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KJC3_003848-T1, KJC3_003848-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003848-T1
Unique NameKJC3_003848-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3216309..3218767+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003848-T1 ID=KJC3_003848-T1|Name=KJC3_003848-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2459bp|location=Sequence derived from alignment at ch3:3216309..3218767+ (Aspergillus niger KJC3)
TGTCGGTTGGGTCCGTTGGTGTTCTTCGTCCTCTTTCTCCCTTCCCCAAT
CGCCCTTTTTCTCACCTCACATCCCTCCCAGGCCCCTCCTTTGCCAGCCG
GTCTGCAGCATCATGGCCTGGCAAAGCCCCAATGGCCTTGTGCACGCCAT
GCACTCCATCCGTCGAACTGCTCAATTGCGGCCTTTTGTCCAGCGCTCCG
TGATCTCCGCATCATCCCCGGTCTCCTCTCCCTCCACGCCGGCTCTCCTC
CAGCAATACAAGAATGCCCGCAGCTATGCGACAGAACTACAACCCGTTGC
TGCTCCCCCCATTGAGTTCTCCAAATTCCAGATCCAGCCTGCCCGCATTA
TCCCCGTGTCGCCGGCCTACTTCTCCGGCAGCCCCAAGTTCTTCGACCAC
ATGCTGAAGCTGGAAGCCCTTCTGGCCAAGTATGCCGCACTACCCACGGT
GTCTCCTAGCGAAGCCCCCAGAATGGCCTGGTTCAAGCTGCTTCAGTTCC
GTGATGCCGTGGGCGAGCCCGTCCCGACCAAGAAGTACAAGGGCCTCATC
AAGCTCCTGCAGCGTCTCAACCGCATCGACCCCAAGGTTGCCCCGGAGGA
GGTTCGTACGGCTCTCAACTTCTTCCTTCGTCCGGGTAATCCGTATGGAA
ACAAGCCCGCCCCCAGGACGGTGGATGAACAGGGCAAGGCCCGTGGTAAG
GGCAAGCGCAAGGCGTCCTCGGCGGTGGTGCAGCTGGTCGAGGGTGAGGG
TGAAGTGTTGGTGAACGGAAAGACGCTGAACGAGGCTTTCCCTCGTCTAC
ATGACCGTGAGAGTGCTGTCTGGCCTCTTCGGTGTACGTCACGGCTCGAC
AAGTATAACGTGTGGGCTACCGTTCGCGGTGGAGGAGTGACCGGTCAGGC
GGAGGCTATTACATTGGCTGTTGCACGGGCTCTGCTGGTTCACGAACCTG
CTCTTAAGCCTATCCTGCGGAAGGGTACGTATCTCCGACTCCCGACGAAT
TGGTTGGTAGTAGTGGAGCGAATTGCTGACCGATTTATTTTCTTACAGCT
GGTGTGGTTACCGTGGATGCCCGTCGTGTGGAGAGAAAGAAGCCCGGTCA
TGTCAAGGCCCGCAAGATGCCCACTTGGGTCAAGCGGTGAAAGCACACCT
GCCTACCTTACGCCCAGCTTCTTCTTTTCTCCCTCTGTCTTTTTACTTAT
CCCTCCCTCTCTGGCTTTTGGAGGGATTGTTTCTCTACCTGTCTTCTGTT
TTCCCCTTTTCCCCTTTAATTTCCTTGGTTGTATTATTCCACTTGGCCTT
GTGATTCTCGACGAAAGTATATCCTGTATTGCAAGCATCTCAACCTGGTG
TCACGAGGATTCGTTTCAGGACACGACACTGCATGTTCTCGGCGACAAGC
ATGTAACTATTGGCGTTGAACAATTGAACCGAAACTATAGTGTAGACCAT
CTGTGCGACGGGGGTGTTGAGCATAATTGGACGAGGTAGAAATGCCCCGT
TGACTAAGAGGATTATCCGAGGGTGACTTGTTTGTCCAACAGTACTTGGG
ATTTGTGGTCAATGAGCATGATCTCTTTCCTCCGACCGTCTTGTCACCCA
CCCCCTTTCCAGACAAAGGGAGGTTTCGGGGGGAGGAAGGGGGGGAAGTT
GTTGGACACTAGGACGGCCAGACTCGTGGTCGATATAGGGGAACTGTAAA
GAAGGGGACATAACGCGACCAAGATGTACATAATCTACTGTCTTAGTAGG
CGCAAACACCGTTAACCTTTAAGAAACGGGCACCGAAGATCATTTTACCA
GAATGAACGTTTCAGGCTAGTCAGTAGTCCCTCCTAGCAACTAGCCAGAC
TCATGATTGCCTAGATAGGTTGCGGGATTGAATCCAGCCTGATAATAGTA
GCGACCAGAATCTCTCGTTACACAGGGAGCCCCAAGCGGTCGGTAGTGTC
GAACGCCAGGACGCGACTATCCATAACGTGGCGCCCCATTGATCGGGGAC
TGAAAAGAAGGAAAGGTGATGAACCGGAAGGTACTCTCGGCCTTCCACTT
CCTTTCCCTTCCTTACCCCCCTATAGAGAAAGAAAAGACGGGCTGGAACC
TGCTGGTGGTAACACAGAGAGCGAAGCGAGGTTCCAGATGAATGAAATGA
GCCTTTTCTTTTGGTCTTTTCTTACTCCCGGGACCCGGACGACGCGATAG
GAAGGTATATACGGCCGGATCTTTCTCATCAAATGGGTGTGGTTGGTTGT
GTCGTCATCCGTTCGATTGGGAATTCCCTCCATCATGATTGGGGCAAGCA
TTCATCTGCCTGCTGCTGTTGTGGTCATGGCCAGCGTCATCTTACACCTT
TGTGTCTCGGGAACTCATGGGATCCTGGAAGTGACGTTATTGGACGATGC
GATCGAGATCTAAAACTAGAGTATTCGTCAGGCTGTGGCGGAGAAGGGGA
GCAGCCCTG
