGACGAGCTCCGCG
AGCCCAAGTACGGAGAATACTACATCTACCTCACCAATATTATTCGCAAA
TCCTCCCTCGAACGTCTCGCCGAAGCGGATTCCCACGAGGTAGTTCGCGT
GGTGCAGGAACACTTTGCCGACTTCCTTGTGATCAATCCGGATCTCTGTT
CCCTGAATTTGGGCTTCCCACAGCAGCGCTTGTGGAGCCAGTCGCCAGAT
CTGTGGAATGCGGATGCCTTACAAAGAGCAACGGAGGGGGTCATTGCCAT
GTTGTTGGCGCTGAAGAAGAATCCGCTGATCCGTTACGAAAAGAACAGTC
TGCTAGCGAAGAAGTTGGCCACAGAGGTCCGCTATCAAGTGACGCAGGAA
GAGCAGCTCTTCAATTTCCGCAAGACCGATACACCCCCGATCCTGTTGAT
TTTGGACCGTAGAGACGACCCCATCACTCCGCTACTGACCCAGTGGACCT
ACCAAGCGATGGTGCATGAGTTGATGGGCATTCACAATGGGCGCGTGGAC
CTCCGGGACGTACCGGAGATTCGACCGGAATTGCGTGAAATCGTCCTTTC
CCAGGATCAAGATCCGTTCTTCAAGAAGAATATGTACCAGAACTTTGGTG
ATCTAGGCCAGAACATCAAGGAGTATGTTGAGCAGTACCAGGTCAAAACG
CAAAACACGATGAACATCGAGTCGATTGCGGACATGAAGCGCTTCGTGGA
GGACTATCCCGAGTTTCGTAAACTATCGGGCAATGTGAGTAAACATGTCA
CACTAGTGGGGGAGCTGAGTCGGCGCGTGGGTGAGGATGACCTGCTCGAC
GTCAGTGAGTTGGAGCAGAGCTTGGCTTGCAATGACAACCACGCCAATGA
CCTCAAGGTACGTGGACTCTTTTTTCTCTCTCCGGGACGGAGCTTGCGCC
AGACCAGTTGTTGACACCATCTCGTGCAGAACCTACAACGAATCATTCAA
CTACCTAGCGTTCCTGCAGAGAACAAGTTGCGCTTGGTTGCTCTGTACGC
CATCCGCTACGAGAAGCAACCGAACAATGCACTCCCGATCCTGCTCGATC
TCCTCGTCACCGCCGGCAACGTCCCATCATACAAGGTCAACATTATCCCT
AAACTCCTCGCCTACCACCACTCCTTACAAGCCCCGCCGGTCGCAGGCGG
CTTTTCTGACCTCTTCGAATCCACATCCCTCTTCTCCGGTGCCCGAGACC
GGTTCAAGGGTCTGAAAGGCGTCGAAAACGTCTACACCCAGCACTCGCCT
CGCCTGGAAGCCACTCTCCAAAATCTGATTAAAGGACGCCTGAAGGAGCT
GCAATACCCGTTTCTCGAAGGCGGGGGCCATACACGAGACAAGCCCCAAG
ATATCATCATTTTCATGGTGGGCGGGGCGACGTATGAGGAAGCGAAAATG
GTCGCCCAAGTCAATGCCAGCTCACCTGGAGTAAGAGTCGTCTTAGGAGG
CACCTCCATTCACAATAGCACAAGCTTCCTTGAGGAAGTCGATGATGCCG
TGAGCGGCTGGCCTGAGCCCGCCCCCTCGTCCGCCGCTGGTCGGCTTCAG
AGGGCAGTCGGACATTAACCTCTGCTTTGCTTCTTTGCCTCTGTGTATCT
GTAGCTTCTTATTATAATATATCCTGAAATCTTAGCTGTTAGTCACTTTC
ATGTCTGTCTCATGAGTTTGTTCCGCAGATTGTTATCATTAATCTGCAAA
CACAGGAAATGAGGCCACCTCTGCCTTGAGGTATTTGAACAGAGTATAGT
TATGCTTCGTGTATGGTATCCCAAGCCAATCCGGCCAAGCTGCGTGCATA
GCTAGTTCATTCTATTAACGTGGCACAATACACAACAGTAACGAC
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Coding sequence (CDS) from alignment at ch3:3129875..3132269+

>KJC3_003817-T2 ID=KJC3_003817-T2|Name=KJC3_003817-T2|organism=Aspergillus niger KJC3|type=CDS|length=3144bp|location=Sequence derived from alignment at ch3:3129875..3132269+ (Aspergillus niger KJC3)
