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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3148970..3150617+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003824-T1 ID=KJC3_003824-T1|Name=KJC3_003824-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1648bp|location=Sequence derived from alignment at ch3:3148970..3150617+ (Aspergillus niger KJC3)
AGTGAGCGTGCAACAATGATCCAATATCGTCAGTTATAACACGAGTAATA
TGTGAACGAGTTATTCCTTGTCCTTCTAACATGAATGTATGGTCTGGCAC
AATATCGCTGGATGGAGGCACACAACTCCAAGGTGAGCCTCGCCATCCAC
CCGGCTACATTCGCCCTACTCATCACCAAAGCTAGGCCTGCAATTGATTG
ACCGGTCGTCGAACTGGCAACCAGACATTGGCAAAGACTCCGCGCTCAGC
CTTCGCTGTTTCGTTAACCCGTCCCTCATACCACTCTATGCACGATGTGG
TCCCAATCTCGAAGTTCACACAAATAGGCCGCAGACCTCGCAATGGCTGA
CGGACAAGCTGACGGGCACTATCTGGTTGGAAGATGATGACTTGGATCGG
TTGCAGACGCTACAATGCCCAATTGGGCTGCTCGTGGGGATTGACAATGA
TGCACGGACAAAGACTTCTGAAGCCAACACGACCGATCTCTTGATACACG
GAATGCTGTCAACCACGACATCCTACGAACGACCGCCCACCCCGCCTGTC
TCTTCACCGGAGCTAGACCACCAGCCGTCTCAAGTTATAAGACAGGAACT
GAGAATATATGCCACTCCAATCTCTGCACATCTCATTGCCAAAACCCAAT
CTCTCCCATCTCCACAAGATACCGATGGCCACGGTCGATCCCCTCAGTTC
CTTCCGGACATTCGCTCGCCAAGTCCCAAGCGCAGACGTGTAGCAACGCT
CTTCGAATCAGTGGCGCAGCATCATAAGAGAGTACGGCAGAAGGGAGGCG
AGGCTGTATCGCAGTTAATGGCGCGATCACTCTCCCAGTCGTCCCAGCAA
CTGCAAGGCCTTCGGGTCAAGCGAGAGTCAGAGGAGCCTTCCCTTCCCCA
ATTGGACCGGATCGCCTCACAGCGGTCCCGCTCTGTATCTATTGGAGCAA
ATCTCAACACCAAACTTCTGGAAGCTCGATCAGAGCAGTCGAGGCCAAGC
AGCAGACGGGGCTACGTGCGCGAACTGAACTCTCGGAGAGGCACGCCAAA
CCCATTCGTGGAGTCATCATTACGAAGAGAAAAAGAATTGTCACCGGAAT
TGCCGTCTGAAGGGAAGATTGAGTCTCTAACTGCGCCCAAGGATGCCGAT
ACCATTATTGCGGAGAACAAAAACACGATAACGCGGACAATCTTGACCTG
CATGCGGCTTTACGGCTTCAACCGTGCTACAGCACGCTCCGCGAGCTCGA
GCAGGCCGCAAACCGGGACCGGCAGCCATGATATGGTCACTGCGAATGAT
GAGGGTTTTTCCAACACCGATGAAGATGAATTCAAGGCAATGTACCATGC
GACCTATCGCGCATCAACCTTTGCACTGCGGAAGTATCTGAAAGAGCCGT
CTTCAGGCGAAAACGACTCGCCGAATAAGCCACCACTATTGGAGAAGGGG
AAAGCAATGACGTACATTGATGAGTTCTTGAAATTGTTTTGCGAGGAGAA
TTAAGTCTGTCTGGTACAGATAACGAGTGATGAGTTACGAAGTATATAGC
ACAGCGATATTGTTTGAAGCCAGGAAGCTATCAATGTTTATCCAAGGTGT
ATACCATCACGTCACAGCACAAACATACGTGCCATATTTGCAAAAAGG back to topCoding sequence (CDS) from alignment at ch3:3148970..3150617+ >KJC3_003824-T1 ID=KJC3_003824-T1|Name=KJC3_003824-T1|organism=Aspergillus niger KJC3|type=CDS|length=1002bp|location=Sequence derived from alignment at ch3:3148970..3150617+ (Aspergillus niger KJC3)
ATGCTGTCAACCACGACATCCTACGAACGACCGCCCACCCCGCCTGTCTC
TTCACCGGAGCTAGACCACCAGCCGTCTCAAGTTATAAGACAGGAACTGA
GAATATATGCCACTCCAATCTCTGCACATCTCATTGCCAAAACCCAATCT
CTCCCATCTCCACAAGATACCGATGGCCACGGTCGATCCCCTCAGTTCCT
TCCGGACATTCGCTCGCCAAGTCCCAAGCGCAGACGTGTAGCAACGCTCT
TCGAATCAGTGGCGCAGCATCATAAGAGAGTACGGCAGAAGGGAGGCGAG
GCTGTATCGCAGTTAATGGCGCGATCACTCTCCCAGTCGTCCCAGCAACT
GCAAGGCCTTCGGGTCAAGCGAGAGTCAGAGGAGCCTTCCCTTCCCCAAT
TGGACCGGATCGCCTCACAGCGGTCCCGCTCTGTATCTATTGGAGCAAAT
CTCAACACCAAACTTCTGGAAGCTCGATCAGAGCAGTCGAGGCCAAGCAG
CAGACGGGGCTACGTGCGCGAACTGAACTCTCGGAGAGGCACGCCAAACC
CATTCGTGGAGTCATCATTACGAAGAGAAAAAGAATTGTCACCGGAATTG
CCGTCTGAAGGGAAGATTGAGTCTCTAACTGCGCCCAAGGATGCCGATAC
CATTATTGCGGAGAACAAAAACACGATAACGCGGACAATCTTGACCTGCA
TGCGGCTTTACGGCTTCAACCGTGCTACAGCACGCTCCGCGAGCTCGAGC
AGGCCGCAAACCGGGACCGGCAGCCATGATATGGTCACTGCGAATGATGA
GGGTTTTTCCAACACCGATGAAGATGAATTCAAGGCAATGTACCATGCGA
CCTATCGCGCATCAACCTTTGCACTGCGGAAGTATCTGAAAGAGCCGTCT
TCAGGCGAAAACGACTCGCCGAATAAGCCACCACTATTGGAGAAGGGGAA
AGCAATGACGTACATTGATGAGTTCTTGAAATTGTTTTGCGAGGAGAATT
AA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003824-T1.utr5p1 | KJC3_003824-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003824-T1.utr3p1 | KJC3_003824-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041260 |
| DBxref | PFAM:PF18596 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3148970..3150617 + |
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