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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3174769..3176447+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003832-T1 ID=KJC3_003832-T1|Name=KJC3_003832-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1679bp|location=Sequence derived from alignment at ch3:3174769..3176447+ (Aspergillus niger KJC3)
CGCATGGCAGTTCTGCAAACCAATGACGCACAACCCAACCCAAACCCCGA
CCGACTCGGGTCAACGAAATGCCGAATCATACCTTCTGCCGTACTGTAAA
CCAAATTAGTAAACCAAATACCGACATCTCCGCGGGTCCGAAACCGCAGT
TCGAAAAAAGAATCCTGATCAATCAGCGGGATCGATTACCAACTAACCAC
CAATTAACTATCCACTACTCAATTGCCTCCGAGATTGTCTACTATCCAAC
ATCATCACACTCTCACCAATATACACACACCACACCACACCACCCTCCCT
ACTCTCAGACAAAAAAAAGCACACCCACCAAAATGCCCCTCCCCGCGCGA
ACCGCCTCAATCACGCGCATAACCAACGAGACCAAAATCCAAATCTCCTT
GTCCCTAGACGGCGGCATCCTGCCCCCCTACGAACCATGCGCTCATTTCC
CAGCCCCGACGGACCCCGCTGAAGTCGAGGCCTCCAAGAAGGGCATCATC
CCCAACAAAGCCGCCCCGCACGCCACACAATTCACCCCGACGCAGCAAAT
CACCATTAACACTGGGATCGGATTCCTGGATCATATGTTGCATGCGTTGG
CGAAGCATGGAGGGTGGAGTTTGGCTGTGAGGGCTAAGGGAGATCTTTTC
AGTATGACTACCTTTTTCTAGGTTCTATCTTATCTAGGGGTTGTGAAGTG
GAATTGATATGCTAATGATAATGATGGTTATAGTCGACGATCACCACACG
ACAGAAGATACCTTCCTCGCGCTGGGTTCCGCGTTCACTGAAGCACTGGG
TGCACGGCAATCGCTGGCGCGGTTCGGACGGGGCGATGCACCTCTGGACG
AGGCGCTGTCGTGGGCGGTGATTGATCTGTCGAGTCGGCCGTGGGCGGTG
ATCAACATTGGGTTCCGGAGGGAGAAGATCGGGGATTTGAGTACGGAGAT
GATCACGCATGGATTGCAGAGTTTTGCCCAGGCGGCGGGAGTGACGCTGC
ATGTGGGGTGCACCTATGGTGATAATGATCATCATCGGGCGGAGAGTGCG
TTTAAGGCGTTGGCGGTAGCGATTAGGACGGCGTGTACGAGGAGAGTGGA
GGGAGAGGTTGGGGCGGGGGATGTGGTTAGTACGAAGGGGGTTCTCTAAA
TTATTTTATATAGTATCTTGTTGGTGGAGGCGTCTAGATGGTTCGGTATG
TTGAATCAATCACAGTCAATCTTATGCATATAGTATACACTATGTCATGT
TATGTTATAGATGACCAGATGGAGGCTCAGGTAGAAACACCCAAGGCTTG
CGTCGCCCGGGTCCAGTATGCTTTTCTATCATCGTTGGCATTGGTCCCCA
CGCAGTCGGTGATGTATGCCGCCCAGCCTGCTTCGGACCCCGACTGCAAC
TGAGACCGCACACTAGCCGAGCACTGTGTGGTCAGGAACCATGCCCCGGA
GCCGAAGTCGTAGTCTTCGTTGGCGAGCAAGAGGTTCAAAACCCCCGTTG
GGTCTCCGGATACGCTGGAGAGTTGGCCCGCGAGCGCGGGAAGAGATGCC
GCGTATTTGGAGTTGTACGAAGGAGATTGCATGTTTCGTGCTGTATACCA
TCATTAGCATCTATTGCTATCTATGTATGGCAGGATATGAGAGGAGTGAG
ACGTACTGCCCTGTCCCGGAACACCGGGA back to topCoding sequence (CDS) from alignment at ch3:3174769..3176447+ >KJC3_003832-T1 ID=KJC3_003832-T1|Name=KJC3_003832-T1|organism=Aspergillus niger KJC3|type=CDS|length=1998bp|location=Sequence derived from alignment at ch3:3174769..3176447+ (Aspergillus niger KJC3)
ATGCCGAATCATACCTTCTGCCGTACTGTAAACCAAATTAGTAAACCAAA
TACCGACATCTCCGCGGGTCCGAAACCGCAGTTCGAAAAAAGAATCCTGA
TCAATCAGCGGGATCGATTACCAACTAACCACCAATTAACTATCCACTAC