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Coding sequence (CDS) from alignment at ch3:3216309..3218767+

>KJC3_003848-T1 ID=KJC3_003848-T1|Name=KJC3_003848-T1|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch3:3216309..3218767+ (Aspergillus niger KJC3)
ATGGCCTGGCAAAGCCCCAATGGCCTTGTGCACGCCATGCACTCCATCCG
TCGAACTGCTCAATTGCGGCCTTTTGTCCAGCGCTCCGTGATCTCCGCAT
CATCCCCGGTCTCCTCTCCCTCCACGCCGGCTCTCCTCCAGCAATACAAG
AATGCCCGCAGCTATGCGACAGAACTACAACCCGTTGCTGCTCCCCCCAT
TGAGTTCTCCAAATTCCAGATCCAGCCTGCCCGCATTATCCCCGTGTCGC
CGGCCTACTTCTCCGGCAGCCCCAAGTTCTTCGACCACATGCTGAAGCTG
GAAGCCCTTCTGGCCAAGTATGCCGCACTACCCACGGTGTCTCCTAGCGA
AGCCCCCAGAATGGCCTGGTTCAAGCTGCTTCAGTTCCGTGATGCCGTGG
GCGAGCCCGTCCCGACCAAGAAGTACAAGGGCCTCATCAAGCTCCTGCAG
CGTCTCAACCGCATCGACCCCAAGGTTGCCCCGGAGGAGGTTCGTACGGC
TCTCAACTTCTTCCTTCGTCCGGGTAATCCGTATGGAAACAAGCCCGCCC
CCAGGACGGTGGATGAACAGGGCAAGGCCCGTGGTAAGGGCAAGCGCAAG
GCGTCCTCGGCGGTGGTGCAGCTGGTCGAGGGTGAGGGTGAAGTGTTGGT
GAACGGAAAGACGCTGAACGAGGCTTTCCCTCGTCTACATGACCGTGAGA
GTGCTGTCTGGCCTCTTCGGTGTACGTCACGGCTCGACAAGTATAACGTG
TGGGCTACCGTTCGCGGTGGAGGAGTGACCGGTCAGGCGGAGGCTATTAC
ATTGGCTGTTGCACGGGCTCTGCTGGTTCACGAACCTGCTCTTAAGCCTA
TCCTGCGGAAGGCTGGTGTGGTTACCGTGGATGCCCGTCGTGTGGAGAGA
AAGAAGCCCGGTCATGTCAAGGCCCGCAAGATGCCCACTTGGGTCAAGCG
GTGAATGGCCTGGCAAAGCCCCAATGGCCTTGTGCACGCCATGCACTCCA
TCCGTCGAACTGCTCAATTGCGGCCTTTTGTCCAGCGCTCCGTGATCTCC
GCATCATCCCCGGTCTCCTCTCCCTCCACGCCGGCTCTCCTCCAGCAATA
CAAGAATGCCCGCAGCTATGCGACAGAACTACAACCCGTTGCTGCTCCCC
CCATTGAGTTCTCCAAATTCCAGATCCAGCCTGCCCGCATTATCCCCGTG
TCGCCGGCCTACTTCTCCGGCAGCCCCAAGTTCTTCGACCACATGCTGAA
GCTGGAAGCCCTTCTGGCCAAGTATGCCGCACTACCCACGGTGTCTCCTA
GCGAAGCCCCCAGAATGGCCTGGTTCAAGCTGCTTCAGTTCCGTGATGCC
GTGGGCGAGCCCGTCCCGACCAAGAAGTACAAGGGCCTCATCAAGCTCCT
GCAGCGTCTCAACCGCATCGACCCCAAGGTTGCCCCGGAGGAGGTTCGTA
CGGCTCTCAACTTCTTCCTTCGTCCGGGTAATCCGTATGGAAACAAGCCC
GCCCCCAGGACGGTGGATGAACAGGGCAAGGCCCGTGGTAAGGGCAAGCG
CAAGGCGTCCTCGGCGGTGGTGCAGCTGGTCGAGGGTGAGGGTGAAGTGT
TGGTGAACGGAAAGACGCTGAACGAGGCTTTCCCTCGTCTACATGACCGT
GAGAGTGCTGTCTGGCCTCTTCGGTGTACGTCACGGCTCGACAAGTATAA
CGTGTGGGCTACCGTTCGCGGTGGAGGAGTGACCGGTCAGGCGGAGGCTA
TTACATTGGCTGTTGCACGGGCTCTGCTGGTTCACGAACCTGCTCTTAAG
CCTATCCTGCGGAAGGCTGGTGTGGTTACCGTGGATGCCCGTCGTGTGGA
GAGAAAGAAGCCCGGTCATGTCAAGGCCCGCAAGATGCCCACTTGGGTCA
AGCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003848KJC3_003848Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003848-T1.utr5p1KJC3_003848-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003848-T1.exon1KJC3_003848-T1.exon1Aspergillus niger KJC3exon
KJC3_003848-T1.exon2KJC3_003848-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003848-T1.cdsKJC3_003848-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003848-T1.utr3p1KJC3_003848-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003848-T1KJC3_003848-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263K05
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020574
DBxrefInterPro:IPR000754
DBxrefInterPro:IPR014721
DBxrefPFAM:PF00380
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3216309..3218767 +
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