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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3177875..3179075- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003834-T1 ID=KJC3_003834-T1|Name=KJC3_003834-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1201bp|location=Sequence derived from alignment at ch3:3177875..3179075- (Aspergillus niger KJC3)
ATGCGACGTGGACTTCTCATTTTCCTCATCGCAAATCTCATTGTCGTCAC
ATTCCTCGTGCGAAGCGTCTTTACACTTCTTTCCCTACTGGTGGAAGATG
CTTCCGCCGACGCTATCCACCGCGCCGAGCTCCCCTCGCCAAACTCCAGT
TTGATTGAACAACGCCCTCAGATCATTCCCAAGATCATCCACCAGACATA
CAAGAACGAAACGATCCCGGAAGTATGGAGGGAAGCCCAACAGAGCTGCA
TTGATCTGCACCCAGACTACGAATACATTGTATGTTCAGCCTTGTCGATG
TACATTTCGTTCACATGAACTTTTTTTGCTAACACGCATCTCAATCAGCT
CTGGACCAACGAAAAGTCGCGCGAATTCATCGCCAACGAGTACCCCTGGT
TCCTCGAGACGTTCGATGGCTACAAGTATCCCATTCAGCGTGCTGATTCG
ATCCGCTACTTTGTCCTGGCACACTACGGTGGCACCTACATTGATCTGGA
TGATGTGTGTATAGCCTTTATTTCATTGATTGAGACTATGTCTGACTGGA
TCTTAGGGATGCAATCGCCGGTTAGATCCTCTTCTTGCCTACCCTGCCTG
GGTCCGTCGCACTGTTCCCACCGGTATCTCCAATGATGCCATGGGATCTG
TTCCCCAGCACCCCTTCTTCCTGCGTACGATCGAGCTGCTGCAGTCGTAT
GACCGCCATTGGCTCCTCCCGTACATCACGGTCATGTACTCGACTGGTCC
CCTGTTTTTGTCGGTGATCTGGAAGGAGTACATGCAGACCAATCCCAGCG
AGTCAGGCCGTGTCCGCATCTTGATGCGCGATGAGTACAACAGGTACTCG
TGGAGCTTTTTCACGCACCACGTGGGCAACAGCTGGCACGGAAAAGACGC
CCGCTTGATCTTCTGGATGGGCCAGCACTGGGTGTTCCTCACCGTCTGCG
GTTTCTTCCTGGCTGCCGTCGTTGGCTTCGCGCTCTGGTGGCTGTACGCG
CGCATCATGCTGTTGGGATCCAAGTACCGTTACCGCTACTCGAAGATCCC
TTCCTTTATTTCGGCTTCCCGCCTGTCTTCGCCGACAAGGATGGGGCGGC
GCATGATGCCTACCCTCCTTCGTCGCGTCAGCTTCAAAGAAGACGAGGAG
GCCGCCGGCGTTACCGAAACGTCGTACGAACTCTATAGCCGACGCGATTA
A back to topCoding sequence (CDS) from alignment at ch3:3177875..3179075- >KJC3_003834-T1 ID=KJC3_003834-T1|Name=KJC3_003834-T1|organism=Aspergillus niger KJC3|type=CDS|length=3240bp|location=Sequence derived from alignment at ch3:3177875..3179075- (Aspergillus niger KJC3)
GGATGCAATCGCCGGTTAGATCCTCTTCTTGCCTACCCTGCCTGGGTCCG
TCGCACTGTTCCCACCGGTATCTCCAATGATGCCATGGGATCTGTTCCCC
AGCACCCCTTCTTCCTGCGTACGATCGAGCTGCTGCAGTCGTATGACCGC
CATTGGCTCCTCCCGTACATCACGGTCATGTACTCGACTGGTCCCCTGTT
TTTGTCGGTGATCTGGAAGGAGTACATGCAGACCAATCCCAGCGAGTCAG
GCCGTGTCCGCATCTTGATGCGCGATGAGTACAACAGGTACTCGTGGAGC
TTTTTCACGCACCACGTGGGCAACAGCTGGCACGGAAAAGACGCCCGCTT
GATCTTCTGGATGGGCCAGCACTGGGTGTTCCTCACCGTCTGCGGTTTCT
TCCTGGCTGCCGTCGTTGGCTTCGCGCTCTGGTGGCTGTACGCGCGCATC
ATGCTGTTGGGATCCAAGTACCGTTACCGCTACTCGAAGATCCCTTCCTT
TATTTCGGCTTCCCGCCTGTCTTCGCCGACAAGGATGGGGCGGCGCATGA
TGCCTACCCTCCTTCGTCGCGTCAGCTTCAAAGAAGACGAGGAGGCCGCC
GGCGTTACCGAAACGTCGTACGAACTCTATAGCCGACGCGATTAACTCTG
GACCAACGAAAAGTCGCGCGAATTCATCGCCAACGAGTACCCCTGGTTCC
TCGAGACGTTCGATGGCTACAAGTATCCCATTCAGCGTGCTGATTCGATC
CGCTACTTTGTCCTGGCACACTACGGTGGCACCTACATTGATCTGGATGA
TATGCGACGTGGACTTCTCATTTTCCTCATCGCAAATCTCATTGTCGTCA