ATGCGACATCTCCGCTGCCTTTGTTTCGTGCGCCCTTCCCCCACCTCCGT
TCAATTCCTGATCGACGAGCTCCGCGAGCCCAAGTACGGAGAATACTACA
TCTACCTCACCAATATTATTCGCAAATCCTCCCTCGAACGTCTCGCCGAA
GCGGATTCCCACGAGGTAGTTCGCGTGGTGCAGGAACACTTTGCCGACTT
CCTTGTGATCAATCCGGATCTCTGTTCCCTGAATTTGGGCTTCCCACAGC
AGCGCTTGTGGAGCCAGTCGCCAGATCTGTGGAATGCGGATGCCTTACAA
AGAGCAACGGAGGGGGTCATTGCCATGTTGTTGGCGCTGAAGAAGAATCC
GCTGATCCGTTACGAAAAGAACAGTCTGCTAGCGAAGAAGTTGGCCACAG
AGGTCCGCTATCAAGTGACGCAGGAAGAGCAGCTCTTCAATTTCCGCAAG
ACCGATACACCCCCGATCCTGTTGATTTTGGACCGTAGAGACGACCCCAT
CACTCCGCTACTGACCCAGTGGACCTACCAAGCGATGGTGCATGAGTTGA
TGGGCATTCACAATGGGCGCGTGGACCTCCGGGACGTACCGGAGATTCGA
CCGGAATTGCGTGAAATCGTCCTTTCCCAGGATCAAGATCCGTTCTTCAA
GAAGAATATGTACCAGAACTTTGGTGATCTAGGCCAGAACATCAAGGAGT
ATGTTGAGCAGTACCAGGTCAAAACGCAAAACACGATGAACATCGAGTCG
ATTGCGGACATGAAGCGCTTCGTGGAGGACTATCCCGAGTTTCGTAAACT
ATCGGGCAATGTGAGTAAACATGTCACACTAGTGGGGGAGCTGAGTCGGC
GCGTGGGTGAGGATGACCTGCTCGACGTCAGTGAGTTGGAGCAGAGCTTG
GCTTGCAATGACAACCACGCCAATGACCTCAAGAACCTACAACGAATCAT
TCAACTACCTAGCGTTCCTGCAGAGAACAAGTTGCGCTTGGTTGCTCTGT
ACGCCATCCGCTACGAGAAGCAACCGAACAATGCACTCCCGATCCTGCTC
GATCTCCTCGTCACCGCCGGCAACGTCCCATCATACAAGGTCAACATTAT
CCCTAAACTCCTCGCCTACCACCACTCCTTACAAGCCCCGCCGGTCGCAG
GCGGCTTTTCTGACCTCTTCGAATCCACATCCCTCTTCTCCGGTGCCCGA
GACCGGTTCAAGGGTCTGAAAGGCGTCGAAAACGTCTACACCCAGCACTC
GCCTCGCCTGGAAGCCACTCTCCAAAATCTGATTAAAGGACGCCTGAAGG
AGCTGCAATACCCGTTTCTCGAAGGCGGGGGCCATACACGAGACAAGCCC
CAAGATATCATCATTTTCATGGTGGGCGGGGCGACGTATGAGGAAGCGAA
AATGGTCGCCCAAGTCAATGCCAGCTCACCTGGAGTAAGAGTCGTCTTAG
GAGGCACCTCCATTCACAATAGCACAAGCTTCCTTGAGGAAGTCGATGAT
GCCGTGAGCGGCTGGCCTGAGCCCGCCCCCTCGTCCGCCGCTGGTCGGCT
TCAGAGGGCAGTCGGACATTAAATGCGACATCTCCGCTGCCTTTGTTTCG
TGCGCCCTTCCCCCACCTCCGTTCAATTCCTGATCGACGAGCTCCGCGAG
CCCAAGTACGGAGAATACTACATCTACCTCACCAATATTATTCGCAAATC
CTCCCTCGAACGTCTCGCCGAAGCGGATTCCCACGAGGTAGTTCGCGTGG
TGCAGGAACACTTTGCCGACTTCCTTGTGATCAATCCGGATCTCTGTTCC
CTGAATTTGGGCTTCCCACAGCAGCGCTTGTGGAGCCAGTCGCCAGATCT
GTGGAATGCGGATGCCTTACAAAGAGCAACGGAGGGGGTCATTGCCATGT
TGTTGGCGCTGAAGAAGAATCCGCTGATCCGTTACGAAAAGAACAGTCTG
CTAGCGAAGAAGTTGGCCACAGAGGTCCGCTATCAAGTGACGCAGGAAGA
GCAGCTCTTCAATTTCCGCAAGACCGATACACCCCCGATCCTGTTGATTT
TGGACCGTAGAGACGACCCCATCACTCCGCTACTGACCCAGTGGACCTAC
