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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3255946..3259654- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003863-T1 ID=KJC3_003863-T1|Name=KJC3_003863-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3709bp|location=Sequence derived from alignment at ch3:3255946..3259654- (Aspergillus niger KJC3)
CTTTTCGAGGCACGAGATGCTATCCGGCTTGCTCTCGCGCTCCTCCAATT
GCTTCATTTTCCATCATGCGAAGACGGTAGTTTGGAGACCAGCCCGGGTT
TCTCTGCTACTTTACCAATCATGTCGGGCAAGCGTCTGTTGGACACGATC
CAACTCTTCAATGTCGCCAAGTCTGTGGCCGTGAAGCACCTCGAGGTGCG
GCAGCGCCAGCTAGACTTATTTACCAGGACTTCGTCCCTCACCAAAGGCA
TCAAAAGCCAAGCGGATGGCCTCTGTATGACCGCACAAGCTGCGGCAGCC
CTAGCAAAGCGGTTCAATGATGATCCTTCTCCCCCACAATCGGCATCCGC
ACCGCCACCCCGGTCCCCGAGCTCATCCCCCACGCACACGAATCTCTCCC
CGGATGAGGCCAGGAAAGCGCAACGACAGGCAGAGTCACAGATCCCGTCG
TCTACAGCAGAGACCACCGGTTACGGAGCTAGTCAATTGGATGTTAGCCA
GCAGCAAGATGTGTTCTATGAACCCTCCACACACACAACCCCCGGCTCGT
CTGGTCTTCCTAGGGTTAAGCTACCTAAGACATCCAGCGACACGCAAACA
GGCATCAACACTGAAATCAATGCGGACGTATTCCACTCCCCCGTCGGTGC
CGAGAAAGCCGCGTCCGCAACCCAGCCTACGGAACAACAGGAGGAGATTT
CGGAGGATATGATGAAGGAGATATTCCACAGCCCCAAGGTTGCTAGGATG
CTATCTCGGCAAGCTGCTGCGGATCTCAGATACAAAGGAAGGACCCCGAC
GCCTCCACCTGACGTCAAACCCATCGGGAAGGAGGGACTGTCGAAAGAAG
AGGCCGAGGTGGTGGATGACATTGTGACAACAACAGCAGTAAGTGCAAGC
AGCCGCAAGCAACTGGAAGTCTATATCTAAAAAAGTGCCCGCAGGTGGAA
CCTGAGACTGCCGCAGCTATGAAGCAGCAGGCAACGTACCAGATGATTGA
GTCTCGCGTTCCAGCTTCCCGACTAGGCAGGCTATGGCAATACGGTGGCC
TAGCCACATCCATGGCCTTTGGCGCCGTCAGCGAAAGCCTCCGACGAGCC
ACAGGGAGCCAATCCGAAAGCACCGGGTCCCTCATGTTCAGCGCAGGGAA
CATGGAACGTCTCGTAGCCAAACTCTCCAAGATGCGTGGGGCGGCCCTCA
AGCTGGGGCAGATGCTGAGCATCCAAGGTACACACCATCTAACCCCTAAA
CCAACCTCCCTCTAACACCCCCCTCCAGACAGCAAAATGCTCCCCGACTC
CATTCACGAGGTCCTCCAACGAGTCCAAGATCGCGCAGACTACATGCCCG
CCTCGCAACGCGACAAAGTCCTGACCGACAATCTCGGTCCCAACTGGCGC
GACCTCTTCTCCTCCTTCGACGAAATCCCCATGGCAGCCGCCTCCATCGG
CCAGGTCCACGGCGCTGTCCTCGCCTCCACGGGACAACCGGTCGCCGTCA