CATTCCTCGTGCGAAGCGTCTTTACACTTCTTTCCCTACTGGTGGAAGAT
GCTTCCGCCGACGCTATCCACCGCGCCGAGCTCCCCTCGCCAAACTCCAG
TTTGATTGAACAACGCCCTCAGATCATTCCCAAGATCATCCACCAGACAT
ACAAGAACGAAACGATCCCGGAAGTATGGAGGGAAGCCCAACAGAGCTGC
ATTGATCTGCACCCAGACTACGAATACATTGGATGCAATCGCCGGTTAGA
TCCTCTTCTTGCCTACCCTGCCTGGGTCCGTCGCACTGTTCCCACCGGTA
TCTCCAATGATGCCATGGGATCTGTTCCCCAGCACCCCTTCTTCCTGCGT
ACGATCGAGCTGCTGCAGTCGTATGACCGCCATTGGCTCCTCCCGTACAT
CACGGTCATGTACTCGACTGGTCCCCTGTTTTTGTCGGTGATCTGGAAGG
AGTACATGCAGACCAATCCCAGCGAGTCAGGCCGTGTCCGCATCTTGATG
CGCGATGAGTACAACAGGTACTCGTGGAGCTTTTTCACGCACCACGTGGG
CAACAGCTGGCACGGAAAAGACGCCCGCTTGATCTTCTGGATGGGCCAGC
ACTGGGTGTTCCTCACCGTCTGCGGTTTCTTCCTGGCTGCCGTCGTTGGC
TTCGCGCTCTGGTGGCTGTACGCGCGCATCATGCTGTTGGGATCCAAGTA
CCGTTACCGCTACTCGAAGATCCCTTCCTTTATTTCGGCTTCCCGCCTGT
CTTCGCCGACAAGGATGGGGCGGCGCATGATGCCTACCCTCCTTCGTCGC
GTCAGCTTCAAAGAAGACGAGGAGGCCGCCGGCGTTACCGAAACGTCGTA
CGAACTCTATAGCCGACGCGATTAACTCTGGACCAACGAAAAGTCGCGCG
AATTCATCGCCAACGAGTACCCCTGGTTCCTCGAGACGTTCGATGGCTAC
AAGTATCCCATTCAGCGTGCTGATTCGATCCGCTACTTTGTCCTGGCACA
CTACGGTGGCACCTACATTGATCTGGATGATATGCGACGTGGACTTCTCA
TTTTCCTCATCGCAAATCTCATTGTCGTCACATTCCTCGTGCGAAGCGTC
TTTACACTTCTTTCCCTACTGGTGGAAGATGCTTCCGCCGACGCTATCCA
CCGCGCCGAGCTCCCCTCGCCAAACTCCAGTTTGATTGAACAACGCCCTC
AGATCATTCCCAAGATCATCCACCAGACATACAAGAACGAAACGATCCCG
GAAGTATGGAGGGAAGCCCAACAGAGCTGCATTGATCTGCACCCAGACTA
CGAATACATTGGATGCAATCGCCGGTTAGATCCTCTTCTTGCCTACCCTG
CCTGGGTCCGTCGCACTGTTCCCACCGGTATCTCCAATGATGCCATGGGA
TCTGTTCCCCAGCACCCCTTCTTCCTGCGTACGATCGAGCTGCTGCAGTC
GTATGACCGCCATTGGCTCCTCCCGTACATCACGGTCATGTACTCGACTG
GTCCCCTGTTTTTGTCGGTGATCTGGAAGGAGTACATGCAGACCAATCCC
AGCGAGTCAGGCCGTGTCCGCATCTTGATGCGCGATGAGTACAACAGGTA
CTCGTGGAGCTTTTTCACGCACCACGTGGGCAACAGCTGGCACGGAAAAG
ACGCCCGCTTGATCTTCTGGATGGGCCAGCACTGGGTGTTCCTCACCGTC
TGCGGTTTCTTCCTGGCTGCCGTCGTTGGCTTCGCGCTCTGGTGGCTGTA
CGCGCGCATCATGCTGTTGGGATCCAAGTACCGTTACCGCTACTCGAAGA
TCCCTTCCTTTATTTCGGCTTCCCGCCTGTCTTCGCCGACAAGGATGGGG
CGGCGCATGATGCCTACCCTCCTTCGTCGCGTCAGCTTCAAAGAAGACGA
GGAGGCCGCCGGCGTTACCGAAACGTCGTACGAACTCTATAGCCGACGCG
ATTAACTCTGGACCAACGAAAAGTCGCGCGAATTCATCGCCAACGAGTAC
CCCTGGTTCCTCGAGACGTTCGATGGCTACAAGTATCCCATTCAGCGTGC
TGATTCGATCCGCTACTTTGTCCTGGCACACTACGGTGGCACCTACATTG
ATCTGGATGATATGCGACGTGGACTTCTCATTTTCCTCATCGCAAATCTC
ATTGTCGTCACATTCCTCGTGCGAAGCGTCTTTACACTTCTTTCCCTACT
GGTGGAAGATGCTTCCGCCGACGCTATCCACCGCGCCGAGCTCCCCTCGC
CAAACTCCAGTTTGATTGAACAACGCCCTCAGATCATTCCCAAGATCATC
CACCAGACATACAAGAACGAAACGATCCCGGAAGTATGGAGGGAAGCCCA
ACAGAGCTGCATTGATCTGCACCCAGACTACGAATACATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT32 |
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR007577 |
| DBxref | PFAM:PF04488 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3177875..3179075 - |
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