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KJC3_003856-T1, KJC3_003856-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003856-T1
Unique NameKJC3_003856-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3243102..3243978-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003856-T1 ID=KJC3_003856-T1|Name=KJC3_003856-T1|organism=Aspergillus niger KJC3|type=mRNA|length=877bp|location=Sequence derived from alignment at ch3:3243102..3243978- (Aspergillus niger KJC3)
ATGGATCATTCCAGCGAACCCAACAACGCGGCCCTTTACGATGCGCGGAG
ACGCAGGGGCTCCGTCGGAACTTCTCAGCTCTTCGACAACATTGTGTCCG
CCTCCAACTGTGGGTAGCGGTCGCGTTTAGTAACAATATCAATCGGGGTG
TCCGGGCTTGCTGACTACATCATCGGAATCTGGCAGTCGATCGCGATGAA
GTGGACCGTCTCCGCAAGCGCTTTATGAAGCTTGATAAGGTACTCCCCCA
TTCTCCACGTTATCCTCCCTCCCATATCTAGAGCTAACCATAATGTGAAT
GCATACAGGACAGCTCCGGCACCATCGACCGCGATGAATTCCTCTCCCTT
CCTCAAGTCTCCTCCAACCCGCTCGCCACGAGGTACTTTCCCCCATACTA
CCTCCCAACAACAATTACACCCAAATACAAAGGACGGAATAATAACCAAA
TAAAATGAAATGAACAGAATGATTGCCATTTTCGACGAAGACGGCGGCGG
CGATGTCGACTTCCAAGAATTCGTCTCCGGGTTATCAGCCTTCAGTTCCA
AGGGCAACAAAGAAGAGAAGCTGCGCTTCGCATTCAAAGTGTACGATATC
GATCGCGACGGGTTTATCTCCAATGGCGAATTGTTCATCGTGCTGAAGAT
GATGGTCGGCAATAACTTGAAGGATGTGCAGTTGCAGCAGATTGTCGACA
AGACGATCATGGAGGCCGATAAGGATGGTGATGGCAAGATTAGCTTCGAG
GAGTTTACGGATATGGTCGAGAACACGGATGTTAGTTTGAGTATGACGTT
GAGTATGTTCCCTGATACACCACTTCTACACTTTTGGGGGCTGATGGGTT
GCTGACTGTTTTGTAGACCAGATCTGA
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Coding sequence (CDS) from alignment at ch3:3243102..3243978-

>KJC3_003856-T1 ID=KJC3_003856-T1|Name=KJC3_003856-T1|organism=Aspergillus niger KJC3|type=CDS|length=2910bp|location=Sequence derived from alignment at ch3:3243102..3243978- (Aspergillus niger KJC3)
ACCAGATCTGAAATGATTGCCATTTTCGACGAAGACGGCGGCGGCGATGT
CGACTTCCAAGAATTCGTCTCCGGGTTATCAGCCTTCAGTTCCAAGGGCA
ACAAAGAAGAGAAGCTGCGCTTCGCATTCAAAGTGTACGATATCGATCGC
GACGGGTTTATCTCCAATGGCGAATTGTTCATCGTGCTGAAGATGATGGT
CGGCAATAACTTGAAGGATGTGCAGTTGCAGCAGATTGTCGACAAGACGA
TCATGGAGGCCGATAAGGATGGTGATGGCAAGATTAGCTTCGAGGAGTTT
ACGGATATGGTCGAGAACACGGATGTTAGTTTGAGTATGACGTTGAGACA
GCTCCGGCACCATCGACCGCGATGAATTCCTCTCCCTTCCTCAAGTCTCC
TCCAACCCGCTCGCCACGAGTCGATCGCGATGAAGTGGACCGTCTCCGCA
AGCGCTTTATGAAGCTTGATAAGATGGATCATTCCAGCGAACCCAACAAC
GCGGCCCTTTACGATGCGCGGAGACGCAGGGGCTCCGTCGGAACTTCTCA
GCTCTTCGACAACATTGTGTCCGCCTCCAACTACCAGATCTGAAATGATT
GCCATTTTCGACGAAGACGGCGGCGGCGATGTCGACTTCCAAGAATTCGT
CTCCGGGTTATCAGCCTTCAGTTCCAAGGGCAACAAAGAAGAGAAGCTGC
GCTTCGCATTCAAAGTGTACGATATCGATCGCGACGGGTTTATCTCCAAT
GGCGAATTGTTCATCGTGCTGAAGATGATGGTCGGCAATAACTTGAAGGA
TGTGCAGTTGCAGCAGATTGTCGACAAGACGATCATGGAGGCCGATAAGG
ATGGTGATGGCAAGATTAGCTTCGAGGAGTTTACGGATATGGTCGAGAAC
ACGGATGTTAGTTTGAGTATGACGTTGAGACAGCTCCGGCACCATCGACC
GCGATGAATTCCTCTCCCTTCCTCAAGTCTCCTCCAACCCGCTCGCCACG
AGTCGATCGCGATGAAGTGGACCGTCTCCGCAAGCGCTTTATGAAGCTTG
