|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3251269..3252797- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003860-T1 ID=KJC3_003860-T1|Name=KJC3_003860-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1529bp|location=Sequence derived from alignment at ch3:3251269..3252797- (Aspergillus niger KJC3)
ATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTC
GGCTCCCTCGGCCGCGGCGGGGGACAAGAAAGTAGCTCGCCGGTCATCGA
TTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCC
ACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGT
TCAGCAGCGTCTACAATCCCGCAATGTCACGGATCTACCGACGCGGAATC
TAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAA
GACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCG
GGCGGCCGCAAAACGTGACCCTGTAGCACCCTCGGGCCCTCCTCCCCATG
CCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTG
CCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGA
GGATTCGTATATGGGATCGGTTGCACCCGACCATTTGTTGGATGAACACC
ACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAA
GCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGT
GCCAACCTTGATAGAGTGGACTGCCCCTGGTGATAAGGTCTACGTTACGG
GAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATCGGAGGTATGCC
ATGCTGCCTCATCCACTGTCTCATATGTCCAGGCGCATTACTTGTTATCT
GGGCTGTTGTACGTTACTAGAACTAACTGGAACCTTGCATAAACAGTGAG
AACAACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACCCA
TCATTTGAAATTCATTGTCAATGGTGAAATGCGCGCTTCAGATAACCTCC
CCACGGCAGTCGATTTCACGAACCACCTTGTCAACTATATTGAAATCAGT
GCTGATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGATGG
CGTTCGACCCCCGCAGGTCATTCCTGGGCCGGTCGGGAACGATCAAGTGG
GGTCCACCGTGGAGGAACAGTCAGACAGAGAGGAGCCAGAGGAGATCCCG
CTTGGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGACCG
CGAGGAAGAAACACCAGAGTACCAGCAAGCTGTGAATATCGTTGGGGATG
CGCCTACACCGCCGAGTCTTCCGCTGTTCCTCGGCAAATCAATCTTGAAC
GGCACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAACCA
CACCGTCCTAAATCATCTTGCTACTAGCAGTATCAAGAATGGTGTGCTTG
CCACCAGCGTAACGACTCGCTACAAACGGAAGGTAAGTTGGCACCTCTTT
GTCACGGACTCACAGAACTAATGGTATGTAGTACGTCACAACGATATTGT
ACAAACCGACAGGTGATATTACGGATTAG back to topCoding sequence (CDS) from alignment at ch3:3251269..3252797- >KJC3_003860-T1 ID=KJC3_003860-T1|Name=KJC3_003860-T1|organism=Aspergillus niger KJC3|type=CDS|length=4131bp|location=Sequence derived from alignment at ch3:3251269..3252797- (Aspergillus niger KJC3)
TACGTCACAACGATATTGTACAAACCGACAGGTGATATTACGGATTAGTG
AGAACAACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGGCACC
CATCATTTGAAATTCATTGTCAATGGTGAAATGCGCGCTTCAGATAACCT
CCCCACGGCAGTCGATTTCACGAACCACCTTGTCAACTATATTGAAATCA
GTGCTGATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCCTGAT
GGCGTTCGACCCCCGCAGGTCATTCCTGGGCCGGTCGGGAACGATCAAGT
GGGGTCCACCGTGGAGGAACAGTCAGACAGAGAGGAGCCAGAGGAGATCC
CGCTTGGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCTAGAC
CGCGAGGAAGAAACACCAGAGTACCAGCAAGCTGTGAATATCGTTGGGGA
TGCGCCTACACCGCCGAGTCTTCCGCTGTTCCTCGGCAAATCAATCTTGA
ACGGCACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCCTAAC
CACACCGTCCTAAATCATCTTGCTACTAGCAGTATCAAGAATGGTGTGCT
TGCCACCAGCGTAACGACTCGCTACAAACGGAAGATGGGCAACAATCCTT
CCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGCCGCG
GCGGGGGACAAGAAAGTAGCTCGCCGGTCATCGATTCATACACCATCGGG
CACCACCAAGGCTTCCGCAGCCGACCCCTCCGCCACTAGAGAAACCGCAA
CGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCTACAA
TCCCGCAATGTCACGGATCTACCGACGCGGAATCTAGATCGGCCAGACCG
TCAGGTCCCGAAGAAACCAGATACTCGCTCCAAAGACATTCCTGCCCCTG
ATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAAACGT
GACCCTGTAGCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTGCTTC
TGTTCATCTTCAACGCCCACCGCGCATGCCTCTGCCCATTGGAGATGCCA
CAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATATGGGA
TCGGTTGCACCCGACCATTTGTTGGATGAACACCACCAGTCGAGACAATC
TGCCGTTAGTGGCGCCACGGTCGATGACGATGAAGCATTGGATGAACTTC
AACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGATAGAG
TGGACTGCCCCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGAACTG
GGAAAAGAAATTCCGTCTACATCGGAGTACGTCACAACGATATTGTACAA
ACCGACAGGTGATATTACGGATTAGTGAGAACAACCCCGGTGTCTTGTCT
ACGAGATTGAACCTCCGCCCGGGCACCCATCATTTGAAATTCATTGTCAA
TGGTGAAATGCGCGCTTCAGATAACCTCCCCACGGCAGTCGATTTCACGA
ACCACCTTGTCAACTATATTGAAATCAGTGCTGATGATGTCAACCGGTCA
CGGAGGGAAAGCGATAAGGTCCCTGATGGCGTTCGACCCCCGCAGGTCAT
TCCTGGGCCGGTCGGGAACGATCAAGTGGGGTCCACCGTGGAGGAACAGT
CAGACAGAGAGGAGCCAGAGGAGATCCCGCTTGGTGACTTCCGTGGTGTT
ATTCCCCAATTTCTGCTTGATCTAGACCGCGAGGAAGAAACACCAGAGTA
CCAGCAAGCTGTGAATATCGTTGGGGATGCGCCTACACCGCCGAGTCTTC
CGCTGTTCCTCGGCAAATCAATCTTGAACGGCACCACACCCATGAAGGAC
GATAGCAGCGTTCTTAACTACCCTAACCACACCGTCCTAAATCATCTTGC
TACTAGCAGTATCAAGAATGGTGTGCTTGCCACCAGCGTAACGACTCGCT
ACAAACGGAAGATGGGCAACAATCCTTCCAAACCCCCTGCCGGAGATGCC
CAATCGCCGTCGGCTCCCTCGGCCGCGGCGGGGGACAAGAAAGTAGCTCG
CCGGTCATCGATTCATACACCATCGGGCACCACCAAGGCTTCCGCAGCCG
ACCCCTCCGCCACTAGAGAAACCGCAACGGGCCACCCGACCTCCCAAGCT
CAACCATCCGTTCAGCAGCGTCTACAATCCCGCAATGTCACGGATCTACC
GACGCGGAATCTAGATCGGCCAGACCGTCAGGTCCCGAAGAAACCAGATA
CTCGCTCCAAAGACATTCCTGCCCCTGATCCGTCCAACCCCGTTCAAGTT
CCGGGTTCTCGGGCGGCCGCAAAACGTGACCCTGTAGCACCCTCGGGCCC
TCCTCCCCATGCCTATTACAGTGCTTCTGTTCATCTTCAACGCCCACCGC
GCATGCCTCTGCCCATTGGAGATGCCACAGCCACCCCTGGTTCGCCTATT
ATTGGTCCGGAGGATTCGTATATGGGATCGGTTGCACCCGACCATTTGTT
GGATGAACACCACCAGTCGAGACAATCTGCCGTTAGTGGCGCCACGGTCG
ATGACGATGAAGCATTGGATGAACTTCAACCTTATACTCCGAGCGGCGTG
GGAAGAGCTGTGCCAACCTTGATAGAGTGGACTGCCCCTGGTGATAAGGT
CTACGTTACGGGAACGTTTGTGAACTGGGAAAAGAAATTCCGTCTACATC
GGAGTACGTCACAACGATATTGTACAAACCGACAGGTGATATTACGGATT
AGTGAGAACAACCCCGGTGTCTTGTCTACGAGATTGAACCTCCGCCCGGG
CACCCATCATTTGAAATTCATTGTCAATGGTGAAATGCGCGCTTCAGATA
ACCTCCCCACGGCAGTCGATTTCACGAACCACCTTGTCAACTATATTGAA
ATCAGTGCTGATGATGTCAACCGGTCACGGAGGGAAAGCGATAAGGTCCC
TGATGGCGTTCGACCCCCGCAGGTCATTCCTGGGCCGGTCGGGAACGATC
AAGTGGGGTCCACCGTGGAGGAACAGTCAGACAGAGAGGAGCCAGAGGAG
ATCCCGCTTGGTGACTTCCGTGGTGTTATTCCCCAATTTCTGCTTGATCT
AGACCGCGAGGAAGAAACACCAGAGTACCAGCAAGCTGTGAATATCGTTG
GGGATGCGCCTACACCGCCGAGTCTTCCGCTGTTCCTCGGCAAATCAATC
TTGAACGGCACCACACCCATGAAGGACGATAGCAGCGTTCTTAACTACCC
TAACCACACCGTCCTAAATCATCTTGCTACTAGCAGTATCAAGAATGGTG
TGCTTGCCACCAGCGTAACGACTCGCTACAAACGGAAGATGGGCAACAAT
CCTTCCAAACCCCCTGCCGGAGATGCCCAATCGCCGTCGGCTCCCTCGGC
CGCGGCGGGGGACAAGAAAGTAGCTCGCCGGTCATCGATTCATACACCAT
CGGGCACCACCAAGGCTTCCGCAGCCGACCCCTCCGCCACTAGAGAAACC
GCAACGGGCCACCCGACCTCCCAAGCTCAACCATCCGTTCAGCAGCGTCT
ACAATCCCGCAATGTCACGGATCTACCGACGCGGAATCTAGATCGGCCAG
ACCGTCAGGTCCCGAAGAAACCAGATACTCGCTCCAAAGACATTCCTGCC
CCTGATCCGTCCAACCCCGTTCAAGTTCCGGGTTCTCGGGCGGCCGCAAA
ACGTGACCCTGTAGCACCCTCGGGCCCTCCTCCCCATGCCTATTACAGTG
CTTCTGTTCATCTTCAACGCCCACCGCGCATGCCTCTGCCCATTGGAGAT
GCCACAGCCACCCCTGGTTCGCCTATTATTGGTCCGGAGGATTCGTATAT
GGGATCGGTTGCACCCGACCATTTGTTGGATGAACACCACCAGTCGAGAC
AATCTGCCGTTAGTGGCGCCACGGTCGATGACGATGAAGCATTGGATGAA
CTTCAACCTTATACTCCGAGCGGCGTGGGAAGAGCTGTGCCAACCTTGAT
AGAGTGGACTGCCCCTGGTGATAAGGTCTACGTTACGGGAACGTTTGTGA
ACTGGGAAAAGAAATTCCGTCTACATCGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037256 |
| DBxref | InterPro:IPR014756 |
| DBxref | InterPro:IPR013783 |
| DBxref | InterPro:IPR032640 |
| DBxref | InterPro:IPR006828 |
| DBxref | PFAM:PF04739 |
| DBxref | PFAM:PF16561 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3251269..3252797 - |
|