AAATCCAATACCCAGGCGTAGCCGACTCCATCGACTCCGACCTCAACAAC
CTCTCCATCCTCCTAACCGCCTCCCGCCTCCTCCCACGCGGCCTCTACCT
TGACAAAACCATCGCCAACGCCCGCACCGAACTCGCCTGGGAATGCGACT
ACCACCGCGAAGCCACCTGCGGCGAGCACTTCCGCTCGCTCCTCGCCGAC
GACCCCGTCTTCCACATCCCCGCCATCATCCCCGAAGCCTCGGGCAAACA
AGTCCTCACAATGGAACGTCTCAACGGCATCGCCGTCACCAAAATCCAAA
CCTTCACCCAATCCCAACGCGACTGGATCGGCACCCAAATCCTCCGCCTG
TGTCTTCGCGAAATCACCGAATTCAAATACATGCAGACGGACCCCAACTG
GACTAACTTCCTCTACAACGCCGAGACGAACCGGCTCGAACTGCTTGATT
TCGGCGCTTCGCGCGAATACCCCGATGAGTTCATCACTAAGTATGTGAAC
ACGCTGATCGCGGCAGCGAGGAACGATCGTCTACGCTGTGCGGAGCTGTC
CCGCGAACTGGGATATCTTACTGGCCATGAGAGTCAGGAGATGGTCGATG
CGCACGTTACTTCCGTTATTACTATTGCAGAGCCGTTCATGGAGTCGTCG
CCGGATGTGTATGACTTCAGAAATCAAACTATTACGGATCGTGTGAGGGG
GTTGATTCCCCTTATGATTCGGGAGAGGTTGACGCCTCCGCCGGAGGAGA
CGTATAGTTTGCATCGGAAGTTGAGTGGGGCGTTTTTGTTGTGCGCGAGG
TTGGGCAGTCGAGTGCCATGTAAGGAGTTATTTAGGGAGGCGGTTAGGAA
GGCGCAGGTTGCGGGAACTATTGAGAAGGTGTGATTATCTATTAGGGGGA
GTGTGTATTTTCAGGGGGTTGTGGAGGAGGTATATGATTCTCTTCTCTGG
ATTGTATCATTAGCTTAGATTGTATGTATAGAGATTTACATCAACGGGTT
TGTATTTATAGTAGTGTGGTGTGGTGTAGCTCTGCATGGGTATTGGTATA
TGATACATGAAAAGAAGCAAGGCTGGTGGCATGGCATGACATGGCGTGGT
GAGTATCTGTATGTTGTCGAGGATGAAAAGGTTAGGGTCCTAATTTCTGA
AATAGTCTGTGGTATATGTAGTAAAGAATGTATCCAAGGCTGGTGGTCCA
AGGTATCTTGATTCGTGTGTCTTTGATGGGACGTGGGCGTAGGTATGTCG
CTCTGATTGCTTAATATAAGCCAATCGTCTTCGTCACTTCGTGTCTCGTT
GAAGATCGTTCATAAGCGACCAGCGCTAAGGCTGAAACTCGGGAACCCGA
CCCTAACTCAACGAGAATGCCCGATACCGAACATGGCGTTCCAATAGTTC
TTCACCCCCTTGCAGATGCCCTTCTTGTCCTTCCAAGTACTGAATTTATC
CTCGAGTTCGCACGCCGTCCAAAGAATCTCGTCCCAGAAGCGCTTTTCGA
CATCGGTGCCAAAGGCCTTAATTACTTCGTTGGGAATCGTCCATGCGCGC
GTATAGCTCCCGTCATCTGCAAAAGCCGGGTTCACGGCCTGTTTGTCGAA
CACTGTGGCCGGGTTGAACTTGGGGAAGTTGGCGTGAATAAAGAATGCTC
GGGGGGCGGGCGCCTTCGACCCATGAACCCGCCACTCGCCCTTCTGCGTC
AGAGCATAGTCCTCGATTGGATCGAACTGCACCATCGCCGAGCCGGCCAG
ACCGCCCTGTGTGCCGTGGCCGATGGCGCAAATTGGCTCCGAGACCTGGT
AGTATGGCTCTTGCAGGGTCATGGCGGCTGCGACGAAGGTTTCTTTATCG
