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KJC3_003847-T1, KJC3_003847-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003847-T1
Unique NameKJC3_003847-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3214492..3216072-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003847-T1 ID=KJC3_003847-T1|Name=KJC3_003847-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1581bp|location=Sequence derived from alignment at ch3:3214492..3216072- (Aspergillus niger KJC3)
ATGGCCTTCGGAAAGCTCTACGGTCTCCCTGTATGTGTTTCTGCATGTGT
TCAGGAAGCTGTTCTTCCCCTTCACAGGGTTTAGATTAGCTTCCTATTGC
TGTCGCTGAGAACACCTGGCTAATAGACTCCATAGGAGAACGGTCGCACC
ATTGCCTGCCTCGTCGCGGCTAAGGCCAACGACGTTGAGCTTGAGCTGGT
CAAGACTGAGCCCAACTCTGGTGCCTCTTTCAACCAGTCTGCTGAGTACA
CCAAGATCAGCCCCCTCGGCAAGATCCCCGCCTTCGAGGGTGCCAACGGC
TACACTCTGTCTGAGGTCATTGCCATCGCTGTCTACGGTACGTTCTCCCT
GAATACGCCCTGCGCGTTGCAATCTCGTTTGCTTGTTTTATGATGAGTAT
TTTATTTCAAGTTATCCCTGTCAGAACTGGTAATAATAAAAATAATGTTG
ATAACGTTTGACTCTGAAAAAAACCATCTCTTTACCCCACTTTGGGGGTG
AAGAGATTTCGTTTTGATTATTTGATGATCACGCAATTGTCATTTGGTTG
GACAACTCATGCTGACTCGAATAAAAGTGACCTCCCAGAACGAGAAGACC
ACCCTCTTGGGTAAGACCAAGCAGGACTACGCTTCCATCCTTCGTTGGTT
GTCCTTCGCCAACTCCGAGCTCCTCCCCCGCTTCGGTGCCTGGTTCCGCC
CTCTGTTGGGTCTTGACGGCTACAACAAGAAGAACGTCGAGGATGCTTCC
AAGGCTGCTCTGAAGAACGCTGGCGTTCTCAACACCTACCTCACTGCCAA
CACCTTCCTTGTTGGCGAGCGCATCTCCCTGGCTGATTACTTCACTGCCG
CTCTCCTCACCCGTGCCTTCGCTACCGTCCTGGACAAGAAGTTCCGTGAC
GAGAACGTTGCCATCACCCGCTGGTACAAGACCATCGTCAACCAGCCCGC
CTTCAAGGCTGTCTTCGAGAACCCCGTCTTCGTCGAGGAGTGCATCAAGT
ACACTCCCCCCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCTGCCCCCGCT
GCCGCTGCCCCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAAGCCCAAGCA
CCCCCTTGAGGCTCTTGGCCGCTCCGAGTTCGTCCTTGACGAGTGGAAGC
GCCAGTACTCCAACGAGGACACCCGCCCCGTTGCTCTGCCCTGGTTCTGG
CAGAACTACAAGCCCGAGGAGTACTCCCTCTGGTCCGTTAACTACAAGTA
CAACAACGAGCTGAAGCTTACCTTCATGGCCAACAACCTGATCGGTGGTT
TCCACGCCCGTCTTGAGGCTTCCCGCAAGTACCTCTTCGGTGCCCAGGCC
GTCTACGGTGCCAACTACGACTGTGTCATCCAGGGTGTCTTCCTGGTCCG
CGGCCAGGACTCCCAGCCCGCTTTCGAGGTCGGCCCCGACTGGGAGAGCT
ACGAGTTCCGCAAGCTCGACCACACCAACCCCGAGGACCGCAAGCTCATC
GAGGACCAGTGGGCTTGGGATGTCCCCGTCGTCATTGACGGCAAGGAGTA
CCCCTTCGCTGACGGCCACGTCTTCAAATAA
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Coding sequence (CDS) from alignment at ch3:3214492..3216072-

>KJC3_003847-T1 ID=KJC3_003847-T1|Name=KJC3_003847-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch3:3214492..3216072- (Aspergillus niger KJC3)