TCAATTGCCTCCGAGATTGTCTACTATCCAACATCATCACACTCTCACCA
ATATACACACACCACACCACACCACCCTCCCTACTCTCAGACAAAAAAAA
GCACACCCACCAAAATGCCCCTCCCCGCGCGAACCGCCTCAATCACGCGC
ATAACCAACGAGACCAAAATCCAAATCTCCTTGTCCCTAGACGGCGGCAT
CCTGCCCCCCTACGAACCATGCGCTCATTTCCCAGCCCCGACGGACCCCG
CTGAAGTCGAGGCCTCCAAGAAGGGCATCATCCCCAACAAAGCCGCCCCG
CACGCCACACAATTCACCCCGACGCAGCAAATCACCATTAACACTGGGAT
CGGATTCCTGGATCATATGTTGCATGCGTTGGCGAAGCATGGAGGGTGGA
GTTTGGCTGTGAGGGCTAAGGGAGATCTTTTCATCGACGATCACCACACG
ACAGAAGATACCTTCCTCGCGCTGGGTTCCGCGTTCACTGAAGCACTGGG
TGCACGGCAATCGCTGGCGCGGTTCGGACGGGGCGATGCACCTCTGGACG
AGGCGCTGTCGTGGGCGGTGATTGATCTGTCGAGTCGGCCGTGGGCGGTG
ATCAACATTGGGTTCCGGAGGGAGAAGATCGGGGATTTGAGTACGGAGAT
GATCACGCATGGATTGCAGAGTTTTGCCCAGGCGGCGGGAGTGACGCTGC
ATGTGGGGTGCACCTATGGTGATAATGATCATCATCGGGCGGAGAGTGCG
TTTAAGGCGTTGGCGGTAGCGATTAGGACGGCGTGTACGAGGAGAGTGGA
GGGAGAGGTTGGGGCGGGGGATGTGGTTAGTACGAAGGGGGTTCTCTAAA
TGCCGAATCATACCTTCTGCCGTACTGTAAACCAAATTAGTAAACCAAAT
ACCGACATCTCCGCGGGTCCGAAACCGCAGTTCGAAAAAAGAATCCTGAT
CAATCAGCGGGATCGATTACCAACTAACCACCAATTAACTATCCACTACT
CAATTGCCTCCGAGATTGTCTACTATCCAACATCATCACACTCTCACCAA
TATACACACACCACACCACACCACCCTCCCTACTCTCAGACAAAAAAAAG
CACACCCACCAAAATGCCCCTCCCCGCGCGAACCGCCTCAATCACGCGCA
TAACCAACGAGACCAAAATCCAAATCTCCTTGTCCCTAGACGGCGGCATC
CTGCCCCCCTACGAACCATGCGCTCATTTCCCAGCCCCGACGGACCCCGC
TGAAGTCGAGGCCTCCAAGAAGGGCATCATCCCCAACAAAGCCGCCCCGC
ACGCCACACAATTCACCCCGACGCAGCAAATCACCATTAACACTGGGATC
GGATTCCTGGATCATATGTTGCATGCGTTGGCGAAGCATGGAGGGTGGAG
TTTGGCTGTGAGGGCTAAGGGAGATCTTTTCATCGACGATCACCACACGA
CAGAAGATACCTTCCTCGCGCTGGGTTCCGCGTTCACTGAAGCACTGGGT
GCACGGCAATCGCTGGCGCGGTTCGGACGGGGCGATGCACCTCTGGACGA
GGCGCTGTCGTGGGCGGTGATTGATCTGTCGAGTCGGCCGTGGGCGGTGA
TCAACATTGGGTTCCGGAGGGAGAAGATCGGGGATTTGAGTACGGAGATG
ATCACGCATGGATTGCAGAGTTTTGCCCAGGCGGCGGGAGTGACGCTGCA
TGTGGGGTGCACCTATGGTGATAATGATCATCATCGGGCGGAGAGTGCGT
TTAAGGCGTTGGCGGTAGCGATTAGGACGGCGTGTACGAGGAGAGTGGAG
GGAGAGGTTGGGGCGGGGGATGTGGTTAGTACGAAGGGGGTTCTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004424 | imidazoleglycerol-phosphate dehydratase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000105 | histidine biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003832-T1.utr5p1 | KJC3_003832-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003832-T1.utr3p1 | KJC3_003832-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020568 |
| DBxref | InterPro:IPR020565 |
| DBxref | InterPro:IPR000807 |
| DBxref | InterPro:IPR038494 |
| DBxref | PFAM:PF00475 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3174769..3176447 + |
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