CCTTCCCCAGCTGCGCCTTGCGAAAGCAATGGGTAGTAGAAATCGGGACC
CCACATGTTATAGTAGGTGCTTAGGAGAAGGGTTTTCATGTGCGTCTTCT
TGGATATCAAAACCTCCCCGGATTCGCTGGACTGTCGGACTGAGTTCTCA
GGATATGGCTGAGAGGCGATTTCATAGTAGTAGGAGGAAACGGTGGATGC
CCAGAAGTCAGGCCAAGTGACCATGTTCGTCGAGGGAAAGGGCCCATTGA
CGAATAGCATTTCCGGTGGGTGAAGCGGGAACGCATCGGCGTCTAAGAAG
AGAATTTCTTCAAAAGACGAGAACAGCATTGCGAGAAGCTTGAATTGGTA
TTTCTCGAC back to topCoding sequence (CDS) from alignment at ch3:3255946..3259654- >KJC3_003863-T1 ID=KJC3_003863-T1|Name=KJC3_003863-T1|organism=Aspergillus niger KJC3|type=CDS|length=6471bp|location=Sequence derived from alignment at ch3:3255946..3259654- (Aspergillus niger KJC3)
ACAGCAAAATGCTCCCCGACTCCATTCACGAGGTCCTCCAACGAGTCCAA
GATCGCGCAGACTACATGCCCGCCTCGCAACGCGACAAAGTCCTGACCGA
CAATCTCGGTCCCAACTGGCGCGACCTCTTCTCCTCCTTCGACGAAATCC
CCATGGCAGCCGCCTCCATCGGCCAGGTCCACGGCGCTGTCCTCGCCTCC
ACGGGACAACCGGTCGCCGTCAAAATCCAATACCCAGGCGTAGCCGACTC
CATCGACTCCGACCTCAACAACCTCTCCATCCTCCTAACCGCCTCCCGCC
TCCTCCCACGCGGCCTCTACCTTGACAAAACCATCGCCAACGCCCGCACC
GAACTCGCCTGGGAATGCGACTACCACCGCGAAGCCACCTGCGGCGAGCA
CTTCCGCTCGCTCCTCGCCGACGACCCCGTCTTCCACATCCCCGCCATCA
TCCCCGAAGCCTCGGGCAAACAAGTCCTCACAATGGAACGTCTCAACGGC
ATCGCCGTCACCAAAATCCAAACCTTCACCCAATCCCAACGCGACTGGAT
CGGCACCCAAATCCTCCGCCTGTGTCTTCGCGAAATCACCGAATTCAAAT
ACATGCAGACGGACCCCAACTGGACTAACTTCCTCTACAACGCCGAGACG
AACCGGCTCGAACTGCTTGATTTCGGCGCTTCGCGCGAATACCCCGATGA
GTTCATCACTAAGTATGTGAACACGCTGATCGCGGCAGCGAGGAACGATC
GTCTACGCTGTGCGGAGCTGTCCCGCGAACTGGGATATCTTACTGGCCAT
GAGAGTCAGGAGATGGTCGATGCGCACGTTACTTCCGTTATTACTATTGC
AGAGCCGTTCATGGAGTCGTCGCCGGATGTGTATGACTTCAGAAATCAAA
CTATTACGGATCGTGTGAGGGGGTTGATTCCCCTTATGATTCGGGAGAGG
TTGACGCCTCCGCCGGAGGAGACGTATAGTTTGCATCGGAAGTTGAGTGG
GGCGTTTTTGTTGTGCGCGAGGTTGGGCAGTCGAGTGCCATGTAAGGAGT
TATTTAGGGAGGCGGTTAGGAAGGCGCAGGTTGCGGGAACTATTGAGAAG
GTGTGAGTGGAACCTGAGACTGCCGCAGCTATGAAGCAGCAGGCAACGTA
CCAGATGATTGAGTCTCGCGTTCCAGCTTCCCGACTAGGCAGGCTATGGC
AATACGGTGGCCTAGCCACATCCATGGCCTTTGGCGCCGTCAGCGAAAGC