TGACCTCCCAGAACGAGAAGACCACCCTCTTGGGTAAGACCAAGCAGGAC
TACGCTTCCATCCTTCGTTGGTTGTCCTTCGCCAACTCCGAGCTCCTCCC
CCGCTTCGGTGCCTGGTTCCGCCCTCTGTTGGGTCTTGACGGCTACAACA
AGAAGAACGTCGAGGATGCTTCCAAGGCTGCTCTGAAGAACGCTGGCGTT
CTCAACACCTACCTCACTGCCAACACCTTCCTTGTTGGCGAGCGCATCTC
CCTGGCTGATTACTTCACTGCCGCTCTCCTCACCCGTGCCTTCGCTACCG
TCCTGGACAAGAAGTTCCGTGACGAGAACGTTGCCATCACCCGCTGGTAC
AAGACCATCGTCAACCAGCCCGCCTTCAAGGCTGTCTTCGAGAACCCCGT
CTTCGTCGAGGAGTGCATCAAGTACACTCCCCCCAAGAAGGAGGAGAAGC
CCAAGAAGGAGGCTGCCCCCGCTGCCGCTGCCCCCGCTGAGCCCAAGCCC
GCTGAGGAGAAGAAGCCCAAGCACCCCCTTGAGGCTCTTGGCCGCTCCGA
GTTCGTCCTTGACGAGTGGAAGCGCCAGTACTCCAACGAGGACACCCGCC
CCGTTGCTCTGCCCTGGTTCTGGCAGAACTACAAGCCCGAGGAGTACTCC
CTCTGGTCCGTTAACTACAAGTACAACAACGAGCTGAAGCTTACCTTCAT
GGCCAACAACCTGATCGGTGGTTTCCACGCCCGTCTTGAGGCTTCCCGCA
AGTACCTCTTCGGTGCCCAGGCCGTCTACGGTGCCAACTACGACTGTGTC
ATCCAGGGTGTCTTCCTGGTCCGCGGCCAGGACTCCCAGCCCGCTTTCGA
GGTCGGCCCCGACTGGGAGAGCTACGAGTTCCGCAAGCTCGACCACACCA
ACCCCGAGGACCGCAAGCTCATCGAGGACCAGTGGGCTTGGGATGTCCCC
GTCGTCATTGACGGCAAGGAGTACCCCTTCGCTGACGGCCACGTCTTCAA
ATAAGAGAACGGTCGCACCATTGCCTGCCTCGTCGCGGCTAAGGCCAACG
ACGTTGAGCTTGAGCTGGTCAAGACTGAGCCCAACTCTGGTGCCTCTTTC
AACCAGTCTGCTGAGTACACCAAGATCAGCCCCCTCGGCAAGATCCCCGC
CTTCGAGGGTGCCAACGGCTACACTCTGTCTGAGGTCATTGCCATCGCTG
TCTACGATGGCCTTCGGAAAGCTCTACGGTCTCCCTTGACCTCCCAGAAC
GAGAAGACCACCCTCTTGGGTAAGACCAAGCAGGACTACGCTTCCATCCT
TCGTTGGTTGTCCTTCGCCAACTCCGAGCTCCTCCCCCGCTTCGGTGCCT
GGTTCCGCCCTCTGTTGGGTCTTGACGGCTACAACAAGAAGAACGTCGAG
GATGCTTCCAAGGCTGCTCTGAAGAACGCTGGCGTTCTCAACACCTACCT
CACTGCCAACACCTTCCTTGTTGGCGAGCGCATCTCCCTGGCTGATTACT
TCACTGCCGCTCTCCTCACCCGTGCCTTCGCTACCGTCCTGGACAAGAAG
TTCCGTGACGAGAACGTTGCCATCACCCGCTGGTACAAGACCATCGTCAA
CCAGCCCGCCTTCAAGGCTGTCTTCGAGAACCCCGTCTTCGTCGAGGAGT
GCATCAAGTACACTCCCCCCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCT
GCCCCCGCTGCCGCTGCCCCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAA
GCCCAAGCACCCCCTTGAGGCTCTTGGCCGCTCCGAGTTCGTCCTTGACG
AGTGGAAGCGCCAGTACTCCAACGAGGACACCCGCCCCGTTGCTCTGCCC
TGGTTCTGGCAGAACTACAAGCCCGAGGAGTACTCCCTCTGGTCCGTTAA
CTACAAGTACAACAACGAGCTGAAGCTTACCTTCATGGCCAACAACCTGA
TCGGTGGTTTCCACGCCCGTCTTGAGGCTTCCCGCAAGTACCTCTTCGGT
GCCCAGGCCGTCTACGGTGCCAACTACGACTGTGTCATCCAGGGTGTCTT
CCTGGTCCGCGGCCAGGACTCCCAGCCCGCTTTCGAGGTCGGCCCCGACT
GGGAGAGCTACGAGTTCCGCAAGCTCGACCACACCAACCCCGAGGACCGC
AAGCTCATCGAGGACCAGTGGGCTTGGGATGTCCCCGTCGTCATTGACGG