CAAGCGATGGTGCATGAGTTGATGGGCATTCACAATGGGCGCGTGGACCT
CCGGGACGTACCGGAGATTCGACCGGAATTGCGTGAAATCGTCCTTTCCC
AGGATCAAGATCCGTTCTTCAAGAAGAATATGTACCAGAACTTTGGTGAT
CTAGGCCAGAACATCAAGGAGTATGTTGAGCAGTACCAGGTCAAAACGCA
AAACACGATGAACATCGAGTCGATTGCGGACATGAAGCGCTTCGTGGAGG
ACTATCCCGAGTTTCGTAAACTATCGGGCAATGTGAGTAAACATGTCACA
CTAGTGGGGGAGCTGAGTCGGCGCGTGGGTGAGGATGACCTGCTCGACGT
CAGTGAGTTGGAGCAGAGCTTGGCTTGCAATGACAACCACGCCAATGACC
TCAAGAACCTACAACGAATCATTCAACTACCTAGCGTTCCTGCAGAGAAC
AAGTTGCGCTTGGTTGCTCTGTACGCCATCCGCTACGAGAAGCAACCGAA
CAATGCACTCCCGATCCTGCTCGATCTCCTCGTCACCGCCGGCAACGTCC
CATCATACAAGGTCAACATTATCCCTAAACTCCTCGCCTACCACCACTCC
TTACAAGCCCCGCCGGTCGCAGGCGGCTTTTCTGACCTCTTCGAATCCAC
ATCCCTCTTCTCCGGTGCCCGAGACCGGTTCAAGGGTCTGAAAGGCGTCG
AAAACGTCTACACCCAGCACTCGCCTCGCCTGGAAGCCACTCTCCAAAAT
CTGATTAAAGGACGCCTGAAGGAGCTGCAATACCCGTTTCTCGAAGGCGG
GGGCCATACACGAGACAAGCCCCAAGATATCATCATTTTCATGGTGGGCG
GGGCGACGTATGAGGAAGCGAAAATGGTCGCCCAAGTCAATGCCAGCTCA
CCTGGAGTAAGAGTCGTCTTAGGAGGCACCTCCATTCACAATAGCACAAG
CTTCCTTGAGGAAGTCGATGATGCCGTGAGCGGCTGGCCTGAGCCCGCCC
CCTCGTCCGCCGCTGGTCGGCTTCAGAGGGCAGTCGGACATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006904vesicle docking involved in exocytosis
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003817KJC3_003817Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003817-T2KJC3_003817-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003817-T2.utr5p1KJC3_003817-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003817-T2.utr5p2KJC3_003817-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003817-T2.exon1KJC3_003817-T2.exon1Aspergillus niger KJC3exon
KJC3_003817-T2.exon2KJC3_003817-T2.exon2Aspergillus niger KJC3exon
KJC3_003817-T2.exon3KJC3_003817-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003817-T2.cdsKJC3_003817-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003817-T2.utr3p1KJC3_003817-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036045
DBxrefInterPro:IPR043154
DBxrefInterPro:IPR027482
DBxrefInterPro:IPR043127
DBxrefInterPro:IPR001619
DBxrefPFAM:PF00995
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3129875..3132269 +
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