CTCCGACGAGCCACAGGGAGCCAATCCGAAAGCACCGGGTCCCTCATGTT
CAGCGCAGGGAACATGGAACGTCTCGTAGCCAAACTCTCCAAGATGCGTG
GGGCGGCCCTCAAGCTGGGGCAGATGCTGAGCATCCAAGATGTCGGGCAA
GCGTCTGTTGGACACGATCCAACTCTTCAATGTCGCCAAGTCTGTGGCCG
TGAAGCACCTCGAGGTGCGGCAGCGCCAGCTAGACTTATTTACCAGGACT
TCGTCCCTCACCAAAGGCATCAAAAGCCAAGCGGATGGCCTCTGTATGAC
CGCACAAGCTGCGGCAGCCCTAGCAAAGCGGTTCAATGATGATCCTTCTC
CCCCACAATCGGCATCCGCACCGCCACCCCGGTCCCCGAGCTCATCCCCC
ACGCACACGAATCTCTCCCCGGATGAGGCCAGGAAAGCGCAACGACAGGC
AGAGTCACAGATCCCGTCGTCTACAGCAGAGACCACCGGTTACGGAGCTA
GTCAATTGGATGTTAGCCAGCAGCAAGATGTGTTCTATGAACCCTCCACA
CACACAACCCCCGGCTCGTCTGGTCTTCCTAGGGTTAAGCTACCTAAGAC
ATCCAGCGACACGCAAACAGGCATCAACACTGAAATCAATGCGGACGTAT
TCCACTCCCCCGTCGGTGCCGAGAAAGCCGCGTCCGCAACCCAGCCTACG
GAACAACAGGAGGAGATTTCGGAGGATATGATGAAGGAGATATTCCACAG
CCCCAAGGTTGCTAGGATGCTATCTCGGCAAGCTGCTGCGGATCTCAGAT
ACAAAGGAAGGACCCCGACGCCTCCACCTGACGTCAAACCCATCGGGAAG
GAGGGACTGTCGAAAGAAGAGGCCGAGGTGGTGGATGACATTGTGACAAC
AACAGCAACAGCAAAATGCTCCCCGACTCCATTCACGAGGTCCTCCAACG
AGTCCAAGATCGCGCAGACTACATGCCCGCCTCGCAACGCGACAAAGTCC
TGACCGACAATCTCGGTCCCAACTGGCGCGACCTCTTCTCCTCCTTCGAC
GAAATCCCCATGGCAGCCGCCTCCATCGGCCAGGTCCACGGCGCTGTCCT
CGCCTCCACGGGACAACCGGTCGCCGTCAAAATCCAATACCCAGGCGTAG
CCGACTCCATCGACTCCGACCTCAACAACCTCTCCATCCTCCTAACCGCC
TCCCGCCTCCTCCCACGCGGCCTCTACCTTGACAAAACCATCGCCAACGC
CCGCACCGAACTCGCCTGGGAATGCGACTACCACCGCGAAGCCACCTGCG
GCGAGCACTTCCGCTCGCTCCTCGCCGACGACCCCGTCTTCCACATCCCC
GCCATCATCCCCGAAGCCTCGGGCAAACAAGTCCTCACAATGGAACGTCT
CAACGGCATCGCCGTCACCAAAATCCAAACCTTCACCCAATCCCAACGCG
ACTGGATCGGCACCCAAATCCTCCGCCTGTGTCTTCGCGAAATCACCGAA
TTCAAATACATGCAGACGGACCCCAACTGGACTAACTTCCTCTACAACGC
CGAGACGAACCGGCTCGAACTGCTTGATTTCGGCGCTTCGCGCGAATACC
CCGATGAGTTCATCACTAAGTATGTGAACACGCTGATCGCGGCAGCGAGG
AACGATCGTCTACGCTGTGCGGAGCTGTCCCGCGAACTGGGATATCTTAC
TGGCCATGAGAGTCAGGAGATGGTCGATGCGCACGTTACTTCCGTTATTA
CTATTGCAGAGCCGTTCATGGAGTCGTCGCCGGATGTGTATGACTTCAGA
AATCAAACTATTACGGATCGTGTGAGGGGGTTGATTCCCCTTATGATTCG