ATAAGATGGATCATTCCAGCGAACCCAACAACGCGGCCCTTTACGATGCG
CGGAGACGCAGGGGCTCCGTCGGAACTTCTCAGCTCTTCGACAACATTGT
GTCCGCCTCCAACTACCAGATCTGAAATGATTGCCATTTTCGACGAAGAC
GGCGGCGGCGATGTCGACTTCCAAGAATTCGTCTCCGGGTTATCAGCCTT
CAGTTCCAAGGGCAACAAAGAAGAGAAGCTGCGCTTCGCATTCAAAGTGT
ACGATATCGATCGCGACGGGTTTATCTCCAATGGCGAATTGTTCATCGTG
CTGAAGATGATGGTCGGCAATAACTTGAAGGATGTGCAGTTGCAGCAGAT
TGTCGACAAGACGATCATGGAGGCCGATAAGGATGGTGATGGCAAGATTA
GCTTCGAGGAGTTTACGGATATGGTCGAGAACACGGATGTTAGTTTGAGT
ATGACGTTGAGACAGCTCCGGCACCATCGACCGCGATGAATTCCTCTCCC
TTCCTCAAGTCTCCTCCAACCCGCTCGCCACGAGTCGATCGCGATGAAGT
GGACCGTCTCCGCAAGCGCTTTATGAAGCTTGATAAGATGGATCATTCCA
GCGAACCCAACAACGCGGCCCTTTACGATGCGCGGAGACGCAGGGGCTCC
GTCGGAACTTCTCAGCTCTTCGACAACATTGTGTCCGCCTCCAACTACCA
GATCTGAAATGATTGCCATTTTCGACGAAGACGGCGGCGGCGATGTCGAC
TTCCAAGAATTCGTCTCCGGGTTATCAGCCTTCAGTTCCAAGGGCAACAA
AGAAGAGAAGCTGCGCTTCGCATTCAAAGTGTACGATATCGATCGCGACG
GGTTTATCTCCAATGGCGAATTGTTCATCGTGCTGAAGATGATGGTCGGC
AATAACTTGAAGGATGTGCAGTTGCAGCAGATTGTCGACAAGACGATCAT
GGAGGCCGATAAGGATGGTGATGGCAAGATTAGCTTCGAGGAGTTTACGG
ATATGGTCGAGAACACGGATGTTAGTTTGAGTATGACGTTGAGACAGCTC
CGGCACCATCGACCGCGATGAATTCCTCTCCCTTCCTCAAGTCTCCTCCA
ACCCGCTCGCCACGAGTCGATCGCGATGAAGTGGACCGTCTCCGCAAGCG
CTTTATGAAGCTTGATAAGATGGATCATTCCAGCGAACCCAACAACGCGG
CCCTTTACGATGCGCGGAGACGCAGGGGCTCCGTCGGAACTTCTCAGCTC
TTCGACAACATTGTGTCCGCCTCCAACTACCAGATCTGAAATGATTGCCA
TTTTCGACGAAGACGGCGGCGGCGATGTCGACTTCCAAGAATTCGTCTCC
GGGTTATCAGCCTTCAGTTCCAAGGGCAACAAAGAAGAGAAGCTGCGCTT
CGCATTCAAAGTGTACGATATCGATCGCGACGGGTTTATCTCCAATGGCG
AATTGTTCATCGTGCTGAAGATGATGGTCGGCAATAACTTGAAGGATGTG
CAGTTGCAGCAGATTGTCGACAAGACGATCATGGAGGCCGATAAGGATGG
TGATGGCAAGATTAGCTTCGAGGAGTTTACGGATATGGTCGAGAACACGG
ATGTTAGTTTGAGTATGACGTTGAGACAGCTCCGGCACCATCGACCGCGA
TGAATTCCTCTCCCTTCCTCAAGTCTCCTCCAACCCGCTCGCCACGAGTC
GATCGCGATGAAGTGGACCGTCTCCGCAAGCGCTTTATGAAGCTTGATAA
GATGGATCATTCCAGCGAACCCAACAACGCGGCCCTTTACGATGCGCGGA
GACGCAGGGGCTCCGTCGGAACTTCTCAGCTCTTCGACAACATTGTGTCC
GCCTCCAACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CNB1KJC3_003856Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003856-T1KJC3_003856-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003856-T1.cdsKJC3_003856-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003856-T1.exon5KJC3_003856-T1.exon5Aspergillus niger KJC3exon
KJC3_003856-T1.exon4KJC3_003856-T1.exon4Aspergillus niger KJC3exon
KJC3_003856-T1.exon3KJC3_003856-T1.exon3Aspergillus niger KJC3exon
KJC3_003856-T1.exon2KJC3_003856-T1.exon2Aspergillus niger KJC3exon
KJC3_003856-T1.exon1KJC3_003856-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR002048
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
DBxrefPFAM:PF13202
DBxrefPFAM:PF00036
ProductCalcineurin subunit B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3243102..3243978 -
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