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KJC3_003840-T1, KJC3_003840-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003840-T1
Unique NameKJC3_003840-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3196416..3197270-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003840-T1 ID=KJC3_003840-T1|Name=KJC3_003840-T1|organism=Aspergillus niger KJC3|type=mRNA|length=855bp|location=Sequence derived from alignment at ch3:3196416..3197270- (Aspergillus niger KJC3)
TGCTATTCGGGCGACTGTACTTTTGTGGCTGGTTTCTCCGCTCCCCCACC
ATCGCAGGCGACAATCCAGATTTTCGTCTCCCTCTTTCGATACCTTCCAT
ATCGTCAATCCCGACACGCAGAGCTAAACCGAAGCAATGGCGCCGACTAA
GGGCTCCGGCAGTGGCAAGGCCTCGAACAAGGGCGACGCAAAGAAGAGCA
AGCCTCTCTCGTCCGCATCGAAAGTGAACAAGAAAACCGCCAAGCGCCCG
CCGCCCAAGGAAGTCAAGTCGAAGGCGCGCACAGAGTCTAGCCTGCTGAA
GAAGACGAAGAAGAGAGAATATACGGAGGAGGAGCTGGGACTGCCCAAGC
TGAATGCGATCACCCCCGTCGGTGTGGTAAAGCCCAAGGGCAAGAAGAAG
GGCAAGACTTTCGTTGACGATGCGGTACGTGTTCCATCTACTTTTTAGGC
CGTTCTATGAATGTCGCATTGGCTAACGATGTTACAATAGGAGGGAATGA
TGACTATCCTCGCTATGGTAAATGCGGAGAAGGAAGGACAGATCGAATCC
AAGATGATGAAGGCTCGCCAGTTGGAGGAGATCCGTGAGGCTAAGAGAAA
GGAGGCAGAGGCTAGACAGGCGCAGAAGAAGTCTAAGCTGGTGCGTATAT
ATGCTCATTATTTCCTATTTGTCCCGTTGAAGGACTATATTTTGAGGGTT
GCTAACTGGTTTGGCCCGAACAGGAGGATGCAAAGCAGTCCATCCGCCAA
AAACGCAAGCACAAGGGAGGCTCCAGCGAAACAAAGGCTGAGGCGCCAAC
CAAGGAGTCATCTTCGAAGTCAAAAGGAAAGAAGAAGAGCGTTGCATTTG
CTTGA
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Coding sequence (CDS) from alignment at ch3:3196416..3197270-

>KJC3_003840-T1 ID=KJC3_003840-T1|Name=KJC3_003840-T1|organism=Aspergillus niger KJC3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch3:3196416..3197270- (Aspergillus niger KJC3)
GAGGATGCAAAGCAGTCCATCCGCCAAAAACGCAAGCACAAGGGAGGCTC
CAGCGAAACAAAGGCTGAGGCGCCAACCAAGGAGTCATCTTCGAAGTCAA
AAGGAAAGAAGAAGAGCGTTGCATTTGCTTGAGAGGGAATGATGACTATC
CTCGCTATGGTAAATGCGGAGAAGGAAGGACAGATCGAATCCAAGATGAT
GAAGGCTCGCCAGTTGGAGGAGATCCGTGAGGCTAAGAGAAAGGAGGCAG
AGGCTAGACAGGCGCAGAAGAAGTCTAAGCTGATGGCGCCGACTAAGGGC
TCCGGCAGTGGCAAGGCCTCGAACAAGGGCGACGCAAAGAAGAGCAAGCC
TCTCTCGTCCGCATCGAAAGTGAACAAGAAAACCGCCAAGCGCCCGCCGC
CCAAGGAAGTCAAGTCGAAGGCGCGCACAGAGTCTAGCCTGCTGAAGAAG
ACGAAGAAGAGAGAATATACGGAGGAGGAGCTGGGACTGCCCAAGCTGAA
TGCGATCACCCCCGTCGGTGTGGTAAAGCCCAAGGGCAAGAAGAAGGGCA
AGACTTTCGTTGACGATGCGGAGGATGCAAAGCAGTCCATCCGCCAAAAA
CGCAAGCACAAGGGAGGCTCCAGCGAAACAAAGGCTGAGGCGCCAACCAA
GGAGTCATCTTCGAAGTCAAAAGGAAAGAAGAAGAGCGTTGCATTTGCTT
GAGAGGGAATGATGACTATCCTCGCTATGGTAAATGCGGAGAAGGAAGGA
CAGATCGAATCCAAGATGATGAAGGCTCGCCAGTTGGAGGAGATCCGTGA
GGCTAAGAGAAAGGAGGCAGAGGCTAGACAGGCGCAGAAGAAGTCTAAGC
TGATGGCGCCGACTAAGGGCTCCGGCAGTGGCAAGGCCTCGAACAAGGGC
GACGCAAAGAAGAGCAAGCCTCTCTCGTCCGCATCGAAAGTGAACAAGAA
AACCGCCAAGCGCCCGCCGCCCAAGGAAGTCAAGTCGAAGGCGCGCACAG
AGTCTAGCCTGCTGAAGAAGACGAAGAAGAGAGAATATACGGAGGAGGAG
CTGGGACTGCCCAAGCTGAATGCGATCACCCCCGTCGGTGTGGTAAAGCC
CAAGGGCAAGAAGAAGGGCAAGACTTTCGTTGACGATGCGGAGGATGCAA
AGCAGTCCATCCGCCAAAAACGCAAGCACAAGGGAGGCTCCAGCGAAACA
AAGGCTGAGGCGCCAACCAAGGAGTCATCTTCGAAGTCAAAAGGAAAGAA
GAAGAGCGTTGCATTTGCTTGAGAGGGAATGATGACTATCCTCGCTATGG
TAAATGCGGAGAAGGAAGGACAGATCGAATCCAAGATGATGAAGGCTCGC
CAGTTGGAGGAGATCCGTGAGGCTAAGAGAAAGGAGGCAGAGGCTAGACA
GGCGCAGAAGAAGTCTAAGCTGATGGCGCCGACTAAGGGCTCCGGCAGTG
GCAAGGCCTCGAACAAGGGCGACGCAAAGAAGAGCAAGCCTCTCTCGTCC
GCATCGAAAGTGAACAAGAAAACCGCCAAGCGCCCGCCGCCCAAGGAAGT
CAAGTCGAAGGCGCGCACAGAGTCTAGCCTGCTGAAGAAGACGAAGAAGA
GAGAATATACGGAGGAGGAGCTGGGACTGCCCAAGCTGAATGCGATCACC
CCCGTCGGTGTGGTAAAGCCCAAGGGCAAGAAGAAGGGCAAGACTTTCGT
TGACGATGCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LOC1KJC3_003840Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003840-T1KJC3_003840-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003840-T1.cdsKJC3_003840-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003840-T1.exon3KJC3_003840-T1.exon3Aspergillus niger KJC3exon
KJC3_003840-T1.exon2KJC3_003840-T1.exon2Aspergillus niger KJC3exon
KJC3_003840-T1.exon1KJC3_003840-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003840-T1.utr5p1KJC3_003840-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Product60S ribosomal subunit assembly/export protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3196416..3197270 -
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