GGAGAGGTTGACGCCTCCGCCGGAGGAGACGTATAGTTTGCATCGGAAGT
TGAGTGGGGCGTTTTTGTTGTGCGCGAGGTTGGGCAGTCGAGTGCCATGT
AAGGAGTTATTTAGGGAGGCGGTTAGGAAGGCGCAGGTTGCGGGAACTAT
TGAGAAGGTGTGAGTGGAACCTGAGACTGCCGCAGCTATGAAGCAGCAGG
CAACGTACCAGATGATTGAGTCTCGCGTTCCAGCTTCCCGACTAGGCAGG
CTATGGCAATACGGTGGCCTAGCCACATCCATGGCCTTTGGCGCCGTCAG
CGAAAGCCTCCGACGAGCCACAGGGAGCCAATCCGAAAGCACCGGGTCCC
TCATGTTCAGCGCAGGGAACATGGAACGTCTCGTAGCCAAACTCTCCAAG
ATGCGTGGGGCGGCCCTCAAGCTGGGGCAGATGCTGAGCATCCAAGATGT
CGGGCAAGCGTCTGTTGGACACGATCCAACTCTTCAATGTCGCCAAGTCT
GTGGCCGTGAAGCACCTCGAGGTGCGGCAGCGCCAGCTAGACTTATTTAC
CAGGACTTCGTCCCTCACCAAAGGCATCAAAAGCCAAGCGGATGGCCTCT
GTATGACCGCACAAGCTGCGGCAGCCCTAGCAAAGCGGTTCAATGATGAT
CCTTCTCCCCCACAATCGGCATCCGCACCGCCACCCCGGTCCCCGAGCTC
ATCCCCCACGCACACGAATCTCTCCCCGGATGAGGCCAGGAAAGCGCAAC
GACAGGCAGAGTCACAGATCCCGTCGTCTACAGCAGAGACCACCGGTTAC
GGAGCTAGTCAATTGGATGTTAGCCAGCAGCAAGATGTGTTCTATGAACC
CTCCACACACACAACCCCCGGCTCGTCTGGTCTTCCTAGGGTTAAGCTAC
CTAAGACATCCAGCGACACGCAAACAGGCATCAACACTGAAATCAATGCG
GACGTATTCCACTCCCCCGTCGGTGCCGAGAAAGCCGCGTCCGCAACCCA
GCCTACGGAACAACAGGAGGAGATTTCGGAGGATATGATGAAGGAGATAT
TCCACAGCCCCAAGGTTGCTAGGATGCTATCTCGGCAAGCTGCTGCGGAT
CTCAGATACAAAGGAAGGACCCCGACGCCTCCACCTGACGTCAAACCCAT
CGGGAAGGAGGGACTGTCGAAAGAAGAGGCCGAGGTGGTGGATGACATTG
TGACAACAACAGCAACAGCAAAATGCTCCCCGACTCCATTCACGAGGTCC
TCCAACGAGTCCAAGATCGCGCAGACTACATGCCCGCCTCGCAACGCGAC
AAAGTCCTGACCGACAATCTCGGTCCCAACTGGCGCGACCTCTTCTCCTC
CTTCGACGAAATCCCCATGGCAGCCGCCTCCATCGGCCAGGTCCACGGCG
CTGTCCTCGCCTCCACGGGACAACCGGTCGCCGTCAAAATCCAATACCCA
GGCGTAGCCGACTCCATCGACTCCGACCTCAACAACCTCTCCATCCTCCT
AACCGCCTCCCGCCTCCTCCCACGCGGCCTCTACCTTGACAAAACCATCG
CCAACGCCCGCACCGAACTCGCCTGGGAATGCGACTACCACCGCGAAGCC
ACCTGCGGCGAGCACTTCCGCTCGCTCCTCGCCGACGACCCCGTCTTCCA
CATCCCCGCCATCATCCCCGAAGCCTCGGGCAAACAAGTCCTCACAATGG
AACGTCTCAACGGCATCGCCGTCACCAAAATCCAAACCTTCACCCAATCC
CAACGCGACTGGATCGGCACCCAAATCCTCCGCCTGTGTCTTCGCGAAAT
CACCGAATTCAAATACATGCAGACGGACCCCAACTGGACTAACTTCCTCT
ACAACGCCGAGACGAACCGGCTCGAACTGCTTGATTTCGGCGCTTCGCGC