CAAGGAGTACCCCTTCGCTGACGGCCACGTCTTCAAATAAGAGAACGGTC
GCACCATTGCCTGCCTCGTCGCGGCTAAGGCCAACGACGTTGAGCTTGAG
CTGGTCAAGACTGAGCCCAACTCTGGTGCCTCTTTCAACCAGTCTGCTGA
GTACACCAAGATCAGCCCCCTCGGCAAGATCCCCGCCTTCGAGGGTGCCA
ACGGCTACACTCTGTCTGAGGTCATTGCCATCGCTGTCTACGATGGCCTT
CGGAAAGCTCTACGGTCTCCCTTGACCTCCCAGAACGAGAAGACCACCCT
CTTGGGTAAGACCAAGCAGGACTACGCTTCCATCCTTCGTTGGTTGTCCT
TCGCCAACTCCGAGCTCCTCCCCCGCTTCGGTGCCTGGTTCCGCCCTCTG
TTGGGTCTTGACGGCTACAACAAGAAGAACGTCGAGGATGCTTCCAAGGC
TGCTCTGAAGAACGCTGGCGTTCTCAACACCTACCTCACTGCCAACACCT
TCCTTGTTGGCGAGCGCATCTCCCTGGCTGATTACTTCACTGCCGCTCTC
CTCACCCGTGCCTTCGCTACCGTCCTGGACAAGAAGTTCCGTGACGAGAA
CGTTGCCATCACCCGCTGGTACAAGACCATCGTCAACCAGCCCGCCTTCA
AGGCTGTCTTCGAGAACCCCGTCTTCGTCGAGGAGTGCATCAAGTACACT
CCCCCCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCTGCCCCCGCTGCCGC
TGCCCCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAAGCCCAAGCACCCCC
TTGAGGCTCTTGGCCGCTCCGAGTTCGTCCTTGACGAGTGGAAGCGCCAG
TACTCCAACGAGGACACCCGCCCCGTTGCTCTGCCCTGGTTCTGGCAGAA
CTACAAGCCCGAGGAGTACTCCCTCTGGTCCGTTAACTACAAGTACAACA
ACGAGCTGAAGCTTACCTTCATGGCCAACAACCTGATCGGTGGTTTCCAC
GCCCGTCTTGAGGCTTCCCGCAAGTACCTCTTCGGTGCCCAGGCCGTCTA
CGGTGCCAACTACGACTGTGTCATCCAGGGTGTCTTCCTGGTCCGCGGCC
AGGACTCCCAGCCCGCTTTCGAGGTCGGCCCCGACTGGGAGAGCTACGAG
TTCCGCAAGCTCGACCACACCAACCCCGAGGACCGCAAGCTCATCGAGGA
CCAGTGGGCTTGGGATGTCCCCGTCGTCATTGACGGCAAGGAGTACCCCT
TCGCTGACGGCCACGTCTTCAAATAAGAGAACGGTCGCACCATTGCCTGC
CTCGTCGCGGCTAAGGCCAACGACGTTGAGCTTGAGCTGGTCAAGACTGA
GCCCAACTCTGGTGCCTCTTTCAACCAGTCTGCTGAGTACACCAAGATCA
GCCCCCTCGGCAAGATCCCCGCCTTCGAGGGTGCCAACGGCTACACTCTG
TCTGAGGTCATTGCCATCGCTGTCTACGATGGCCTTCGGAAAGCTCTACG
GTCTCCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003746translation elongation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003847KJC3_003847Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003847-T1KJC3_003847-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003847-T1.cdsKJC3_003847-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003847-T1.exon3KJC3_003847-T1.exon3Aspergillus niger KJC3exon
KJC3_003847-T1.exon2KJC3_003847-T1.exon2Aspergillus niger KJC3exon
KJC3_003847-T1.exon1KJC3_003847-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR036433
DBxrefInterPro:IPR001662
DBxrefPFAM:PF02798
DBxrefPFAM:PF00043
DBxrefPFAM:PF00647
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3214492..3216072 -
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