GAATACCCCGATGAGTTCATCACTAAGTATGTGAACACGCTGATCGCGGC
AGCGAGGAACGATCGTCTACGCTGTGCGGAGCTGTCCCGCGAACTGGGAT
ATCTTACTGGCCATGAGAGTCAGGAGATGGTCGATGCGCACGTTACTTCC
GTTATTACTATTGCAGAGCCGTTCATGGAGTCGTCGCCGGATGTGTATGA
CTTCAGAAATCAAACTATTACGGATCGTGTGAGGGGGTTGATTCCCCTTA
TGATTCGGGAGAGGTTGACGCCTCCGCCGGAGGAGACGTATAGTTTGCAT
CGGAAGTTGAGTGGGGCGTTTTTGTTGTGCGCGAGGTTGGGCAGTCGAGT
GCCATGTAAGGAGTTATTTAGGGAGGCGGTTAGGAAGGCGCAGGTTGCGG
GAACTATTGAGAAGGTGTGAGTGGAACCTGAGACTGCCGCAGCTATGAAG
CAGCAGGCAACGTACCAGATGATTGAGTCTCGCGTTCCAGCTTCCCGACT
AGGCAGGCTATGGCAATACGGTGGCCTAGCCACATCCATGGCCTTTGGCG
CCGTCAGCGAAAGCCTCCGACGAGCCACAGGGAGCCAATCCGAAAGCACC
GGGTCCCTCATGTTCAGCGCAGGGAACATGGAACGTCTCGTAGCCAAACT
CTCCAAGATGCGTGGGGCGGCCCTCAAGCTGGGGCAGATGCTGAGCATCC
AAGATGTCGGGCAAGCGTCTGTTGGACACGATCCAACTCTTCAATGTCGC
CAAGTCTGTGGCCGTGAAGCACCTCGAGGTGCGGCAGCGCCAGCTAGACT
TATTTACCAGGACTTCGTCCCTCACCAAAGGCATCAAAAGCCAAGCGGAT
GGCCTCTGTATGACCGCACAAGCTGCGGCAGCCCTAGCAAAGCGGTTCAA
TGATGATCCTTCTCCCCCACAATCGGCATCCGCACCGCCACCCCGGTCCC
CGAGCTCATCCCCCACGCACACGAATCTCTCCCCGGATGAGGCCAGGAAA
GCGCAACGACAGGCAGAGTCACAGATCCCGTCGTCTACAGCAGAGACCAC
CGGTTACGGAGCTAGTCAATTGGATGTTAGCCAGCAGCAAGATGTGTTCT
ATGAACCCTCCACACACACAACCCCCGGCTCGTCTGGTCTTCCTAGGGTT
AAGCTACCTAAGACATCCAGCGACACGCAAACAGGCATCAACACTGAAAT
CAATGCGGACGTATTCCACTCCCCCGTCGGTGCCGAGAAAGCCGCGTCCG
CAACCCAGCCTACGGAACAACAGGAGGAGATTTCGGAGGATATGATGAAG
GAGATATTCCACAGCCCCAAGGTTGCTAGGATGCTATCTCGGCAAGCTGC
TGCGGATCTCAGATACAAAGGAAGGACCCCGACGCCTCCACCTGACGTCA
AACCCATCGGGAAGGAGGGACTGTCGAAAGAAGAGGCCGAGGTGGTGGAT
GACATTGTGACAACAACAGCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003863-T1.utr5p1 | KJC3_003863-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262Z14 |
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR034646 |
| DBxref | InterPro:IPR004147 |
| DBxref | PFAM:PF03109 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3255946..3259654 - |
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